ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl09f09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor is... 301 7e-79
2gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor i... 295 5e-77
3emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 100 5e-18
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 100 5e-18
5dbj|AK065553.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 5e-18
6dbj|AK060761.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 5e-18
7emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 100 5e-18
8emb|AM156958.1| Oryza sativa (indica cultivar-group) mRNA for pu... 62 1e-06
9emb|AM156957.1| Oryza sativa (indica cultivar-group) mRNA for pu... 62 1e-06
10emb|AM156959.1| Oryza glaberrima mRNA for putative eukaryotic tr... 54 3e-04
11gb|AC151915.8| Medicago truncatula clone mth2-30n12, complete se... 46 0.070
12gb|AC151743.27| Medicago truncatula clone mth2-25e15, complete s... 46 0.070
13emb|CR847826.13| Zebrafish DNA sequence from clone CH211-204D2 i... 44 0.28
14ref|XM_949171.1| Theileria annulata strain Ankara ribosomal prot... 42 1.1
15emb|BX927394.14| Zebrafish DNA sequence from clone CH211-262I10 ... 42 1.1
16emb|Z69724.1|HSU85B5 Human DNA sequence from clone LL0XNC01-85B5... 42 1.1
17gb|BT016928.1| Zea mays clone E04912703C02.c mRNA sequence 40 4.3
18gb|AC140845.2| Mus musculus BAC clone RP24-386C13 from chromosom... 40 4.3
19gb|AC123554.3| Mus musculus BAC clone RP23-135A9 from chromosome... 40 4.3
20gb|AC128952.4| Rattus norvegicus 14 BAC CH230-510F9 (Children's ... 40 4.3
21emb|AL354692.23| Human DNA sequence from clone RP11-361M4 on chr... 40 4.3
22gb|AC099101.7| Rattus norvegicus 14 BAC CH230-186B23 (Children's... 40 4.3
23emb|CR855858.5| Zebrafish DNA sequence from clone CH211-113H5 in... 40 4.3
24emb|BX901883.5| Zebrafish DNA sequence from clone DKEY-151M15 in... 40 4.3
25emb|BX927134.11| Zebrafish DNA sequence from clone CH211-261C20 ... 40 4.3
26gb|AC008158.16| Homo sapiens chromosome 17, clone RP11-42F20, co... 40 4.3
27gb|AC084472.1|AC084472 Caenorhabditis briggsae cosmid CB048M21, ... 40 4.3
28emb|AL773512.6| Mouse DNA sequence from clone RP23-454N6 on chro... 40 4.3
29emb|AL935194.4| Zebrafish DNA sequence from clone CH211-237E12, ... 40 4.3
30emb|BX248390.7| Zebrafish DNA sequence from clone DKEY-34F16 in ... 40 4.3
31emb|CR751546.4| Zebrafish DNA sequence from clone CH211-53M6 in ... 40 4.3
32emb|BX640497.11| Zebrafish DNA sequence from clone CH211-108O9 i... 40 4.3
33emb|BX470128.8| Zebrafish DNA sequence from clone DKEY-19F21 in ... 40 4.3
34gb|AY110434.1| Zea mays CL533_2 mRNA sequence 40 4.3
35gb|AY109824.1| Zea mays CL533_1 mRNA sequence 40 4.3
36emb|AL161752.4|CNS01RHH Human chromosome 14 DNA sequence BAC R-9... 40 4.3
37emb|AL954703.8| Zebrafish DNA sequence from clone CH211-51I10 in... 40 4.3
38gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, compl... 40 4.3 
>gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor isozyme 4F p82 subunit mRNA
            sequence
          Length = 2863

 Score =  301 bits (152), Expect = 7e-79
 Identities = 158/160 (98%)
 Strand = Plus / Minus

                                                                        
Query: 18   aagccaaaataatcttagattcagttttcgactcctacaatgctgacacgatatattgta 77
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2863 aagccaaaatgatcttagattcagttttcgactcctacaatgctgacacgatatattgta 2804

                                                                        
Query: 78   accgacagaatactccaaaaccacagtacattgttacaaattgtgtaggaactgaaaaga 137
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2803 accgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaaga 2744

                                                    
Query: 138  aataataacattggaggagacacaaaaacatcccatttga 177
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2743 aataataacattggaggagacacaaaaacatcccatttga 2704



 Score =  192 bits (97), Expect = 5e-46
 Identities = 126/133 (94%), Gaps = 2/133 (1%)
 Strand = Plus / Minus

                                                                        
Query: 197  gccttgttcattcccaggctccaacaagagttaggccgccgtcgcc-gagagaccaaaat 255
            ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |
Sbjct: 2693 gccttgttcattcccaggctccagcaagagttaggccgccgtcgccagagagaccaaa-t 2635

                                                                        
Query: 256  ccatggcttcttcctttcctccaaacaataatcaacactcatgtaacctcgcaaaaatat 315
            |||||||||||| || ||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 2634 ccatggcttctttctgtcctcgaaacaataatcaacactcatgtgacctcgcaaaaatat 2575

                         
Query: 316  acagctcaaaact 328
            |||||||||||||
Sbjct: 2574 acagctcaaaact 2562
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>gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor isozyme 4F p82 subunit mRNA,
            complete cds
          Length = 2887

 Score =  295 bits (149), Expect = 5e-77
 Identities = 152/153 (99%)
 Strand = Plus / Minus

                                                                        
Query: 23   aaaataatcttagattcagttttcgactcctacaatgctgacacgatatattgtaaccga 82
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2862 aaaataatcttagattcagttttcgactcctacaatgctgacacgatatattgtaaccga 2803

                                                                        
Query: 83   cagaatactccaaaaccacagtacattgttacaaattgtgtaggaactgaaaagaaataa 142
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2802 cagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaagaaataa 2743

                                             
Query: 143  taacattggaggagacacaaaaacatcccattt 175
            |||||||||||||||||||||||||||||||||
Sbjct: 2742 taacattggaggagacacaaaaacatcccattt 2710



 Score =  230 bits (116), Expect = 2e-57
 Identities = 128/132 (96%)
 Strand = Plus / Minus

                                                                        
Query: 197  gccttgttcattcccaggctccaacaagagttaggccgccgtcgccgagagaccaaaatc 256
            ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 2696 gccttgttcattcccaggctccagcgagagttaggccgccgtcgccgagagaccaaaatc 2637

                                                                        
Query: 257  catggcttcttcctttcctccaaacaataatcaacactcatgtaacctcgcaaaaatata 316
            |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 2636 catggcttcttcctttcctcgaaacaataatcaacactcatgtgacctcgcaaaaatata 2577

                        
Query: 317  cagctcaaaact 328
            ||||||||||||
Sbjct: 2576 cagctcaaaact 2565
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>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
             complete sequence
          Length = 173171

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                         
Query: 61    tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 119
             |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 42105 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 42164

                                       
Query: 120   gtgtaggaactgaaaagaaataataa 145
             ||||| | || |||||||| ||||||
Sbjct: 42165 gtgtacgcacagaaaagaactaataa 42190



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 72/86 (83%), Gaps = 7/86 (8%)
 Strand = Plus / Plus

                                                                         
Query: 250   caaaatccatggcttcttcctttcctcc-------aaacaataatcaacactcatgtaac 302
             |||||||||||||||||| ||||||| |       |||||||||| ||||||||| | ||
Sbjct: 42261 caaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgac 42320

                                       
Query: 303   ctcgcaaaaatatacagctcaaaact 328
             || ||||||||||||||| |||||||
Sbjct: 42321 cttgcaaaaatatacagcacaaaact 42346
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                            
Query: 61       tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 119
                |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 24921520 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 24921579

                                          
Query: 120      gtgtaggaactgaaaagaaataataa 145
                ||||| | || |||||||| ||||||
Sbjct: 24921580 gtgtacgcacagaaaagaactaataa 24921605



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 72/86 (83%), Gaps = 7/86 (8%)
 Strand = Plus / Plus

                                                                            
Query: 250      caaaatccatggcttcttcctttcctcc-------aaacaataatcaacactcatgtaac 302
                |||||||||||||||||| ||||||| |       |||||||||| ||||||||| | ||
Sbjct: 24921676 caaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgac 24921735

                                          
Query: 303      ctcgcaaaaatatacagctcaaaact 328
                || ||||||||||||||| |||||||
Sbjct: 24921736 cttgcaaaaatatacagcacaaaact 24921761
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>dbj|AK065553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027N14, full
            insert sequence
          Length = 2907

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                        
Query: 61   tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 119
            |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 2795 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 2736

                                      
Query: 120  gtgtaggaactgaaaagaaataataa 145
            ||||| | || |||||||| ||||||
Sbjct: 2735 gtgtacgcacagaaaagaactaataa 2710



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 72/86 (83%), Gaps = 7/86 (8%)
 Strand = Plus / Minus

                                                                        
Query: 250  caaaatccatggcttcttcctttcctcc-------aaacaataatcaacactcatgtaac 302
            |||||||||||||||||| ||||||| |       |||||||||| ||||||||| | ||
Sbjct: 2639 caaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgac 2580

                                      
Query: 303  ctcgcaaaaatatacagctcaaaact 328
            || ||||||||||||||| |||||||
Sbjct: 2579 cttgcaaaaatatacagcacaaaact 2554
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>dbj|AK060761.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-A02, full
            insert sequence
          Length = 1712

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                        
Query: 61   tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 119
            |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 1701 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 1642

                                      
Query: 120  gtgtaggaactgaaaagaaataataa 145
            ||||| | || |||||||| ||||||
Sbjct: 1641 gtgtacgcacagaaaagaactaataa 1616



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 72/86 (83%), Gaps = 7/86 (8%)
 Strand = Plus / Minus

                                                                        
Query: 250  caaaatccatggcttcttcctttcctcc-------aaacaataatcaacactcatgtaac 302
            |||||||||||||||||| ||||||| |       |||||||||| ||||||||| | ||
Sbjct: 1545 caaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgac 1486

                                      
Query: 303  ctcgcaaaaatatacagctcaaaact 328
            || ||||||||||||||| |||||||
Sbjct: 1485 cttgcaaaaatatacagcacaaaact 1460
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>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
             sequence
          Length = 148644

 Score = 99.6 bits (50), Expect = 5e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                         
Query: 61    tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 119
             |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 49634 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 49693

                                       
Query: 120   gtgtaggaactgaaaagaaataataa 145
             ||||| | || |||||||| ||||||
Sbjct: 49694 gtgtacgcacagaaaagaactaataa 49719



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 72/86 (83%), Gaps = 7/86 (8%)
 Strand = Plus / Plus

                                                                         
Query: 250   caaaatccatggcttcttcctttcctcc-------aaacaataatcaacactcatgtaac 302
             |||||||||||||||||| ||||||| |       |||||||||| ||||||||| | ||
Sbjct: 49790 caaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgac 49849

                                       
Query: 303   ctcgcaaaaatatacagctcaaaact 328
             || ||||||||||||||| |||||||
Sbjct: 49850 cttgcaaaaatatacagcacaaaact 49875
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>emb|AM156958.1| Oryza sativa (indica cultivar-group) mRNA for putative eukaryotic
            translation initiation factor 4 gamma (eif(iso)4g gene),
            cultivar Gigante
          Length = 2599

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 46/51 (90%)
 Strand = Plus / Minus

                                                               
Query: 278  aaacaataatcaacactcatgtaacctcgcaaaaatatacagctcaaaact 328
            |||||||||| ||||||||| | |||| ||||||||||||||| |||||||
Sbjct: 2572 aaacaataatgaacactcatctgaccttgcaaaaatatacagcacaaaact 2522
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>emb|AM156957.1| Oryza sativa (indica cultivar-group) mRNA for putative eukaryotic
            translation initiation factor 4 gamma (eif(iso)4g gene),
            cultivar IR64
          Length = 2599

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 71/85 (83%), Gaps = 7/85 (8%)
 Strand = Plus / Minus

                                                                        
Query: 251  aaaatccatggcttcttcctttcc-------tccaaacaataatcaacactcatgtaacc 303
            ||||||||||||||||| ||||||       || |||||||||| ||||||||| | |||
Sbjct: 2599 aaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgacc 2540

                                     
Query: 304  tcgcaaaaatatacagctcaaaact 328
            | ||||||||||||||| |||||||
Sbjct: 2539 ttgcaaaaatatacagcacaaaact 2515
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>emb|AM156959.1| Oryza glaberrima mRNA for putative eukaryotic translation initiation
            factor 4 gamma (eif(iso)4g gene), cultivar Tog5681
          Length = 2699

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 278  aaacaataatcaacactcatgtaacctcgcaaaaatatacagctcaaaact 328
            |||||||||  ||||||||| | |||| ||||||||||||||| |||||||
Sbjct: 2666 aaacaataacgaacactcatctgaccttgcaaaaatatacagcacaaaact 2616
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>gb|AC151915.8| Medicago truncatula clone mth2-30n12, complete sequence
          Length = 92346

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 160   caaaaacatcccatttgacagaagaag 186
             |||||||||||||||||| ||||||||
Sbjct: 45816 caaaaacatcccatttgagagaagaag 45842
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>gb|AC151743.27| Medicago truncatula clone mth2-25e15, complete sequence
          Length = 105045

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 160   caaaaacatcccatttgacagaagaag 186
             |||||||||||||||||| ||||||||
Sbjct: 28363 caaaaacatcccatttgagagaagaag 28337
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>emb|CR847826.13| Zebrafish DNA sequence from clone CH211-204D2 in linkage group 8,
             complete sequence
          Length = 150519

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 24    aaataatcttagattcagtttt 45
             ||||||||||||||||||||||
Sbjct: 27178 aaataatcttagattcagtttt 27199
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>ref|XM_949171.1| Theileria annulata strain Ankara ribosomal protein S12 (TA20525)
           partial mRNA
          Length = 867

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 119 tgtgtaggaactgaaaagaaa 139
           |||||||||||||||||||||
Sbjct: 134 tgtgtaggaactgaaaagaaa 114
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>emb|BX927394.14| Zebrafish DNA sequence from clone CH211-262I10 in linkage group 21,
              complete sequence
          Length = 164899

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 52     ctacaatgctgacacgatatattgt 76
              |||||||||||| ||||||||||||
Sbjct: 122731 ctacaatgctgaaacgatatattgt 122707
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>emb|Z69724.1|HSU85B5 Human DNA sequence from clone LL0XNC01-85B5 on chromosome X, complete
            sequence
          Length = 39550

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 129  ctgaaaagaaataataacatt 149
            |||||||||||||||||||||
Sbjct: 3224 ctgaaaagaaataataacatt 3204
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>gb|BT016928.1| Zea mays clone E04912703C02.c mRNA sequence
          Length = 249

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 251 aaaatccatggcttcttcctttcc 274
           ||||||||||||||||| ||||||
Sbjct: 74  aaaatccatggcttctttctttcc 97
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>gb|AC140845.2| Mus musculus BAC clone RP24-386C13 from chromosome 8, complete sequence
          Length = 153426

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   gaaaagaaataataacattg 150
             ||||||||||||||||||||
Sbjct: 39323 gaaaagaaataataacattg 39342
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>gb|AC123554.3| Mus musculus BAC clone RP23-135A9 from chromosome 13, complete sequence
          Length = 205869

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   ccatggcttcttcctttcct 275
             ||||||||||||||||||||
Sbjct: 31484 ccatggcttcttcctttcct 31503
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>gb|AC128952.4| Rattus norvegicus 14 BAC CH230-510F9 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 170859

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   tgaaaagaaataataacatt 149
             ||||||||||||||||||||
Sbjct: 30825 tgaaaagaaataataacatt 30844
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>emb|AL354692.23| Human DNA sequence from clone RP11-361M4 on chromosome 9 Contains a
             novel pseudogene, complete sequence
          Length = 110443

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 307   caaaaatatacagctcaaaa 326
             ||||||||||||||||||||
Sbjct: 35208 caaaaatatacagctcaaaa 35189
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>gb|AC099101.7| Rattus norvegicus 14 BAC CH230-186B23 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 211584

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   tgaaaagaaataataacatt 149
             ||||||||||||||||||||
Sbjct: 41625 tgaaaagaaataataacatt 41606
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>emb|CR855858.5| Zebrafish DNA sequence from clone CH211-113H5 in linkage group 24,
             complete sequence
          Length = 152666

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    atgctgacacgatatattgt 76
             ||||||||||||||||||||
Sbjct: 54458 atgctgacacgatatattgt 54439
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>emb|BX901883.5| Zebrafish DNA sequence from clone DKEY-151M15 in linkage group 3,
              complete sequence
          Length = 241961

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     atgctgacacgatatattgt 76
              ||||||||||||||||||||
Sbjct: 198757 atgctgacacgatatattgt 198776
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>emb|BX927134.11| Zebrafish DNA sequence from clone CH211-261C20 in linkage group 20,
             complete sequence
          Length = 86384

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   tgaaaagaaataataacatt 149
             ||||||||||||||||||||
Sbjct: 84744 tgaaaagaaataataacatt 84763
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>gb|AC008158.16| Homo sapiens chromosome 17, clone RP11-42F20, complete sequence
          Length = 148110

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   ttgttcattcccaggctcca 219
             ||||||||||||||||||||
Sbjct: 70836 ttgttcattcccaggctcca 70817
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>gb|AC084472.1|AC084472 Caenorhabditis briggsae cosmid CB048M21, complete sequence
          Length = 62355

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    aagccaaaataatcttagat 37
             ||||||||||||||||||||
Sbjct: 14713 aagccaaaataatcttagat 14732
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>emb|AL773512.6| Mouse DNA sequence from clone RP23-454N6 on chromosome 2, complete
             sequence
          Length = 159731

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   gaaaagaaataataacattg 150
             ||||||||||||||||||||
Sbjct: 65829 gaaaagaaataataacattg 65810
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>emb|AL935194.4| Zebrafish DNA sequence from clone CH211-237E12, complete sequence
          Length = 145569

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    atgctgacacgatatattgt 76
             ||||||||||||||||||||
Sbjct: 50947 atgctgacacgatatattgt 50928
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>emb|BX248390.7| Zebrafish DNA sequence from clone DKEY-34F16 in linkage group 20,
             complete sequence
          Length = 239874

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    atgctgacacgatatattgt 76
             ||||||||||||||||||||
Sbjct: 46843 atgctgacacgatatattgt 46824
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>emb|CR751546.4| Zebrafish DNA sequence from clone CH211-53M6 in linkage group 20,
           complete sequence
          Length = 9831

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 130 tgaaaagaaataataacatt 149
           ||||||||||||||||||||
Sbjct: 360 tgaaaagaaataataacatt 379
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>emb|BX640497.11| Zebrafish DNA sequence from clone CH211-108O9 in linkage group 20,
             complete sequence
          Length = 189717

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    atgctgacacgatatattgt 76
             ||||||||||||||||||||
Sbjct: 78894 atgctgacacgatatattgt 78875
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>emb|BX470128.8| Zebrafish DNA sequence from clone DKEY-19F21 in linkage group 20,
             complete sequence
          Length = 209360

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    atgctgacacgatatattgt 76
             ||||||||||||||||||||
Sbjct: 38990 atgctgacacgatatattgt 38971
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>gb|AY110434.1| Zea mays CL533_2 mRNA sequence
          Length = 843

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 251 aaaatccatggcttcttcctttcc 274
           ||||||||||||||||| ||||||
Sbjct: 672 aaaatccatggcttctttctttcc 649
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>gb|AY109824.1| Zea mays CL533_1 mRNA sequence
          Length = 2894

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 303  ctcgcaaaaatatacagctcaaaa 326
            ||||||||| ||||||||||||||
Sbjct: 2656 ctcgcaaaattatacagctcaaaa 2633
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>emb|AL161752.4|CNS01RHH Human chromosome 14 DNA sequence BAC R-99L13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 178433

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 143   taacattggaggagacacaaaaac 166
             ||||||||||||||||||| ||||
Sbjct: 93093 taacattggaggagacacataaac 93116
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>emb|AL954703.8| Zebrafish DNA sequence from clone CH211-51I10 in linkage group 1,
              complete sequence
          Length = 184073

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     atgctgacacgatatattgt 76
              ||||||||||||||||||||
Sbjct: 135077 atgctgacacgatatattgt 135096
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>gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, complete sequence
          Length = 179585

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 131  gaaaagaaataataacattg 150
            ||||||||||||||||||||
Sbjct: 7379 gaaaagaaataataacattg 7360


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,890,134
Number of Sequences: 3902068
Number of extensions: 3890134
Number of successful extensions: 86316
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86204
Number of HSP's gapped (non-prelim): 106
length of query: 328
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 306
effective length of database: 17,147,199,772
effective search space: 5247043130232
effective search space used: 5247043130232
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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