ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl09f06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CET1_DEBHA (Q6BND2) mRNA capping enzyme beta subunit (EC 3.1.3.3... 28 4.6

>CET1_DEBHA (Q6BND2) mRNA capping enzyme beta subunit (EC 3.1.3.33)|
           (Polynucleotide 5'-triphosphatase) (mRNA
           5'-triphosphatase) (TPase)
          Length = 476

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 60  NLLNIPCPSPHHITNSTYQAWKKQAHYNYR 149
           NLLN P P+    T  T + W +  H N+R
Sbjct: 40  NLLNDPAPNNELKTKETKKDWSEDEHSNFR 69


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,378,306
Number of Sequences: 219361
Number of extensions: 663755
Number of successful extensions: 1505
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1505
length of database: 80,573,946
effective HSP length: 73
effective length of database: 64,560,593
effective search space used: 1549454232
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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