Clone Name | rbastl09f06 |
---|---|
Clone Library Name | barley_pub |
>emb|CR759819.7| Zebrafish DNA sequence from clone CH211-178L23, complete sequence Length = 118312 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Plus Query: 87 ccacatcacataactaacagcacgta 112 |||||||||||||||||||| ||||| Sbjct: 93720 ccacatcacataactaacagtacgta 93745
>emb|CR354606.12| Zebrafish DNA sequence from clone CH211-252L23 in linkage group 18, complete sequence Length = 138838 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Plus Query: 87 ccacatcacataactaacagcacgta 112 |||||||||||||||||||| ||||| Sbjct: 108314 ccacatcacataactaacagtacgta 108339
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 0.97 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 tttacacatactcctccctaatcta 37 |||||| |||||||||||||||||| Sbjct: 14230055 tttacatatactcctccctaatcta 14230079
>dbj|AP004992.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0022O02 Length = 176625 Score = 42.1 bits (21), Expect = 0.97 Identities = 24/25 (96%) Strand = Plus / Plus Query: 13 tttacacatactcctccctaatcta 37 |||||| |||||||||||||||||| Sbjct: 73519 tttacatatactcctccctaatcta 73543
>dbj|AK121496.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033001G17, full insert sequence Length = 2971 Score = 42.1 bits (21), Expect = 0.97 Identities = 24/25 (96%) Strand = Plus / Minus Query: 13 tttacacatactcctccctaatcta 37 |||||| |||||||||||||||||| Sbjct: 2919 tttacatatactcctccctaatcta 2895
>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16 Length = 349315 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 agaagccgatcccggtggcg 273 |||||||||||||||||||| Sbjct: 338808 agaagccgatcccggtggcg 338789
>gb|AC118557.2| Homo sapiens chromosome 1 clone RP11-499N7, complete sequence Length = 168688 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 aaaaacaagctcactacaat 143 |||||||||||||||||||| Sbjct: 126103 aaaaacaagctcactacaat 126122
>emb|BX511205.2|RN120J22 Rattus norvegicus chromosome 1 BAC RP32-120J22, complete sequence Length = 160764 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 acgtaccaagcatggaaaaa 127 |||||||||||||||||||| Sbjct: 108680 acgtaccaagcatggaaaaa 108699
>emb|AL672054.5| Mouse DNA sequence from clone RP23-237I22 on chromosome X, complete sequence Length = 187770 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 aagcatggaaaaaacaagct 134 |||||||||||||||||||| Sbjct: 66693 aagcatggaaaaaacaagct 66712 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,210,551 Number of Sequences: 3902068 Number of extensions: 2210551 Number of successful extensions: 37017 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 36991 Number of HSP's gapped (non-prelim): 26 length of query: 294 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 272 effective length of database: 17,147,199,772 effective search space: 4664038337984 effective search space used: 4664038337984 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)