Clone Name | rbastl09e07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | YUES_CAEEL (P90859) Hypothetical RING finger protein F26E4.11 in... | 30 | 2.1 | 2 | TA2R7_PAPHA (Q646F6) Taste receptor type 2 member 7 (T2R7) | 28 | 6.1 | 3 | BRLA_EMENI (P10069) Regulatory protein brlA (Bristle A protein) | 28 | 7.9 |
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>YUES_CAEEL (P90859) Hypothetical RING finger protein F26E4.11 in chromosome I| Length = 564 Score = 29.6 bits (65), Expect = 2.1 Identities = 14/27 (51%), Positives = 19/27 (70%) Frame = +3 Query: 36 ISFGTLFLFYLHIVLTCNLCRFQKRLT 116 ISF +LFLF++ I +T + RFQ LT Sbjct: 186 ISFLSLFLFFVSIAMTFLISRFQHHLT 212
>TA2R7_PAPHA (Q646F6) Taste receptor type 2 member 7 (T2R7)| Length = 317 Score = 28.1 bits (61), Expect = 6.1 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Frame = +3 Query: 9 TSVLISTCTISFGTLFL-FYLHI---VLTCNLCRFQKRLTHVT*RNPAQNVLFLWIAYHM 176 T + S C +SF L L + HI L+ CR HV + LFL+IAY++ Sbjct: 190 TLLPFSVCLVSFFLLILSLWRHIRRMQLSATGCRDPSTEAHVRALKAVISFLFLFIAYYL 249 Query: 177 YHVVA 191 ++A Sbjct: 250 SFLIA 254
>BRLA_EMENI (P10069) Regulatory protein brlA (Bristle A protein)| Length = 432 Score = 27.7 bits (60), Expect = 7.9 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -2 Query: 176 HVVSNPKKKNVLCWVPSCY 120 H+ S+ K+K +CWVP C+ Sbjct: 340 HMKSHSKEKPHVCWVPGCH 358 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,128,328 Number of Sequences: 219361 Number of extensions: 742242 Number of successful extensions: 1791 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1771 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1791 length of database: 80,573,946 effective HSP length: 67 effective length of database: 65,876,759 effective search space used: 1581042216 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)