ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl09e06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC137610.2| Oryza sativa (japonica cultivar-group) chromosome... 208 8e-51
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 208 8e-51
3gb|AC154227.2| Mus musculus BAC clone RP24-142A23 from chromosom... 42 1.1
4gb|AC113961.14| Mus musculus chromosome 19, clone RP23-18G1, com... 42 1.1
5gb|AC116479.14| Mus musculus, clone RP23-397F3, complete sequence 42 1.1
6gb|AC136037.2| Rattus norvegicus X BAC CH230-378N18 (Children's ... 42 1.1
7gb|AC157914.4| Mus musculus chromosome 19, clone RP24-284E14, co... 42 1.1
8emb|CT025618.6| Mouse DNA sequence from clone RP24-268L19 on chr... 42 1.1
9gb|AC131297.11| Mus musculus chromosome 8, clone RP23-284E15, co... 40 4.4
10ref|NM_001001789.1| Homo sapiens chromosome 21 open reading fram... 40 4.4
11gb|AF121898.3| Homo sapiens chromosome 8 clone XX-55B12 map q21.... 40 4.4
12gb|AC144633.3| Mus musculus BAC clone RP23-26J4 from chromosome ... 40 4.4
13gb|AY204748.1| Homo sapiens chromosome 21 open reading frame 24 ... 40 4.4
14gb|AC140185.3| Mus musculus BAC clone RP24-363A3 from chromosome... 40 4.4
15emb|CR847563.12| Zebrafish DNA sequence from clone CH211-202H14 ... 40 4.4
16emb|CR974441.3| Mouse DNA sequence from clone RP23-271P7 on chro... 40 4.4
17gb|AC004485.2| Homo sapiens BAC clone CTB-118E13 from 7, complet... 40 4.4
18gb|AC142353.1| Pan troglodytes BAC clone RP43-21M1 from 7, compl... 40 4.4
19gb|AC116794.11| Mus musculus chromosome 5, clone RP24-312A3, com... 40 4.4
20emb|Z75741.1|HS107N3 Human DNA sequence from clone RP1-107N3 on ... 40 4.4
21emb|BX324174.5| Mouse DNA sequence from clone RP23-110D11 on chr... 40 4.4
22emb|AL389925.10| Human DNA sequence from clone RP11-131O15 on ch... 40 4.4
23emb|AL022148.1|HS435A7 Human DNA sequence from clone RP3-435A7 o... 40 4.4
24gb|AC129929.5| Homo sapiens chromosome 11, clone RP5-1075F20, co... 40 4.4
25emb|CR938728.5| Mouse DNA sequence from clone RP23-352D3 on chro... 40 4.4
26emb|CR938726.3| Mouse DNA sequence from clone RP23-28J9 on chrom... 40 4.4
27emb|BX908776.14| Zebrafish DNA sequence from clone DKEY-88E12 in... 40 4.4
28emb|CR556704.4| Mouse DNA sequence from clone RP23-324J18 on chr... 40 4.4
29emb|CR555303.7| Mouse DNA sequence from clone RP24-322L1 on chro... 40 4.4
30emb|CR547128.7| Mouse DNA sequence from clone RP23-418H15 on chr... 40 4.4
31emb|BX294196.6| Mouse DNA sequence from clone RP23-247H18 on chr... 40 4.4
32emb|BX813306.4| Mouse DNA sequence from clone RP23-442E11 on chr... 40 4.4
33emb|CR589930.7| Mouse DNA sequence from clone RP23-224F19 on chr... 40 4.4
34emb|BX322592.7| Mouse DNA sequence from clone RP23-209C19 on chr... 40 4.4
35emb|CR556699.5| Mouse DNA sequence from clone RP23-127C3 on chro... 40 4.4
36emb|CR556711.3| Mouse DNA sequence from clone RP23-415J12 on chr... 40 4.4
37gb|AC153924.8| Mus musculus 10 BAC RP23-74P12 (Roswell Park Canc... 40 4.4
38gb|AC093887.3| Homo sapiens BAC clone RP11-667D12 from 4, comple... 40 4.4
39emb|BX855608.7| Mouse DNA sequence from clone RP23-79C10 on chro... 40 4.4
40emb|BX936283.12| Mouse DNA sequence from clone RP23-66M21 on chr... 40 4.4
41emb|AL671211.11| Mouse DNA sequence from clone RP23-29K3 on chro... 40 4.4
42emb|AL929496.10| Mouse DNA sequence from clone RP23-3D2 on chrom... 40 4.4
43emb|BX465214.7| Mouse DNA sequence from clone RP24-89M24 on chro... 40 4.4
44emb|BX813332.4| Mouse DNA sequence from clone RP23-191A10 on chr... 40 4.4
45dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
46emb|BX897717.4| Mouse DNA sequence from clone RP24-273F10 on chr... 40 4.4
47emb|BX901960.4| Mouse DNA sequence from clone RP24-116B15 on chr... 40 4.4
48dbj|AP001732.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 4.4
49dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
50dbj|AP003142.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
51gb|AC055711.18| Homo sapiens 3 BAC RP11-67E18 (Roswell Park Canc... 40 4.4
52gb|AC091012.8| Homo sapiens chromosome 11, clone RP11-113A6, com... 40 4.4
53emb|BX890588.3| Mouse DNA sequence from clone RP23-88C4 on chrom... 40 4.4
54emb|BX855616.3| Mouse DNA sequence from clone RP23-49L5 on chrom... 40 4.4
55emb|BX813315.3| Mouse DNA sequence from clone RP23-297P1 on chro... 40 4.4
56emb|BX465839.8| Mouse DNA sequence from clone RP24-70F15 on chro... 40 4.4
57gb|AC140440.3| Mus musculus BAC clone RP23-71A13 from chromosome... 40 4.4
58gb|AC133512.5| Mus musculus BAC clone RP23-205B19 from chromosom... 40 4.4
59gb|AC134250.4| Mus musculus BAC clone RP23-406L17 from chromosom... 40 4.4
60emb|BX571729.9| Mouse DNA sequence from clone RP23-187P8 on chro... 40 4.4
61emb|BX465222.9| Mouse DNA sequence from clone RP24-73A23 on chro... 40 4.4
62emb|BX842675.2| Mouse DNA sequence from clone RP24-406D18 on chr... 40 4.4
63emb|BX813312.2| Mouse DNA sequence from clone RP23-430K7 on chro... 40 4.4
64emb|BX842587.2| Mouse DNA sequence from clone RP23-30A1 on chrom... 40 4.4
65dbj|BS000161.1| Pan troglodytes chromosome 22 clone:PTB-058P10, ... 40 4.4
66emb|AL954220.1| Pan troglodytes chromosome 22 clone PTB-091C04 m... 40 4.4
67emb|CR556706.7| Mouse DNA sequence from clone RP23-105E20 on chr... 40 4.4
68emb|BX324112.7| Mouse DNA sequence from clone RP23-18I13 on chro... 40 4.4
69emb|CT025608.12| Mouse DNA sequence from clone RP23-292F17 on ch... 40 4.4
70emb|CR936447.12| Mouse DNA sequence from clone RP23-301E3 on chr... 40 4.4
71gb|AC002536.1|AC002536 Human Chromosome 11 pac pDJ1075f20, compl... 40 4.4
72emb|AL672071.9| Mouse DNA sequence from clone RP23-367O24 on chr... 40 4.4
73dbj|AP001039.1| Homo sapiens genomic DNA, chromosome 21, clone:Q... 40 4.4
74emb|AL772243.4| Mouse DNA sequence from clone RP23-186J21 on chr... 40 4.4 
>gb|AC137610.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
             OSJNBa0018H09, complete sequence
          Length = 155329

 Score =  208 bits (105), Expect = 8e-51
 Identities = 171/193 (88%)
 Strand = Plus / Plus

                                                                         
Query: 141   agaagtccacggatatgcatctcattgtaaagcttggaaatctctttcatattaccacat 200
             |||||||||||||||||||||||||  |||||||| |||||||||| |||||||||| ||
Sbjct: 63801 agaagtccacggatatgcatctcatcataaagctttgaaatctcttccatattaccagat 63860

                                                                         
Query: 201   cgaacataaccttgaatcagtgtccaatatgtaacataatttggatccacattattctca 260
               ||  ||||| ||||||||||| || ||||||| |||||| ||||| ||||| ||||||
Sbjct: 63861 ttaatgtaaccatgaatcagtgtacagtatgtaatataattcggatctacattgttctca 63920

                                                                         
Query: 261   atcatttgatccagaagcttgattgcttcttccatatacccttgagtacagagaccatgg 320
             |||||||| ||||| | ||||||||||||||||||||||||||||||||| | ||||| |
Sbjct: 63921 atcatttggtccagtaacttgattgcttcttccatatacccttgagtacacaaaccatag 63980

                          
Query: 321   atcagtatagaat 333
             |||||||||||||
Sbjct: 63981 atcagtatagaat 63993
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  208 bits (105), Expect = 8e-51
 Identities = 171/193 (88%)
 Strand = Plus / Plus

                                                                            
Query: 141      agaagtccacggatatgcatctcattgtaaagcttggaaatctctttcatattaccacat 200
                |||||||||||||||||||||||||  |||||||| |||||||||| |||||||||| ||
Sbjct: 11161547 agaagtccacggatatgcatctcatcataaagctttgaaatctcttccatattaccagat 11161606

                                                                            
Query: 201      cgaacataaccttgaatcagtgtccaatatgtaacataatttggatccacattattctca 260
                  ||  ||||| ||||||||||| || ||||||| |||||| ||||| ||||| ||||||
Sbjct: 11161607 ttaatgtaaccatgaatcagtgtacagtatgtaatataattcggatctacattgttctca 11161666

                                                                            
Query: 261      atcatttgatccagaagcttgattgcttcttccatatacccttgagtacagagaccatgg 320
                |||||||| ||||| | ||||||||||||||||||||||||||||||||| | ||||| |
Sbjct: 11161667 atcatttggtccagtaacttgattgcttcttccatatacccttgagtacacaaaccatag 11161726

                             
Query: 321      atcagtatagaat 333
                |||||||||||||
Sbjct: 11161727 atcagtatagaat 11161739
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>gb|AC154227.2| Mus musculus BAC clone RP24-142A23 from chromosome 14, complete
             sequence
          Length = 156644

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 9     aacatcttccaagtaatgaaa 29
             |||||||||||||||||||||
Sbjct: 55518 aacatcttccaagtaatgaaa 55498
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>gb|AC113961.14| Mus musculus chromosome 19, clone RP23-18G1, complete sequence
          Length = 256791

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 212   ttgaatcagtgtccaatatgt 232
             |||||||||||||||||||||
Sbjct: 42891 ttgaatcagtgtccaatatgt 42911
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>gb|AC116479.14| Mus musculus, clone RP23-397F3, complete sequence
          Length = 225423

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 212   ttgaatcagtgtccaatatgt 232
             |||||||||||||||||||||
Sbjct: 46216 ttgaatcagtgtccaatatgt 46196
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>gb|AC136037.2| Rattus norvegicus X BAC CH230-378N18 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 98442

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 217   tcagtgtccaatatgtaacataatt 241
             |||||||| ||||||||||||||||
Sbjct: 27508 tcagtgtctaatatgtaacataatt 27532
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>gb|AC157914.4| Mus musculus chromosome 19, clone RP24-284E14, complete sequence
          Length = 166967

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 212   ttgaatcagtgtccaatatgt 232
             |||||||||||||||||||||
Sbjct: 26662 ttgaatcagtgtccaatatgt 26642
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>emb|CT025618.6| Mouse DNA sequence from clone RP24-268L19 on chromosome 14, complete
             sequence
          Length = 139312

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 9     aacatcttccaagtaatgaaa 29
             |||||||||||||||||||||
Sbjct: 27171 aacatcttccaagtaatgaaa 27191
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>gb|AC131297.11| Mus musculus chromosome 8, clone RP23-284E15, complete sequence
          Length = 188817

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 30     agtatatacacacaaacaaa 49
              ||||||||||||||||||||
Sbjct: 134936 agtatatacacacaaacaaa 134955
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>ref|NM_001001789.1| Homo sapiens chromosome 21 open reading frame 24 (C21orf24), mRNA
          Length = 3621

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 91   ttacaaccggatctgcatgt 110
            ||||||||||||||||||||
Sbjct: 3098 ttacaaccggatctgcatgt 3079
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>gb|AF121898.3| Homo sapiens chromosome 8 clone XX-55B12 map q21.3, complete sequence
          Length = 146811

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 65    atatttacattctggctgtttaca 88
             |||||||| |||||||||||||||
Sbjct: 80785 atatttactttctggctgtttaca 80762
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>gb|AC144633.3| Mus musculus BAC clone RP23-26J4 from chromosome 7, complete sequence
          Length = 223362

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    tatatacacacaaacaaaag 51
             ||||||||||||||||||||
Sbjct: 64353 tatatacacacaaacaaaag 64372
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>gb|AY204748.1| Homo sapiens chromosome 21 open reading frame 24 isoform 6 (C21orf24)
            mRNA, complete cds
          Length = 3621

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 91   ttacaaccggatctgcatgt 110
            ||||||||||||||||||||
Sbjct: 3098 ttacaaccggatctgcatgt 3079
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>gb|AC140185.3| Mus musculus BAC clone RP24-363A3 from chromosome 5, complete sequence
          Length = 169091

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    aaagtatatacacacaaaca 47
             ||||||||||||||||||||
Sbjct: 35709 aaagtatatacacacaaaca 35690
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>emb|CR847563.12| Zebrafish DNA sequence from clone CH211-202H14 in linkage group 11,
             complete sequence
          Length = 204337

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 174   ttggaaatctctttcatatt 193
             ||||||||||||||||||||
Sbjct: 32195 ttggaaatctctttcatatt 32214
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>emb|CR974441.3| Mouse DNA sequence from clone RP23-271P7 on chromosome X, complete
              sequence
          Length = 199381

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     atatacacacaaacaaaagg 52
              ||||||||||||||||||||
Sbjct: 136274 atatacacacaaacaaaagg 136293
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>gb|AC004485.2| Homo sapiens BAC clone CTB-118E13 from 7, complete sequence
          Length = 185516

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   aagtccacggatatgcatct 162
             ||||||||||||||||||||
Sbjct: 72835 aagtccacggatatgcatct 72816
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>gb|AC142353.1| Pan troglodytes BAC clone RP43-21M1 from 7, complete sequence
          Length = 182634

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    gaagtccacggatatgcatc 161
              ||||||||||||||||||||
Sbjct: 166047 gaagtccacggatatgcatc 166066
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>gb|AC116794.11| Mus musculus chromosome 5, clone RP24-312A3, complete sequence
          Length = 154612

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     aaagtatatacacacaaaca 47
              ||||||||||||||||||||
Sbjct: 103519 aaagtatatacacacaaaca 103500
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>emb|Z75741.1|HS107N3 Human DNA sequence from clone RP1-107N3 on chromosome X Contains a
            kinesin heavy chain member 2 (KIF2) pseudogene and a
            Huntingtin interacting protein K (HYPK) pseudogene,
            complete sequence
          Length = 174045

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  tgaatcagtgtccaatatgt 232
            ||||||||||||||||||||
Sbjct: 3875 tgaatcagtgtccaatatgt 3894
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>emb|BX324174.5| Mouse DNA sequence from clone RP23-110D11 on chromosome X, complete
             sequence
          Length = 215075

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 85313 atatacacacaaacaaaagg 85332
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>emb|AL389925.10| Human DNA sequence from clone RP11-131O15 on chromosome 1 Contains the
             3' end of the gene for interleukin-23 receptor (IL23R), a
             DnaJ (Hsp40) homolog subfamily B member 6 (DNAJB6)
             pseudogene and the 5' end of the gene for interleukin 12
             receptor, beta 2 (IL12RB2), complete sequence
          Length = 122289

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 213   tgaatcagtgtccaatatgt 232
             ||||||||||||||||||||
Sbjct: 45247 tgaatcagtgtccaatatgt 45266
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>emb|AL022148.1|HS435A7 Human DNA sequence from clone RP3-435A7 on chromosome Xq22.1-22.3,
            complete sequence
          Length = 98067

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 213  tgaatcagtgtccaatatgt 232
            ||||||||||||||||||||
Sbjct: 4752 tgaatcagtgtccaatatgt 4733
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>gb|AC129929.5| Homo sapiens chromosome 11, clone RP5-1075F20, complete sequence
          Length = 141449

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   tgaatcagtgtccaatatgt 232
             ||||||||||||||||||||
Sbjct: 26831 tgaatcagtgtccaatatgt 26812
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>emb|CR938728.5| Mouse DNA sequence from clone RP23-352D3 on chromosome X, complete
             sequence
          Length = 193559

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 40817 atatacacacaaacaaaagg 40798
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>emb|CR938726.3| Mouse DNA sequence from clone RP23-28J9 on chromosome X, complete
              sequence
          Length = 239405

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     atatacacacaaacaaaagg 52
              ||||||||||||||||||||
Sbjct: 164215 atatacacacaaacaaaagg 164196
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>emb|BX908776.14| Zebrafish DNA sequence from clone DKEY-88E12 in linkage group 3,
             complete sequence
          Length = 249946

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 27    aaaagtatatacacacaaacaaaa 50
             ||||| ||||||||||||||||||
Sbjct: 73117 aaaagcatatacacacaaacaaaa 73094
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>emb|CR556704.4| Mouse DNA sequence from clone RP23-324J18 on chromosome X, complete
             sequence
          Length = 199507

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 88449 atatacacacaaacaaaagg 88430



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 10862 atatacacacaaacaaaagg 10843
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>emb|CR555303.7| Mouse DNA sequence from clone RP24-322L1 on chromosome X, complete
             sequence
          Length = 135280

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 86577 atatacacacaaacaaaagg 86596
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>emb|CR547128.7| Mouse DNA sequence from clone RP23-418H15 on chromosome X, complete
            sequence
          Length = 38706

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 33   atatacacacaaacaaaagg 52
            ||||||||||||||||||||
Sbjct: 2486 atatacacacaaacaaaagg 2505
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>emb|BX294196.6| Mouse DNA sequence from clone RP23-247H18 on chromosome X, complete
             sequence
          Length = 57938

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 39573 atatacacacaaacaaaagg 39554
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>emb|BX813306.4| Mouse DNA sequence from clone RP23-442E11 on chromosome X, complete
             sequence
          Length = 93435

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 81094 atatacacacaaacaaaagg 81075
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>emb|CR589930.7| Mouse DNA sequence from clone RP23-224F19 on chromosome X, complete
             sequence
          Length = 79313

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 19834 atatacacacaaacaaaagg 19815
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>emb|BX322592.7| Mouse DNA sequence from clone RP23-209C19 on chromosome X, complete
             sequence
          Length = 72444

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 25570 atatacacacaaacaaaagg 25551
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>emb|CR556699.5| Mouse DNA sequence from clone RP23-127C3 on chromosome X, complete
             sequence
          Length = 109237

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 29291 atatacacacaaacaaaagg 29310
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>emb|CR556711.3| Mouse DNA sequence from clone RP23-415J12 on chromosome X, complete
             sequence
          Length = 195389

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 37682 atatacacacaaacaaaagg 37663
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>gb|AC153924.8| Mus musculus 10 BAC RP23-74P12 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 214001

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    tatatacacacaaacaaaag 51
             ||||||||||||||||||||
Sbjct: 44303 tatatacacacaaacaaaag 44322
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>gb|AC093887.3| Homo sapiens BAC clone RP11-667D12 from 4, complete sequence
          Length = 192886

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    agtaaaattggcttcaggca 141
              ||||||||||||||||||||
Sbjct: 141766 agtaaaattggcttcaggca 141785
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>emb|BX855608.7| Mouse DNA sequence from clone RP23-79C10 on chromosome X, complete
              sequence
          Length = 186950

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     atatacacacaaacaaaagg 52
              ||||||||||||||||||||
Sbjct: 180419 atatacacacaaacaaaagg 180438
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>emb|BX936283.12| Mouse DNA sequence from clone RP23-66M21 on chromosome X, complete
             sequence
          Length = 195292

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 15402 atatacacacaaacaaaagg 15421
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>emb|AL671211.11| Mouse DNA sequence from clone RP23-29K3 on chromosome X, complete
             sequence
          Length = 147573

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 36928 atatacacacaaacaaaagg 36909
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>emb|AL929496.10| Mouse DNA sequence from clone RP23-3D2 on chromosome X, complete sequence
          Length = 254072

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     atatacacacaaacaaaagg 52
              ||||||||||||||||||||
Sbjct: 167407 atatacacacaaacaaaagg 167388



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     atatacacacaaacaaaagg 52
              ||||||||||||||||||||
Sbjct: 112248 atatacacacaaacaaaagg 112229
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>emb|BX465214.7| Mouse DNA sequence from clone RP24-89M24 on chromosome X, complete
            sequence
          Length = 251075

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 33   atatacacacaaacaaaagg 52
            ||||||||||||||||||||
Sbjct: 3822 atatacacacaaacaaaagg 3803
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>emb|BX813332.4| Mouse DNA sequence from clone RP23-191A10 on chromosome X, complete
             sequence
          Length = 110514

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 92170 atatacacacaaacaaaagg 92151
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 73       attctggctgtttacaacttacaa 96
                |||||||||| |||||||||||||
Sbjct: 30529749 attctggctggttacaacttacaa 30529726
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>emb|BX897717.4| Mouse DNA sequence from clone RP24-273F10 on chromosome X, complete
             sequence
          Length = 74320

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 37000 atatacacacaaacaaaagg 37019
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>emb|BX901960.4| Mouse DNA sequence from clone RP24-116B15 on chromosome X, complete
              sequence
          Length = 185687

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     atatacacacaaacaaaagg 52
              ||||||||||||||||||||
Sbjct: 141700 atatacacacaaacaaaagg 141681
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>dbj|AP001732.1| Homo sapiens genomic DNA, chromosome 21q, section 76/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     ttacaaccggatctgcatgt 110
              ||||||||||||||||||||
Sbjct: 273104 ttacaaccggatctgcatgt 273123
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>dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0036G09
          Length = 124118

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 73    attctggctgtttacaacttacaa 96
             |||||||||| |||||||||||||
Sbjct: 12353 attctggctggttacaacttacaa 12330
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>dbj|AP003142.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0435H01
          Length = 160141

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 73     attctggctgtttacaacttacaa 96
              |||||||||| |||||||||||||
Sbjct: 158012 attctggctggttacaacttacaa 157989
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>gb|AC055711.18| Homo sapiens 3 BAC RP11-67E18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 154850

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    tcttccaagtaatgaaaagt 32
             ||||||||||||||||||||
Sbjct: 69940 tcttccaagtaatgaaaagt 69921
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>gb|AC091012.8| Homo sapiens chromosome 11, clone RP11-113A6, complete sequence
          Length = 145042

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 213   tgaatcagtgtccaatatgt 232
             ||||||||||||||||||||
Sbjct: 76059 tgaatcagtgtccaatatgt 76078
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>emb|BX890588.3| Mouse DNA sequence from clone RP23-88C4 on chromosome X, complete
              sequence
          Length = 239548

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     atatacacacaaacaaaagg 52
              ||||||||||||||||||||
Sbjct: 185659 atatacacacaaacaaaagg 185640
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>emb|BX855616.3| Mouse DNA sequence from clone RP23-49L5 on chromosome X, complete
              sequence
          Length = 235650

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     atatacacacaaacaaaagg 52
              ||||||||||||||||||||
Sbjct: 233165 atatacacacaaacaaaagg 233146
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>emb|BX813315.3| Mouse DNA sequence from clone RP23-297P1 on chromosome X, complete
             sequence
          Length = 79746

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 13417 atatacacacaaacaaaagg 13436
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>emb|BX465839.8| Mouse DNA sequence from clone RP24-70F15 on chromosome X, complete
             sequence
          Length = 75393

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 37321 atatacacacaaacaaaagg 37302
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>gb|AC140440.3| Mus musculus BAC clone RP23-71A13 from chromosome unknown, complete
              sequence
          Length = 199043

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     atatacacacaaacaaaagg 52
              ||||||||||||||||||||
Sbjct: 127679 atatacacacaaacaaaagg 127698



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 50096 atatacacacaaacaaaagg 50115
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>gb|AC133512.5| Mus musculus BAC clone RP23-205B19 from chromosome unknown, complete
              sequence
          Length = 187276

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     atatacacacaaacaaaagg 52
              ||||||||||||||||||||
Sbjct: 170955 atatacacacaaacaaaagg 170936



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 92258 atatacacacaaacaaaagg 92239
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>gb|AC134250.4| Mus musculus BAC clone RP23-406L17 from chromosome unknown, complete
              sequence
          Length = 168403

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     atatacacacaaacaaaagg 52
              ||||||||||||||||||||
Sbjct: 138753 atatacacacaaacaaaagg 138734



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 64870 atatacacacaaacaaaagg 64851
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>emb|BX571729.9| Mouse DNA sequence from clone RP23-187P8 on chromosome X, complete
              sequence
          Length = 241971

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     atatacacacaaacaaaagg 52
              ||||||||||||||||||||
Sbjct: 226605 atatacacacaaacaaaagg 226586



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 46330 atatacacacaaacaaaagg 46311
to top
>emb|BX465222.9| Mouse DNA sequence from clone RP24-73A23 on chromosome X, complete
             sequence
          Length = 207803

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 68703 atatacacacaaacaaaagg 68684
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>emb|BX842675.2| Mouse DNA sequence from clone RP24-406D18 on chromosome X, complete
             sequence
          Length = 183602

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 75283 atatacacacaaacaaaagg 75264
to top
>emb|BX813312.2| Mouse DNA sequence from clone RP23-430K7 on chromosome X, complete
            sequence
          Length = 48245

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 33   atatacacacaaacaaaagg 52
            ||||||||||||||||||||
Sbjct: 4480 atatacacacaaacaaaagg 4499
to top
>emb|BX842587.2| Mouse DNA sequence from clone RP23-30A1 on chromosome X, complete
             sequence
          Length = 45051

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 36928 atatacacacaaacaaaagg 36909
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>dbj|BS000161.1| Pan troglodytes chromosome 22 clone:PTB-058P10, map 22, complete
            sequences
          Length = 78415

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 91   ttacaaccggatctgcatgt 110
            ||||||||||||||||||||
Sbjct: 9060 ttacaaccggatctgcatgt 9079
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>emb|AL954220.1| Pan troglodytes chromosome 22 clone PTB-091C04 map q21.2, complete
              sequence
          Length = 241304

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     ttacaaccggatctgcatgt 110
              ||||||||||||||||||||
Sbjct: 216069 ttacaaccggatctgcatgt 216088
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>emb|CR556706.7| Mouse DNA sequence from clone RP23-105E20 on chromosome X, complete
             sequence
          Length = 201020

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 93722 atatacacacaaacaaaagg 93703



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 19839 atatacacacaaacaaaagg 19820
to top
>emb|BX324112.7| Mouse DNA sequence from clone RP23-18I13 on chromosome X, complete
             sequence
          Length = 80698

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 62383 atatacacacaaacaaaagg 62364
to top
>emb|CT025608.12| Mouse DNA sequence from clone RP23-292F17 on chromosome 9, complete
             sequence
          Length = 200204

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   ttgaatcagtgtccaatatg 231
             ||||||||||||||||||||
Sbjct: 71299 ttgaatcagtgtccaatatg 71318
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>emb|CR936447.12| Mouse DNA sequence from clone RP23-301E3 on chromosome X, complete
             sequence
          Length = 57069

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    atatacacacaaacaaaagg 52
             ||||||||||||||||||||
Sbjct: 12848 atatacacacaaacaaaagg 12829
to top
>gb|AC002536.1|AC002536 Human Chromosome 11 pac pDJ1075f20, complete sequence
          Length = 140977

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    tgaatcagtgtccaatatgt 232
              ||||||||||||||||||||
Sbjct: 114143 tgaatcagtgtccaatatgt 114162
to top
>emb|AL672071.9| Mouse DNA sequence from clone RP23-367O24 on chromosome X, complete
              sequence
          Length = 199416

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     atatacacacaaacaaaagg 52
              ||||||||||||||||||||
Sbjct: 165176 atatacacacaaacaaaagg 165157
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>dbj|AP001039.1| Homo sapiens genomic DNA, chromosome 21, clone:Q78A2, ERG-ETS2 region,
             complete sequence
          Length = 39910

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    ttacaaccggatctgcatgt 110
             ||||||||||||||||||||
Sbjct: 10051 ttacaaccggatctgcatgt 10070
to top
>emb|AL772243.4| Mouse DNA sequence from clone RP23-186J21 on chromosome X, complete
             sequence
          Length = 134797

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   gaacataaccttgaatcagt 221
             ||||||||||||||||||||
Sbjct: 31079 gaacataaccttgaatcagt 31098


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,857,109
Number of Sequences: 3902068
Number of extensions: 3857109
Number of successful extensions: 84541
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84326
Number of HSP's gapped (non-prelim): 215
length of query: 333
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 311
effective length of database: 17,147,199,772
effective search space: 5332779129092
effective search space used: 5332779129092
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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