>FADB_SHEON (Q8EKR9) Fatty oxidation complex alpha subunit [Includes: Enoyl-CoA|
           hydratase (EC 4.2.1.17);
           Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC
           5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35);
           3-hydroxybutyryl-CoA epimerase (EC 5.1.2.
          Length = 716

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = +1

Query: 133 KPQLFC-MHLPNVVKEKPLLEEAKTSRNTAETL-HVLLISSQRMKTAI 270
           KP+ FC MH  N V + PL+E  +   ++ ET+  V+  +S+  KT I
Sbjct: 442 KPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAYASKMGKTPI 489

>YAD7_YEAST (P39728) Hypothetical 30.5 kDa protein in PYK1-SNC1 intergenic|
           region
          Length = 267

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = +2

Query: 215 LQKLSM-FYSYPHNV*KQPFLLSP*QAKSTIAQPIMDIKSPQIDTSYAWEGSSLSVSICS 391
           LQKL    Y  P  +  QP LL     K  I   +   K     T Y    +S+ V++CS
Sbjct: 16  LQKLDTNVYFGPCEILTQPILLQYENIKFIIGVNLSTEKIASFYTQYFRNSNSVVVNLCS 75

Query: 392 PTCSS*APSLA 424
           PT ++ A   A
Sbjct: 76  PTTAAVATKKA 86

>MIPO1_HUMAN (Q8TD10) Mirror-image polydactyly gene 1 protein|
          Length = 442

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +2

Query: 47  ESLWATVDKNYNVMDHRH*KNTLETMGPQNLSCSACICQTSSKKNR 184
           ES++ T +K YNVM+HRH     E M P         CQ +S  ++
Sbjct: 74  ESVYCTTEK-YNVMEHRHNDMHYECMTP---------CQVTSDSDK 109

>SCN7A_HUMAN (Q01118) Sodium channel protein type 7 alpha subunit (Sodium|
           channel protein type VII alpha subunit) (Putative
           voltage-gated sodium channel alpha subunit Nax) (Sodium
           channel protein, cardiac and skeletal muscle
           alpha-subunit)
          Length = 1682

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = +3

Query: 162 KRRQRKTAIGGGKDV*KHCRNSPCSTHILTTYENSHSFYRPSRPK 296
           K  Q K+  GG K+  K   +S CST  +   E    FY   R K
Sbjct: 851 KEIQSKSGDGGSKEKIKQSSSSECSTVDIAISEEEEMFYGGERSK 895

>CCPR_YARLI (Q6C0Z6) Cytochrome c peroxidase, mitochondrial precursor (EC|
           1.11.1.5) (CCP)
          Length = 340

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = -1

Query: 161 GRCMQNN*GFGDPW--SPVYFFND 96
           GRC + N GF  PW  SP  F ND
Sbjct: 227 GRCHKQNSGFEGPWTFSPTMFTND 250

>GBB_SCHPO (Q10282) Guanine nucleotide-binding protein beta subunit|
          Length = 305

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = -2

Query: 157 DACRTTEVLGTHGLQCIFLMTMVHNVVIFIYGGP*RFRNFWSLRKQYLC 11
           +  +   VL  H +  + L  +  N  +F+ GG  +    W LR  Y C
Sbjct: 135 EQAKAISVLKGHEMDIVSLDFLPSNPNLFVTGGCDKLAKLWDLRAAYCC 183

>FADB_VIBF1 (Q5E8X6) Fatty oxidation complex alpha subunit [Includes: Enoyl-CoA|
           hydratase (EC 4.2.1.17);
           Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC
           5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35);
           3-hydroxybutyryl-CoA epimerase (EC 5.1.2.
          Length = 725

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +1

Query: 133 KPQLFC-MHLPNVVKEKPLLEEAKTSRNTAETL-HVLLISSQRMKTAI 270
           +P+ FC MH  N V   PL+E  +  + + +T+  V+  +SQ  KT I
Sbjct: 442 RPENFCGMHFFNPVHRMPLVEVIRGEKTSQQTIDRVVAYASQMGKTPI 489


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,585,654
Number of Sequences: 219361
Number of extensions: 1323933
Number of successful extensions: 3125
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3124
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)