ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl09c09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y1356_MYCBO (P64806) Hypothetical protein Mb1356 29 3.3
2Y1322_MYCTU (P64805) Hypothetical protein Rv1322/MT1363.1 29 3.3
3NADB2_RALSO (Q8XQG4) L-aspartate oxidase 2 (EC 1.4.3.16) (LASPO ... 28 7.3

>Y1356_MYCBO (P64806) Hypothetical protein Mb1356|
          Length = 98

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 63  EIPAASVDERRQWHAQSW 10
           ++P A VD+RR WH   W
Sbjct: 68  DLPQAGVDDRRHWHTPCW 85



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>Y1322_MYCTU (P64805) Hypothetical protein Rv1322/MT1363.1|
          Length = 98

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 63  EIPAASVDERRQWHAQSW 10
           ++P A VD+RR WH   W
Sbjct: 68  DLPQAGVDDRRHWHTPCW 85



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>NADB2_RALSO (Q8XQG4) L-aspartate oxidase 2 (EC 1.4.3.16) (LASPO 2) (Quinolinate|
           synthetase B 2)
          Length = 536

 Score = 28.1 bits (61), Expect = 7.3
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +2

Query: 29  CLLSSTDAAGISSRLELALPRR 94
           C  S TD AG +SRL L LP R
Sbjct: 396 CAQSVTDTAGSASRLRLTLPER 417


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,941,107
Number of Sequences: 219361
Number of extensions: 123463
Number of successful extensions: 479
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 479
length of database: 80,573,946
effective HSP length: 7
effective length of database: 79,038,419
effective search space used: 1896922056
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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