ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl09c08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PURA_DROME (Q9Y0Y2) Adenylosuccinate synthetase (EC 6.3.4.4) (IM... 33 0.23
2SUVH7_ARATH (Q9C5P1) Histone-lysine N-methyltransferase, H3 lysi... 30 1.5
3CG146_HUMAN (Q9BSY9) UPF0326 protein CGI-146 30 1.5
4AKL1_YEAST (P38080) Serine/threonine-protein kinase AKL1 (EC 2.7... 30 1.9
5EF2_SULAC (P23112) Elongation factor 2 (EF-2) 29 2.5
6SIAH2_XENLA (Q9I8X5) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven ... 29 3.3
7SIAH2_RAT (Q8R4T2) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in... 29 3.3
8SIAH2_MOUSE (Q06986) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven ... 29 3.3
9SIAH2_HUMAN (O43255) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven ... 29 3.3
10CG146_PONPY (Q5R456) UPF0326 protein CGI-146 homolog 28 4.3
11UBP22_MOUSE (Q5DU02) Ubiquitin carboxyl-terminal hydrolase 22 (E... 28 5.6
12UBP22_HUMAN (Q9UPT9) Ubiquitin carboxyl-terminal hydrolase 22 (E... 28 7.3
13PURA_SCHPO (Q02787) Adenylosuccinate synthetase (EC 6.3.4.4) (IM... 27 9.6
14SYV_BUCBP (Q89AG3) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--t... 27 9.6
15AMOL2_HUMAN (Q9Y2J4) Angiomotin-like protein 2 (Leman coiled-coi... 27 9.6
16UROK_HUMAN (P00749) Urokinase-type plasminogen activator precurs... 27 9.6
17SACB_STRMU (P11701) Levansucrase precursor (EC 2.4.1.10) (Beta-D... 27 9.6
18CG146_MOUSE (Q9D291) UPF0326 protein CGI-146 homolog 27 9.6

>PURA_DROME (Q9Y0Y2) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate|
           ligase) (AdSS) (AMPSase)
          Length = 447

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -1

Query: 260 IEDRVEPCIVIHKHVQGIQEAEKGKQEIKKRCKGL 156
           I DR       H+HV G+QEAEKG + +    KG+
Sbjct: 123 ISDRAHLVFDFHQHVDGMQEAEKGGKSLGTTKKGI 157



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>SUVH7_ARATH (Q9C5P1) Histone-lysine N-methyltransferase, H3 lysine-9 specific|
           SUVH7 (EC 2.1.1.43) (Histone H3-K9 methyltransferase 7)
           (H3-K9-HMTase 7) (Suppressor of variegation 3-9 homolog
           protein 7) (Su(var)3-9 homolog protein 7) (Protein SET
           DOMAIN GR
          Length = 693

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 4/23 (17%)
 Frame = +1

Query: 16  GCSNC----ILHRNCNCVTRNYD 72
           GC NC     +H+NC CV RN D
Sbjct: 457 GCQNCRHQPCMHQNCTCVQRNGD 479



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>CG146_HUMAN (Q9BSY9) UPF0326 protein CGI-146|
          Length = 194

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +1

Query: 172 FLISCLPFSASCIPCTCLWMTMHGSTRSSISHSQKCLLVQQNDFATSLSV 321
           +  SC+PF  SC+P    W+T   + +SS+S   +  L +  D A S SV
Sbjct: 133 YFSSCIPFLQSCLPKE--WLT-PAALQSSVSQELQDELEEAEDAAASASV 179



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>AKL1_YEAST (P38080) Serine/threonine-protein kinase AKL1 (EC 2.7.11.1)|
          Length = 1108

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
 Frame = +3

Query: 246 NSVLNLSFSEMPLS---TAK*LCNFSLSSSSPTVQ 341
           N VLNLS +EM LS   T   + +FS SSSS ++Q
Sbjct: 840 NGVLNLSLNEMDLSRDDTGAAVSSFSSSSSSASIQ 874



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>EF2_SULAC (P23112) Elongation factor 2 (EF-2)|
          Length = 736

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = -1

Query: 260 IEDRVEPCIVIHKHVQGIQEAEKGKQEIKKRCKGLVV 150
           +E+RV P + I+K  + I+E +   QEI+KR   L++
Sbjct: 135 LEERVRPILFINKVDRLIKELKLSSQEIQKRLIDLII 171



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>SIAH2_XENLA (Q9I8X5) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia|
           homolog 2) (Xsiah-2)
          Length = 313

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 14/62 (22%), Positives = 24/62 (38%)
 Frame = +1

Query: 151 TTKPLQRFLISCLPFSASCIPCTCLWMTMHGSTRSSISHSQKCLLVQQNDFATSLSVHLR 330
           T KP    +    P+S  C   +C W     +    ++HS K +   Q +    L+  + 
Sbjct: 141 TEKPEHEDICEYRPYSCPCPGASCKWQGSLENVMQHLTHSHKSITTLQGEDIVFLATDIN 200

Query: 331 PP 336
            P
Sbjct: 201 LP 202



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>SIAH2_RAT (Q8R4T2) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia|
           homolog 2) (Siah-2)
          Length = 325

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 15/66 (22%), Positives = 25/66 (37%)
 Frame = +1

Query: 139 TERKTTKPLQRFLISCLPFSASCIPCTCLWMTMHGSTRSSISHSQKCLLVQQNDFATSLS 318
           T   T KP    +    P+S  C   +C W     +  S + H+ K +   Q +    L+
Sbjct: 149 TLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAHKSITTLQGEDIVFLA 208

Query: 319 VHLRPP 336
             +  P
Sbjct: 209 TDINLP 214



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>SIAH2_MOUSE (Q06986) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia|
           homolog 2) (Siah-2) (mSiah2)
          Length = 325

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 15/66 (22%), Positives = 25/66 (37%)
 Frame = +1

Query: 139 TERKTTKPLQRFLISCLPFSASCIPCTCLWMTMHGSTRSSISHSQKCLLVQQNDFATSLS 318
           T   T KP    +    P+S  C   +C W     +  S + H+ K +   Q +    L+
Sbjct: 149 TLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAHKSITTLQGEDIVFLA 208

Query: 319 VHLRPP 336
             +  P
Sbjct: 209 TDINLP 214



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>SIAH2_HUMAN (O43255) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia|
           homolog 2) (Siah-2) (hSiah2)
          Length = 324

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 15/66 (22%), Positives = 25/66 (37%)
 Frame = +1

Query: 139 TERKTTKPLQRFLISCLPFSASCIPCTCLWMTMHGSTRSSISHSQKCLLVQQNDFATSLS 318
           T   T KP    +    P+S  C   +C W     +  S + H+ K +   Q +    L+
Sbjct: 148 TLHHTEKPEHEDICEYRPYSCPCPGASCKWQGSLEAVMSHLMHAHKSITTLQGEDIVFLA 207

Query: 319 VHLRPP 336
             +  P
Sbjct: 208 TDINLP 213



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>CG146_PONPY (Q5R456) UPF0326 protein CGI-146 homolog|
          Length = 194

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +1

Query: 172 FLISCLPFSASCIPCTCLWMTMHGSTRSSISHSQKCLLVQQNDFATSLS 318
           +  SC+PF  SC+P    W+T   + +SS+S   +  L +  D A S S
Sbjct: 133 YFSSCIPFLQSCLPKE--WLT-PAALQSSVSQELQDELEEAEDAAASAS 178



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>UBP22_MOUSE (Q5DU02) Ubiquitin carboxyl-terminal hydrolase 22 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 22)
           (Ubiquitin-specific-processing protease 22)
           (Deubiquitinating enzyme 22)
          Length = 525

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = -2

Query: 163 RA*LSCVLWIFTTRAVEGVPQFCCSTTVSIYRSFL*HSCSFCARYNCY 20
           RA   C +W  T  A +   + C      I+ + L HSC +C  + C+
Sbjct: 39  RAIYQCFVWSGTAEARKRKAKSCVCHVCGIHLNRL-HSCLYCVFFGCF 85



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>UBP22_HUMAN (Q9UPT9) Ubiquitin carboxyl-terminal hydrolase 22 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 22)
           (Ubiquitin-specific-processing protease 22)
           (Deubiquitinating enzyme 22)
          Length = 525

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -2

Query: 163 RA*LSCVLWIFTTRAVEGVPQFCCSTTVSIYRSFL*HSCSFCARYNCY 20
           RA   C +W  T  A +   + C      ++ + L HSC +C  + C+
Sbjct: 39  RAIYQCFVWSGTAEARKRKAKSCICHVCGVHLNRL-HSCLYCVFFGCF 85



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>PURA_SCHPO (Q02787) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate|
           ligase) (AdSS) (AMPSase)
          Length = 434

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 18/54 (33%), Positives = 22/54 (40%)
 Frame = -1

Query: 317 EREVAKSFCCTKRHF*E*EIEDRVEPCIVIHKHVQGIQEAEKGKQEIKKRCKGL 156
           E+   K   C  R F    I DR       H+    + EAE GKQ I    KG+
Sbjct: 97  EKLEQKGLKCRDRIF----ISDRAHLVFDYHQRADALNEAELGKQSIGTTGKGI 146



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>SYV_BUCBP (Q89AG3) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 956

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 24  QLYLAQKLQLCHKKL 68
           Q+Y+  K QLCHKKL
Sbjct: 937 QIYIEHKTQLCHKKL 951



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>AMOL2_HUMAN (Q9Y2J4) Angiomotin-like protein 2 (Leman coiled-coil protein)|
           (LCCP)
          Length = 779

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -2

Query: 328 EDELREKLQSHFAVLRGISENERLRTEL 245
           + + +EKL+   A+LRG  E++R R EL
Sbjct: 430 QQQEQEKLEREMALLRGAIEDQRRRAEL 457



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>UROK_HUMAN (P00749) Urokinase-type plasminogen activator precursor (EC|
           3.4.21.73) (uPA) (U-plasminogen activator) [Contains:
           Urokinase-type plasminogen activator long chain A;
           Urokinase-type plasminogen activator short chain A;
           Urokinase-type plasminogen
          Length = 431

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +1

Query: 10  HQGCSNCILHRNCNCVTRNYDKSIQWC 90
           HQ  SNC       CV+  Y  +I WC
Sbjct: 25  HQVPSNCDCLNGGTCVSNKYFSNIHWC 51



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>SACB_STRMU (P11701) Levansucrase precursor (EC 2.4.1.10)|
           (Beta-D-fructofuranosyl transferase) (Sucrose
           6-fructosyl transferase)
          Length = 795

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 5   KIIKDVAIVSCTETATVSQETTINRYSGATTELGDT 112
           K+I D A V    + T  Q  T+ + S +T E+G T
Sbjct: 94  KVITDNAAVESKASKTKDQAATVTKTSASTPEVGQT 129



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>CG146_MOUSE (Q9D291) UPF0326 protein CGI-146 homolog|
          Length = 194

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +1

Query: 172 FLISCLPFSASCIPCTCLWMTMHGSTRSSISHSQKCLLVQQNDFATS 312
           +  SC+PF  SC+P    W+T   + +SS+S   +  L +  D A S
Sbjct: 133 YFSSCIPFLQSCLPKE--WLT-PAALQSSVSQELQDELEEAEDAAAS 176


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,358,286
Number of Sequences: 219361
Number of extensions: 804169
Number of successful extensions: 2404
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2403
length of database: 80,573,946
effective HSP length: 90
effective length of database: 60,831,456
effective search space used: 1459954944
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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