>ref|XM_473854.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1314

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 234  gcaggagcgtgctgccgagcgcggcgcggagg 265
            ||||||||||||| ||||||||||||||||||
Sbjct: 1297 gcaggagcgtgctcccgagcgcggcgcggagg 1266

>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17,
             complete sequence
          Length = 160484

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                             
Query: 234   gcaggagcgtgctgccgagcgcggcgcggagg 265
             ||||||||||||| ||||||||||||||||||
Sbjct: 15144 gcaggagcgtgctcccgagcgcggcgcggagg 15113

>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10,
              complete sequence
          Length = 150551

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                              
Query: 234    gcaggagcgtgctgccgagcgcggcgcggagg 265
              ||||||||||||| ||||||||||||||||||
Sbjct: 130437 gcaggagcgtgctcccgagcgcggcgcggagg 130406

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                                
Query: 234      gcaggagcgtgctgccgagcgcggcgcggagg 265
                ||||||||||||| ||||||||||||||||||
Sbjct: 31033064 gcaggagcgtgctcccgagcgcggcgcggagg 31033033

>gb|AE006033.1| Caulobacter crescentus CB15 section 359 of 359 of the complete
           genome
          Length = 8050

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 249 cgagcgcggcgcggagggcctc 270
           ||||||||||||||||||||||
Sbjct: 328 cgagcgcggcgcggagggcctc 349

>gb|U87804.2|CCU87804 Caulobacter crescentus 50 kDa protein (ogt) gene, partial cds; and
           GidA (gidA), GidB (gidB), ParA (parA), and ParB (parB)
           genes, complete cds
          Length = 5787

 Score = 44.1 bits (22), Expect = 0.25
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 249 cgagcgcggcgcggagggcctc 270
           ||||||||||||||||||||||
Sbjct: 751 cgagcgcggcgcggagggcctc 730

>ref|XM_594248.2| PREDICTED: Bos taurus similar to CG2446-PC, isoform C (LOC516108),
           mRNA
          Length = 866

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 225 gagccgggtgcaggagcgtgc 245
           |||||||||||||||||||||
Sbjct: 547 gagccgggtgcaggagcgtgc 567

>emb|AL138928.7| Human DNA sequence from clone RP11-197C12 on chromosome 1, complete
             sequence
          Length = 76294

 Score = 42.1 bits (21), Expect = 0.97
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 49    cataagttattggagcaacttattt 73
             ||||| |||||||||||||||||||
Sbjct: 10563 cataaattattggagcaacttattt 10539

>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 40      tacatttttcataagttatt 59
               ||||||||||||||||||||
Sbjct: 2711988 tacatttttcataagttatt 2712007

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 248     ccgagcgcggcgcggagggc 267
               ||||||||||||||||||||
Sbjct: 2527750 ccgagcgcggcgcggagggc 2527769

>ref|XM_752403.1| Ustilago maydis 521 hypothetical protein (UM01349.1) partial mRNA
          Length = 2571

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 226  agccgggtgcaggagcgtgc 245
            ||||||||||||||||||||
Sbjct: 1634 agccgggtgcaggagcgtgc 1615

>emb|CR352236.17| Zebrafish DNA sequence from clone DKEYP-123E12 in linkage group 23,
             complete sequence
          Length = 178472

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    ggtacagtacatttttcata 52
             ||||||||||||||||||||
Sbjct: 19431 ggtacagtacatttttcata 19450

>gb|AC132427.4| Mus musculus BAC clone RP23-326N11 from chromosome 18, complete sequence
          Length = 192806

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 99     cacacagccaatcacaccacaccc 122
              ||||||||||| ||||||||||||
Sbjct: 145724 cacacagccaaccacaccacaccc 145747

>gb|AC113544.9| Mus musculus chromosome 10, clone RP23-227F5, complete sequence
          Length = 177145

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     tcatgtattcttgcaatccc 31
              ||||||||||||||||||||
Sbjct: 148868 tcatgtattcttgcaatccc 148887

>gb|AC142284.1| Pan troglodytes BAC clone RP43-163P11 from 7, complete sequence
          Length = 171686

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 206    acccaactgaagtttcaggg 225
              ||||||||||||||||||||
Sbjct: 101988 acccaactgaagtttcaggg 101969

>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 40      tacatttttcataagttatt 59
               ||||||||||||||||||||
Sbjct: 2734428 tacatttttcataagttatt 2734447

>gb|AC166066.6| Mus musculus 10 BAC RP24-285H2 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 173920

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    tcatgtattcttgcaatccc 31
             ||||||||||||||||||||
Sbjct: 19815 tcatgtattcttgcaatccc 19834

>gb|AC008083.23| Homo sapiens 12 BAC RP11-493L12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 192046

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 44     tttttcataagttattggag 63
              ||||||||||||||||||||
Sbjct: 117100 tttttcataagttattggag 117119

>gb|DQ354110.1| Streptomyces violaceusniger strain DSM 4137 polyether nigericin
            biosynthetic gene cluster, complete sequence
          Length = 95700

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 246  tgccgagcgcggcgcggagggcctccgc 273
            ||||||||||||||| ||||||| ||||
Sbjct: 2489 tgccgagcgcggcgccgagggccgccgc 2462

>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0067N01, from chromosome 3, complete sequence
          Length = 159636

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 248    ccgagcgcggcgcggagggc 267
              ||||||||||||||||||||
Sbjct: 142344 ccgagcgcggcgcggagggc 142325

>gb|AC004886.1| Homo sapiens PAC clone RP4-784G16 from 7, complete sequence
          Length = 143364

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 206    acccaactgaagtttcaggg 225
              ||||||||||||||||||||
Sbjct: 123483 acccaactgaagtttcaggg 123464

>gb|AC074052.6| Homo sapiens chromosome 16 clone RP11-483K5, complete sequence
          Length = 188458

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    tttttcataagttattggag 63
             ||||||||||||||||||||
Sbjct: 29143 tttttcataagttattggag 29124

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 248     ccgagcgcggcgcggagggc 267
               ||||||||||||||||||||
Sbjct: 2527860 ccgagcgcggcgcggagggc 2527879

>gb|AC097472.2| Homo sapiens BAC clone RP11-75M18 from 4, complete sequence
          Length = 146479

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    tttttcataagttattggag 63
             ||||||||||||||||||||
Sbjct: 68483 tttttcataagttattggag 68502

>gb|AC119796.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1172F09,
              complete sequence
          Length = 106057

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 248    ccgagcgcggcgcggagggc 267
              ||||||||||||||||||||
Sbjct: 100246 ccgagcgcggcgcggagggc 100265

>gb|AE005110.1| Halobacterium sp. NRC-1 section 141 of 170 of the complete genome
          Length = 11525

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 247  gccgagcgcggcgcggaggg 266
            ||||||||||||||||||||
Sbjct: 7120 gccgagcgcggcgcggaggg 7139

>gb|AC018769.2|AC018769 Homo sapiens chromosome 16 clone RP11-568A19, complete sequence
          Length = 157613

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     tttttcataagttattggag 63
              ||||||||||||||||||||
Sbjct: 109405 tttttcataagttattggag 109386

>dbj|AK065520.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026K01, full
           insert sequence
          Length = 2401

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 248 ccgagcgcggcgcggagggc 267
           ||||||||||||||||||||
Sbjct: 269 ccgagcgcggcgcggagggc 250

>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 40      tacatttttcataagttatt 59
               ||||||||||||||||||||
Sbjct: 2751992 tacatttttcataagttatt 2752011

>gb|AC004242.1|AC004242 Homo sapiens 12q13 PAC RPCI1-316M24 (Roswell Park Cancer Institute
             Human PAC library) complete sequence
          Length = 104913

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    tttttcataagttattggag 63
             ||||||||||||||||||||
Sbjct: 36201 tttttcataagttattggag 36182


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,354,413
Number of Sequences: 3902068
Number of extensions: 2354413
Number of successful extensions: 44577
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44455
Number of HSP's gapped (non-prelim): 122
length of query: 293
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 271
effective length of database: 17,147,199,772
effective search space: 4646891138212
effective search space used: 4646891138212
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)