>gb|AC119875.7| Mus musculus chromosome 1, clone RP24-291C20, complete sequence
          Length = 162379

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 410   cagcactgcttcaatttgctt 430
             |||||||||||||||||||||
Sbjct: 64971 cagcactgcttcaatttgctt 64951

>gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 6
              through 10 and partial cds
          Length = 688489

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 150    gagatacacacatacacagag 170
              |||||||||||||||||||||
Sbjct: 626182 gagatacacacatacacagag 626202

>gb|AC006525.1| Homo sapiens chromosome 5 clone RP1-4O17, complete sequence
          Length = 90604

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 150   gagatacacacatacacagag 170
             |||||||||||||||||||||
Sbjct: 45780 gagatacacacatacacagag 45800

>gb|AC159306.2| Mus musculus BAC clone RP23-206B2 from chromosome 14, complete sequence
          Length = 194660

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 150    gagatacacacatacacagag 170
              |||||||||||||||||||||
Sbjct: 128984 gagatacacacatacacagag 129004

>gb|AC161574.8| Mus musculus chromosome 1, clone RP23-352D14, complete sequence
          Length = 187614

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 143    acagcctgagatacacacatacacagag 170
              |||| ||||||||| |||||||||||||
Sbjct: 169501 acagactgagatacgcacatacacagag 169528

>gb|AC123618.26| Mus musculus chromosome 12, clone RP23-38N23, complete sequence
          Length = 201596

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     gccaaacttttcaatgaaat 35
              ||||||||||||||||||||
Sbjct: 113211 gccaaacttttcaatgaaat 113192

>gb|AC079290.12| Mus musculus chromosome 18, clone RP23-330E13, complete sequence
          Length = 202255

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    agatacacacatacacagag 170
              ||||||||||||||||||||
Sbjct: 126383 agatacacacatacacagag 126364

>gb|AC120237.5| Rattus norvegicus 1 BAC CH230-453N3 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 150760

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    ggctcaaaaaatacaaacta 230
              ||||||||||||||||||||
Sbjct: 126642 ggctcaaaaaatacaaacta 126623

>gb|AC127415.3| Mus musculus BAC clone RP23-450L4 from chromosome 19, complete sequence
          Length = 177302

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   agatacacacatacacagag 170
             ||||||||||||||||||||
Sbjct: 33435 agatacacacatacacagag 33454

>gb|AC155230.2| Mus musculus BAC clone RP24-335J14 from chromosome 12, complete
            sequence
          Length = 135049

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 151  agatacacacatacacagag 170
            ||||||||||||||||||||
Sbjct: 5375 agatacacacatacacagag 5356

>emb|BX571802.15| Zebrafish DNA sequence from clone CH211-197A16 in linkage group 10,
             complete sequence
          Length = 196999

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   gagatacacacatacacaga 169
             ||||||||||||||||||||
Sbjct: 97659 gagatacacacatacacaga 97678



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   gagatacacacatacacaga 169
             ||||||||||||||||||||
Sbjct: 96835 gagatacacacatacacaga 96854

>gb|AC134331.2| Mus musculus BAC clone RP24-344O12 from chromosome 19, complete
            sequence
          Length = 155342

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 151  agatacacacatacacagag 170
            ||||||||||||||||||||
Sbjct: 6740 agatacacacatacacagag 6721

>gb|AC132452.3| Mus musculus BAC clone RP23-195K10 from chromosome 19, complete
             sequence
          Length = 218688

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   gagatacacacatacacaga 169
             ||||||||||||||||||||
Sbjct: 95129 gagatacacacatacacaga 95148

>gb|AC099668.2| Homo sapiens chromosome 3 clone RP11-901L6, complete sequence
          Length = 242222

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    ctcaaaaaatacaaactact 232
              ||||||||||||||||||||
Sbjct: 228367 ctcaaaaaatacaaactact 228386

>gb|AC121810.3| Mus musculus BAC clone RP23-453G13 from chromosome 1, complete sequence
          Length = 208102

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 270    gtgaaaacaagccacgcaac 289
              ||||||||||||||||||||
Sbjct: 111679 gtgaaaacaagccacgcaac 111660

>emb|CR392021.10| Zebrafish DNA sequence from clone CH211-126H20 in linkage group 5,
              complete sequence
          Length = 182008

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 126    tttaaaaccaagggactaca 145
              ||||||||||||||||||||
Sbjct: 137817 tttaaaaccaagggactaca 137836

>gb|BC065663.1| Danio rerio VAMP (vesicle-associated membrane protein)-associated
            protein A, mRNA (cDNA clone MGC:77382 IMAGE:6969291),
            complete cds
          Length = 1950

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 148  ctgagatacacacatacacagagc 171
            |||||||||||| |||||||||||
Sbjct: 1252 ctgagatacacaaatacacagagc 1275

>gb|AC104452.2| Homo sapiens chromosome 3 clone RP11-949J7, complete sequence
          Length = 186563

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 213   ctcaaaaaatacaaactact 232
             ||||||||||||||||||||
Sbjct: 59551 ctcaaaaaatacaaactact 59570

>ref|NM_199918.2| Danio rerio VAMP (vesicle-associated membrane protein)-associated
            protein A (vapa), mRNA
          Length = 1950

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 148  ctgagatacacacatacacagagc 171
            |||||||||||| |||||||||||
Sbjct: 1252 ctgagatacacaaatacacagagc 1275

>gb|AC090138.5| Homo sapiens, clone RP11-63C8, complete sequence
          Length = 189231

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     aaacttttcaatgaaataca 38
              ||||||||||||||||||||
Sbjct: 124019 aaacttttcaatgaaataca 124000

>gb|AC154351.2| Mus musculus BAC clone RP24-536C5 from chromosome 17, complete sequence
          Length = 188013

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   gagatacacacatacacaga 169
             ||||||||||||||||||||
Sbjct: 64610 gagatacacacatacacaga 64591

>gb|AC159880.2| Mus musculus BAC clone RP24-490L14 from chromosome 9, complete sequence
          Length = 142451

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    agatacacacatacacagag 170
              ||||||||||||||||||||
Sbjct: 120796 agatacacacatacacagag 120815

>gb|AC016845.14| Homo sapiens chromosome 11, clone RP11-5E23, complete sequence
          Length = 167727

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     aaacttttcaatgaaataca 38
              ||||||||||||||||||||
Sbjct: 126688 aaacttttcaatgaaataca 126707

>emb|AL935290.10| Zebrafish DNA sequence from clone CH211-270H11, complete sequence
          Length = 129665

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 150    gagatacacacatacacaga 169
              ||||||||||||||||||||
Sbjct: 115510 gagatacacacatacacaga 115491

>gb|AC107787.14| Mus musculus chromosome 1, clone RP23-432F10, complete sequence
          Length = 212943

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 143    acagcctgagatacacacatacacagag 170
              |||| ||||||||| |||||||||||||
Sbjct: 190384 acagactgagatacgcacatacacagag 190357

>gb|AC105165.11| Mus musculus chromosome 18, clone RP24-302C24, complete sequence
          Length = 186431

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    agatacacacatacacagag 170
              ||||||||||||||||||||
Sbjct: 152294 agatacacacatacacagag 152313

>emb|CR974423.21| Mouse DNA sequence from clone RP23-182F9 on chromosome 12, complete
             sequence
          Length = 238441

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    gccaaacttttcaatgaaat 35
             ||||||||||||||||||||
Sbjct: 65820 gccaaacttttcaatgaaat 65801

>emb|CT030001.16| Mouse DNA sequence from clone RP23-225D15 on chromosome 17, complete
              sequence
          Length = 180961

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 150    gagatacacacatacacaga 169
              ||||||||||||||||||||
Sbjct: 153801 gagatacacacatacacaga 153820

>emb|CT025619.9| Mouse DNA sequence from clone RP23-442M18 on chromosome 9, complete
              sequence
          Length = 193329

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    agatacacacatacacagag 170
              ||||||||||||||||||||
Sbjct: 145397 agatacacacatacacagag 145416

>gb|AC173483.1| Mus musculus BAC clone RP23-281C13 from chromosome 12, complete
             sequence
          Length = 182922

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   agatacacacatacacagag 170
             ||||||||||||||||||||
Sbjct: 19553 agatacacacatacacagag 19572


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,183,104
Number of Sequences: 3902068
Number of extensions: 5183104
Number of successful extensions: 124807
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124691
Number of HSP's gapped (non-prelim): 116
length of query: 434
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 412
effective length of database: 17,147,199,772
effective search space: 7064646306064
effective search space used: 7064646306064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)