Clone Name | rbastl09c02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AGLU_HORVU (Q43763) Alpha-glucosidase precursor (EC 3.2.1.20) (M... | 141 | 3e-34 | 2 | BAAT_HUMAN (Q14032) Bile acid CoA:amino acid N-acyltransferase (... | 32 | 0.36 | 3 | THR_DROME (P42286) Protein three rows | 28 | 6.8 | 4 | ATIN_HHV2H (P68336) Alpha trans-inducing protein (Vmw65) (ICP25)... | 27 | 8.9 | 5 | ATIN_HHV23 (P68335) Alpha trans-inducing protein (Vmw65) (ICP25)... | 27 | 8.9 |
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>AGLU_HORVU (Q43763) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)| Length = 877 Score = 141 bits (356), Expect = 3e-34 Identities = 78/108 (72%), Positives = 83/108 (76%), Gaps = 1/108 (0%) Frame = -1 Query: 401 GGRSDWSMVRFSCEMGSD-GAIKVKSEVVHNSYAQSRTLVISKVVLMGHRSPAAPKKLTV 225 G RSDWSMVRF+ ++ ++ GAIKVKSEVVHNSYAQSRTLVISKVVLMGHRSPAAPKKLTV Sbjct: 770 GRRSDWSMVRFNYKIPNNKGAIKVKSEVVHNSYAQSRTLVISKVVLMGHRSPAAPKKLTV 829 Query: 224 HVNXXXXXXXXXAGTRYQNXXXXXXXXXXXXLSLVVGEEFELKVAMSY 81 HVN AGTRYQN LSLVVGEEFELKVAMSY Sbjct: 830 HVNSAEVEASSSAGTRYQNAGGLGGVAHIGGLSLVVGEEFELKVAMSY 877
>BAAT_HUMAN (Q14032) Bile acid CoA:amino acid N-acyltransferase (EC 2.3.1.65)| (BAT) (BACAT) (Glycine N-choloyltransferase) (Long-chain fatty-acyl-CoA hydrolase) (EC 3.1.2.2) Length = 418 Score = 32.0 bits (71), Expect = 0.36 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = +3 Query: 294 PALCVRVVHHLRLHLDGPVAPHLAAEPY 377 P C H LRLH G V PH AA+ + Sbjct: 370 PLCCASTTHDLRLHWGGEVIPHAAAQEH 397
>THR_DROME (P42286) Protein three rows| Length = 1379 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = -1 Query: 392 SDWSMVRFSCEMGSDGAIKVKSEVVHNSYAQSRTLVISKVVLMGHRS 252 SD+ +V + +M D +I K VH+ Q R+L + +GH S Sbjct: 611 SDYHLVLLARQMRKDDSISKKCIEVHDKLRQQRSLSRMDNLCLGHAS 657
>ATIN_HHV2H (P68336) Alpha trans-inducing protein (Vmw65) (ICP25) (VP16| protein) (Alpha-TIF) Length = 490 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = +3 Query: 306 VRVVHHLRLHLDGPVAPHLAAEPYHAPIASP 398 +R ++H+R HL+ P+ AAE AP+ +P Sbjct: 290 LRELNHIREHLNLPLVRSAAAEEPGAPLTTP 320
>ATIN_HHV23 (P68335) Alpha trans-inducing protein (Vmw65) (ICP25) (VP16| protein) (Alpha-TIF) Length = 490 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = +3 Query: 306 VRVVHHLRLHLDGPVAPHLAAEPYHAPIASP 398 +R ++H+R HL+ P+ AAE AP+ +P Sbjct: 290 LRELNHIREHLNLPLVRSAAAEEPGAPLTTP 320 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,668,298 Number of Sequences: 219361 Number of extensions: 645069 Number of successful extensions: 1970 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1922 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1969 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 1359926328 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)