ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl09c02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AGLU_HORVU (Q43763) Alpha-glucosidase precursor (EC 3.2.1.20) (M... 141 3e-34
2BAAT_HUMAN (Q14032) Bile acid CoA:amino acid N-acyltransferase (... 32 0.36
3THR_DROME (P42286) Protein three rows 28 6.8
4ATIN_HHV2H (P68336) Alpha trans-inducing protein (Vmw65) (ICP25)... 27 8.9
5ATIN_HHV23 (P68335) Alpha trans-inducing protein (Vmw65) (ICP25)... 27 8.9

>AGLU_HORVU (Q43763) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)|
          Length = 877

 Score =  141 bits (356), Expect = 3e-34
 Identities = 78/108 (72%), Positives = 83/108 (76%), Gaps = 1/108 (0%)
 Frame = -1

Query: 401  GGRSDWSMVRFSCEMGSD-GAIKVKSEVVHNSYAQSRTLVISKVVLMGHRSPAAPKKLTV 225
            G RSDWSMVRF+ ++ ++ GAIKVKSEVVHNSYAQSRTLVISKVVLMGHRSPAAPKKLTV
Sbjct: 770  GRRSDWSMVRFNYKIPNNKGAIKVKSEVVHNSYAQSRTLVISKVVLMGHRSPAAPKKLTV 829

Query: 224  HVNXXXXXXXXXAGTRYQNXXXXXXXXXXXXLSLVVGEEFELKVAMSY 81
            HVN         AGTRYQN            LSLVVGEEFELKVAMSY
Sbjct: 830  HVNSAEVEASSSAGTRYQNAGGLGGVAHIGGLSLVVGEEFELKVAMSY 877



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>BAAT_HUMAN (Q14032) Bile acid CoA:amino acid N-acyltransferase (EC 2.3.1.65)|
           (BAT) (BACAT) (Glycine N-choloyltransferase) (Long-chain
           fatty-acyl-CoA hydrolase) (EC 3.1.2.2)
          Length = 418

 Score = 32.0 bits (71), Expect = 0.36
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +3

Query: 294 PALCVRVVHHLRLHLDGPVAPHLAAEPY 377
           P  C    H LRLH  G V PH AA+ +
Sbjct: 370 PLCCASTTHDLRLHWGGEVIPHAAAQEH 397



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>THR_DROME (P42286) Protein three rows|
          Length = 1379

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -1

Query: 392 SDWSMVRFSCEMGSDGAIKVKSEVVHNSYAQSRTLVISKVVLMGHRS 252
           SD+ +V  + +M  D +I  K   VH+   Q R+L     + +GH S
Sbjct: 611 SDYHLVLLARQMRKDDSISKKCIEVHDKLRQQRSLSRMDNLCLGHAS 657



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>ATIN_HHV2H (P68336) Alpha trans-inducing protein (Vmw65) (ICP25) (VP16|
           protein) (Alpha-TIF)
          Length = 490

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 306 VRVVHHLRLHLDGPVAPHLAAEPYHAPIASP 398
           +R ++H+R HL+ P+    AAE   AP+ +P
Sbjct: 290 LRELNHIREHLNLPLVRSAAAEEPGAPLTTP 320



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>ATIN_HHV23 (P68335) Alpha trans-inducing protein (Vmw65) (ICP25) (VP16|
           protein) (Alpha-TIF)
          Length = 490

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +3

Query: 306 VRVVHHLRLHLDGPVAPHLAAEPYHAPIASP 398
           +R ++H+R HL+ P+    AAE   AP+ +P
Sbjct: 290 LRELNHIREHLNLPLVRSAAAEEPGAPLTTP 320


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,668,298
Number of Sequences: 219361
Number of extensions: 645069
Number of successful extensions: 1970
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1969
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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