>TROP_HUMAN (Q12816) Trophinin (MAGE-D3 antigen)|
          Length = 1387

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 19/48 (39%), Positives = 28/48 (58%)
 Frame = +1

Query: 295 GVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSGCSSDPSSLFRS 438
           GV PS SAS ++  S+S G  LS + S S+ ++   GC+   S+ F S
Sbjct: 716 GVAPSTSASFSNTASISFGGTLSTSSSFSSAASISFGCAHSTSTSFSS 763

>PPZ_SCHPO (P78968) Serine/threonine-protein phosphatase PP-Z (EC 3.1.3.16)|
          Length = 515

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 24/87 (27%), Positives = 37/87 (42%)
 Frame = +1

Query: 187 NQGMATTLPL*QPSTRKPGSGALMHHHNQT*HASSHGVKPSYSASLTSVISMSSGALLSG 366
           +Q   +  P  QP+   P + A  HHH+ +  +SS+ V P+   S TS   + S    + 
Sbjct: 96  SQSPTSPHPSNQPAMLSPSTAASQHHHHHS-SSSSYAVSPTSPTSPTSSGPIGSNFDSAS 154

Query: 367 THSGSTVSAPPSGCSSDPSSLFRSGFP 447
            H+G        G    P+S   S  P
Sbjct: 155 EHNGPVYPQDQQGPVIIPNSAISSTDP 181

>NP1L3_HUMAN (Q99457) Nucleosome assembly protein 1-like 3|
          Length = 506

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +1

Query: 286 SSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSGCSSDPSSLFR 435
           S  G +   S+S +S    SS +  SG+ SGS  S+  SG +S  S L+R
Sbjct: 27  SDSGEESDSSSSSSSTSDSSSSSSTSGSSSGSGSSSSSSGSTSSRSRLYR 76

>VILI2_ARATH (O81644) Villin-2|
          Length = 976

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
 Frame = -2

Query: 455 IDDGKPDLKSDDGS------DEQPDGGAETVDPECVPESKAPEDMDITDVK 321
           +DDGK D +SD G+         P G     D + VPES  P+   ITD K
Sbjct: 211 VDDGKLDTESDSGAFWVLFGGFAPIGRKVANDDDIVPESTPPKLYCITDGK 261

>ATX7_HUMAN (O15265) Ataxin-7 (Spinocerebellar ataxia type 7 protein)|
          Length = 892

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = +1

Query: 280 HASSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSGCSSDPSS 426
           H ++   +P+ S ++  V SM S  + S + S ST    PSG SS PSS
Sbjct: 621 HGTTLNAQPAASGAMDPVCSMQSRQVSSSSSSPST----PSGLSSVPSS 665

>PRY3_YEAST (P47033) Protein PRY3 (Pathogen related in Sc 3)|
          Length = 881

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 19/48 (39%), Positives = 28/48 (58%)
 Frame = +1

Query: 283 ASSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSGCSSDPSS 426
           ASS  V  SY+ S ++V+S  +    S T + S+V+   S  SSDP+S
Sbjct: 246 ASSSSVTTSYATSSSTVVSSDA---TSSTTTTSSVATSSSTTSSDPTS 290

>RPGR_MOUSE (Q9R0X5) X-linked retinitis pigmentosa GTPase regulator (mRpgr)|
          Length = 1001

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -2

Query: 425 DDGSDEQPDGGAETVDPECVPESKAPEDMDITDVK 321
           D   +E+ +G  E V+   +PE++  E +DITD K
Sbjct: 843 DTVEEERKEGEKEIVEEGSIPETEGSETIDITDEK 877

>SP96_DICDI (P14328) Spore coat protein SP96|
          Length = 600

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 20/49 (40%), Positives = 27/49 (55%)
 Frame = +1

Query: 307 SYSASLTSVISMSSGALLSGTHSGSTVSAPPSGCSSDPSSLFRSGFPSS 453
           S S++++S  S SS A  S + S ++ S   S  SS PSS   S  PSS
Sbjct: 441 SGSSAVSSSASGSSAASSSPSSSAASSSPSSSAASSSPSSSAASSSPSS 489



 Score = 29.3 bits (64), Expect = 5.0
 Identities = 24/76 (31%), Positives = 38/76 (50%)
 Frame = +1

Query: 199 ATTLPL*QPSTRKPGSGALMHHHNQT*HASSHGVKPSYSASLTSVISMSSGALLSGTHSG 378
           A++ P    ++  P S A     + +  +SS    PS SAS +S  S S+ +  + + S 
Sbjct: 456 ASSSPSSSAASSSPSSSAASSSPSSSAASSS----PSSSASSSSSPSSSASSSSAPSSSA 511

Query: 379 STVSAPPSGCSSDPSS 426
           S+ SAP S  SS  +S
Sbjct: 512 SSSSAPSSSASSSSAS 527

>TAB3_HUMAN (Q8N5C8) Mitogen-activated protein kinase kinase kinase|
           7-interacting protein 3 (TAK1-binding protein 3)
           (NF-kappa-B-activating protein 1)
          Length = 712

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 14/109 (12%)
 Frame = +1

Query: 172 NYYRKNQGMATTLPL*QPSTRKPGSGALMHHHNQT*HASSHG-VKPSYSASLTSVISM-- 342
           N   +N+ +   L +  PS+  PG GA ++      H+SS G + P ++A    +  +  
Sbjct: 64  NRMNRNRLLHINLGIHSPSSYHPGDGAQLNGGRTLVHSSSDGHIDPQHAAGKQLICLVQE 123

Query: 343 --SSGALLSGT---------HSGSTVSAPPSGCSSDPSSLFRSGFPSSI 456
             S+ A+++ T             + + PPS     PSS+     PS++
Sbjct: 124 PHSAPAVVAATPNYNPFFMNEQNRSAATPPSQPPQQPSSMQTGMNPSAM 172

>DP87_DICDI (Q04503) Prespore protein DP87 precursor|
          Length = 555

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +1

Query: 283 ASSHGVKPSYSASLTSVISM-SSGALLSGTHSGSTVSAPPSGCSSDPSSLFRSGFPSS 453
           +S+    PS SA+ ++  S  SS A  S   S ++ SAP S  SS PSS   S   SS
Sbjct: 484 SSAASSSPSSSAASSAASSEPSSSAASSSAPSSASSSAPSSASSSAPSSSASSSAASS 541

>CSPG5_CHICK (Q9DF69) Chondroitin sulfate proteoglycan 5 precursor (Acidic|
           leucine-rich EGF-like domain-containing brain protein)
           [Contains: Chondroitin sulfate proteoglycan 5, 38 kDa
           form; Chondroitin sulfate proteoglycan 5, 80 kDa form]
          Length = 594

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 452 DDGKPDLKSDDGSDEQPDGGAETVDPECVPESKAP 348
           DD + +L+ D+  +E+ DGG E  +    P S AP
Sbjct: 352 DDAEEELEEDEEEEEEEDGGLEDENGYRPPASAAP 386

>EP84_HCMVA (P17151) Early phosphoprotein p84|
          Length = 684

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 24/76 (31%), Positives = 34/76 (44%)
 Frame = +1

Query: 226 STRKPGSGALMHHHNQT*HASSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSG 405
           S+    S +  HHH+   H +           +T V + + GALL     G+ VS+P   
Sbjct: 316 SSSAVSSSSNNHHHHHHHHNA-----------VTDVAAGTDGALLLPIERGAVVSSP--- 361

Query: 406 CSSDPSSLFRSGFPSS 453
            S+ PSSL     PSS
Sbjct: 362 SSTSPSSLLSLPRPSS 377

>TAB3_MOUSE (Q571K4) Mitogen-activated protein kinase kinase kinase|
           7-interacting protein 3 (TAK1-binding protein 3)
          Length = 716

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 14/109 (12%)
 Frame = +1

Query: 172 NYYRKNQGMATTLPL*QPSTRKPGSGALMHHHNQT*HASSHG-VKPSYSASLTSVISM-- 342
           N   +N+ +   L +  PS+  PG GA ++      H+SS G + P ++A    +  +  
Sbjct: 64  NRMNRNRLLHINLGIHSPSSYHPGDGAHLNGGRTLVHSSSDGHIDPQHTAGKQLICLVQE 123

Query: 343 --SSGALLSGT---------HSGSTVSAPPSGCSSDPSSLFRSGFPSSI 456
             S+ A+++ T             + + PPS     PSS+     PS++
Sbjct: 124 PHSAPAVVAATPNYNPFFMNEQNRSAATPPSQPPQQPSSMQTGMNPSAM 172

>P3F2B_XENLA (P70030) POU domain, class 3, transcription factor 2-B|
           (Transcription factor POU3-B) (XLPOU3B)
          Length = 385

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
 Frame = +1

Query: 238 PGSGALMHHHN-QT*HASSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPS 402
           PGSG  MHHH  +  H   HG       S T         L  G H  S    P S
Sbjct: 154 PGSGQGMHHHGLRDSHDDHHGDHGHQQPSQTQQQQQQHSQLQGGHHDHSDEDTPTS 209

>WDR43_MOUSE (Q6ZQL4) WD-repeat protein 43 (Fragment)|
          Length = 665

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = -2

Query: 452 DDGKPDLKSDDGSDEQPDGGAETVDPECVPESKAPEDMDITDVKDAE 312
           DD  P+  SDD  DE  D  +E    E V E    ED D+ D ++ E
Sbjct: 595 DDEVPEKDSDDNWDEDEDKDSE--KDEGVDEDNEEEDEDMEDKEENE 639

>BYN_DROME (P55965) T-related protein (Trp) (Protein brachyenteron)|
          Length = 697

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
 Frame = +1

Query: 304 PSYSASLTSVISMSSGAL---LSGTHSGSTVSAPPSGCSSDPSSLFRSGFPS 450
           PS   + TS+ S S+G++   +S +  G   SAP +GC S  SS  +SGF S
Sbjct: 377 PSAPQTPTSLHSTSTGSVSTSVSSSSGGGIGSAPSTGCFS--SSYAQSGFMS 426

>GATA2_CHICK (P23824) GATA-binding factor 2 (GATA-2) (Transcription factor|
           NF-E1B)
          Length = 466

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 15/71 (21%)
 Frame = +1

Query: 259 HHHNQ---------T*HASSHG------VKPSYSASLTSVISMSSGALLSGTHSGSTVSA 393
           HHHN            H S+ G      V P  S S T+ +S  + A  SG+H       
Sbjct: 108 HHHNPWTVNPFTKTPLHPSAAGAPGAISVYPGSSTSSTASVSSLTPASHSGSHLFGFPPT 167

Query: 394 PPSGCSSDPSS 426
           PP   S DP+S
Sbjct: 168 PPKEVSPDPNS 178

>SRP40_YEAST (P32583) Suppressor protein SRP40|
          Length = 406

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 22/57 (38%), Positives = 28/57 (49%)
 Frame = +1

Query: 283 ASSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSGCSSDPSSLFRSGFPSS 453
           +SS     S S+S +S  S SSG   S + S S+ S+  S  SSD  S   S   SS
Sbjct: 28  SSSSSSSSSSSSSSSSSSSSSSGESSSSSSSSSSSSSSDSSDSSDSESSSSSSSSSS 84

>SERI1_BOMMO (P07856) Sericin 1 precursor (Silk gum protein)|
          Length = 1186

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
 Frame = +1

Query: 232  RKPGSGALMHHHNQT*HASSHGVKPSYSASLTSVISMSSGALLSGTHSGSTV-SAPPSGC 408
            RK GSG    H + T  +S+     + SAS T   S +SGA  + + S ST   +  S  
Sbjct: 1084 RKSGSG----HKSATVQSSTTDKTSTDSASSTDSTSSTSGASTTTSGSSSTSGGSSTSDA 1139

Query: 409  SSDPSSLFRS 438
            SS  SS+ RS
Sbjct: 1140 SSTSSSVSRS 1149

>CDSN_PANTR (Q7YR44) Corneodesmosin precursor (S protein)|
          Length = 529

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
 Frame = +1

Query: 235 KPGSGALMHHHNQT*HASSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSGCSS 414
           KPG+G     ++Q  ++S  G     ++  + + S SS +  SG+HSGS+ S   S  S 
Sbjct: 107 KPGTG-----YSQVSYSSGSGSSLQGASGSSQLGSSSSHSGSSGSHSGSSSSHSSSSSSF 161

Query: 415 D-PSSLFRSGFPSSI 456
              SS F+ G  S++
Sbjct: 162 QFSSSSFQVGNGSAL 176

>CDSN_HUMAN (Q15517) Corneodesmosin precursor (S protein)|
          Length = 529

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
 Frame = +1

Query: 235 KPGSGALMHHHNQT*HASSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSGCSS 414
           KPG+G     ++Q  ++S  G     ++  + + S SS +  SG+HSGS+ S   S  S 
Sbjct: 107 KPGTG-----YSQVSYSSGSGSSLQGASGSSQLGSSSSHSGSSGSHSGSSSSHSSSSSSF 161

Query: 415 D-PSSLFRSGFPSSI 456
              SS F+ G  S++
Sbjct: 162 QFSSSSFQVGNGSAL 176

>ATG1_YARLI (Q6C7U0) Serine/threonine-protein kinase ATG1 (EC 2.7.11.1)|
           (Autophagy-related protein 1)
          Length = 710

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +1

Query: 280 HASSHGVKPSYSASLTSVISMSSGALLSGTHSG--STVSAPPSGCSSDPS 423
           H S +G +        +   +S+GA LSGT SG  +T  +PP   ++ PS
Sbjct: 461 HGSGNGSRNGSGNGSGNGARLSAGAALSGTSSGTSTTGKSPPVPATTTPS 510


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,187,584
Number of Sequences: 219361
Number of extensions: 1284100
Number of successful extensions: 4077
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4046
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)