>ref|XM_866534.1| PREDICTED: Bos taurus hypothetical LOC528207, transcript variant 2
           (LOC528207), mRNA
          Length = 2283

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 156 ctacatttcctagtagtaacta 177
           ||||||||||||||||||||||
Sbjct: 611 ctacatttcctagtagtaacta 632

>ref|XM_606619.2| PREDICTED: Bos taurus hypothetical LOC528207, transcript variant 1
           (LOC528207), mRNA
          Length = 2250

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 156 ctacatttcctagtagtaacta 177
           ||||||||||||||||||||||
Sbjct: 611 ctacatttcctagtagtaacta 632

>ref|XM_878569.1| PREDICTED: Bos taurus hypothetical LOC528207, transcript variant 3
           (LOC528207), mRNA
          Length = 2280

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 156 ctacatttcctagtagtaacta 177
           ||||||||||||||||||||||
Sbjct: 611 ctacatttcctagtagtaacta 632

>ref|XM_794244.1| PREDICTED: Strongylocentrotus purpuratus similar to Zinc finger
            homeobox protein 1b (Smad interacting protein 1)
            (LOC594820), mRNA
          Length = 4092

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 119  gatctttctctgccaaagag 138
            ||||||||||||||||||||
Sbjct: 2968 gatctttctctgccaaagag 2987

>gb|AE008732.1| Salmonella typhimurium LT2, section 40 of 220 of the complete genome
          Length = 22407

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   gccctggatctttctctgcc 132
             ||||||||||||||||||||
Sbjct: 20869 gccctggatctttctctgcc 20888

>gb|AF286884.4| Homo sapiens chromosome 8 clone RP11-597D18 map 8p21-p11, complete
              sequence
          Length = 207519

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     tacatacacaaatatttaca 64
              ||||||||||||||||||||
Sbjct: 176081 tacatacacaaatatttaca 176062

>emb|CR749549.1| Homo sapiens mRNA; cDNA DKFZp686B0392 (from clone DKFZp686B0392)
          Length = 4650

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 45   tacatacacaaatatttaca 64
            ||||||||||||||||||||
Sbjct: 4436 tacatacacaaatatttaca 4455

>gb|AC091699.6| Homo sapiens chromosome 10 clone RP11-296D9, complete sequence
          Length = 196856

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     tacacaaatatttacatcag 68
              ||||||||||||||||||||
Sbjct: 158595 tacacaaatatttacatcag 158614

>gb|AC022026.7| Homo sapiens chromosome 10 clone RP11-506B4, complete sequence
          Length = 170834

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    tacacaaatatttacatcag 68
             ||||||||||||||||||||
Sbjct: 42759 tacacaaatatttacatcag 42778

>gb|AC087855.6| Homo sapiens chromosome 8, clone RP11-431M3, complete sequence
          Length = 161256

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     tacatacacaaatatttaca 64
              ||||||||||||||||||||
Sbjct: 121491 tacatacacaaatatttaca 121472

>gb|AC087671.9| Homo sapiens chromosome 8, clone RP11-597D18, complete sequence
          Length = 207503

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    tacatacacaaatatttaca 64
             ||||||||||||||||||||
Sbjct: 31440 tacatacacaaatatttaca 31459

>dbj|AK143483.1| Mus musculus 8 cells embryo 8 cells cDNA, RIKEN full-length enriched
            library, clone:E860012J18 product:unclassifiable, full
            insert sequence
          Length = 4247

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 41   tacctacatacacaaatatt 60
            ||||||||||||||||||||
Sbjct: 1608 tacctacatacacaaatatt 1589

>gb|AC126308.6| Homo sapiens 12 BAC RP11-586L15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 85752

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    acatacacaaatatttacat 65
             ||||||||||||||||||||
Sbjct: 74837 acatacacaaatatttacat 74818

>emb|AL929106.5| Mouse DNA sequence from clone RP23-446N16 on chromosome 2, complete
             sequence
          Length = 130872

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    tacctacatacacaaatatt 60
             ||||||||||||||||||||
Sbjct: 95435 tacctacatacacaaatatt 95416

>emb|AL663032.9| Mouse DNA sequence from clone RP23-27I6 on chromosome X, complete
              sequence
          Length = 162995

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 45     tacatacacaaatatttacatcag 68
              |||||||| |||||||||||||||
Sbjct: 160137 tacatacataaatatttacatcag 160160


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,926,772
Number of Sequences: 3902068
Number of extensions: 1926772
Number of successful extensions: 38918
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38901
Number of HSP's gapped (non-prelim): 17
length of query: 237
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 215
effective length of database: 17,147,199,772
effective search space: 3686647950980
effective search space used: 3686647950980
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)