Clone Name | rbastl09b02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | Y772_METJA (Q58182) Hypothetical protein MJ0772 | 28 | 5.6 | 2 | S13A1_RAT (Q07782) Solute carrier family 13 member 1 (Renal sodi... | 28 | 7.3 |
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>Y772_METJA (Q58182) Hypothetical protein MJ0772| Length = 353 Score = 28.1 bits (61), Expect = 5.6 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +1 Query: 19 YDVEDLQQWHYNKSRAGETASLKK 90 +DV D+++WHY KS L+K Sbjct: 137 FDVHDIRKWHYRKSFINFVKELRK 160
>S13A1_RAT (Q07782) Solute carrier family 13 member 1 (Renal sodium/sulfate| cotransporter) (Na(+)/sulfate cotransporter) (NaSi-1) Length = 595 Score = 27.7 bits (60), Expect = 7.3 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -3 Query: 100 TNPVFSSLLFPLLCSYCNAIVASPLHHTAP 11 +NP ++LFP+L AI +PLH P Sbjct: 489 SNPATITILFPILSPLAEAIHVNPLHILLP 518 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,079,106 Number of Sequences: 219361 Number of extensions: 717588 Number of successful extensions: 1570 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1554 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1570 length of database: 80,573,946 effective HSP length: 91 effective length of database: 60,612,095 effective search space used: 1454690280 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)