>MMTA2_RAT (Q5M9I6) Multiple myeloma tumor-associated protein 2 homolog|
          Length = 260

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +2

Query: 41  RHKLHQSHLRTLHKHQ--E*EQGPSADENKRQKNNDVHPCYPR 163
           +HK H+      HK +       PS    +RQ+++D  PCY R
Sbjct: 195 KHKKHKKKKDKEHKREADSCSSSPSPARPRRQRHSDFSPCYKR 237

>CUL7_MOUSE (Q8VE73) Cullin-7 (CUL-7) (p185) (p193) (Fragment)|
          Length = 913

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 21  ILNWLTLATSYIRVTLEHYINIKSKSRVRLRTKTNDKR 134
           +LN  T   +Y+R T+ HY N  SKS+ R   +   +R
Sbjct: 622 MLNPATCLPAYLRGTINHYTNFYSKSQSRSSLEKEPQR 659

>CED3_CAEEL (P42573) Cell death protein 3 precursor (EC 3.4.22.-) [Contains:|
           Cell death protein 3 subunit 1; Cell death protein 3
           subunit 2]
          Length = 503

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = -1

Query: 161 WDSKDGRRYSFVVCFRPQTDPALTLDVYVMF*GDSDVACGECKPIQYIS 15
           WD++DG  ++F+ C RPQ        V+      +D+        QY+S
Sbjct: 384 WDNRDGPLFNFLGCVRPQVQ-----QVWRKKPSQADILIAYATTAQYVS 427

>TRF5_ASHGO (Q9HFW3) Topoisomerase 1-related protein TRF5|
          Length = 626

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 219 QLQMNNQRARIK*PLPVPATGVVVICEP 302
           +LQ   +RAR+  P P PA  VVV+ +P
Sbjct: 548 ELQPPPKRARVPAPAPAPADNVVVLDDP 575

>GLI3_CHICK (P55879) Zinc finger protein GLI3 (Fragment)|
          Length = 663

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +2

Query: 71  TLHKHQE*EQGPSADENKRQKNNDVHPCYPRL 166
           +L KH +   GP A   K+Q+ NDVHP  P L
Sbjct: 377 SLRKHVKTVHGPDAHVTKKQR-NDVHPRPPPL 407

>PRP39_YEAST (P39682) Pre-mRNA-processing protein PRP39|
          Length = 629

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/46 (28%), Positives = 26/46 (56%)
 Frame = +3

Query: 21  ILNWLTLATSYIRVTLEHYINIKSKSRVRLRTKTNDKRITTSILAI 158
           IL   T  T  +  ++ +YIN +  ++V L+T  NDK ++  ++ +
Sbjct: 392 ILEKQTSFTKILETSITNYINNQIDAKVHLQTLINDKNLSIVVVEL 437

>VID21_NEUCR (Q7SBU6) Chromatin modification-related protein vid-21|
          Length = 2189

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +2

Query: 41   RHKLHQSHLRTLHK-HQE*EQGPSADENKRQKNNDVHPCYPRLPAWNP 181
            RH     + + LH+ HQ  +Q P   +  +Q+   VHP  P+LP   P
Sbjct: 1912 RHGQVHGNGQQLHQQHQHQQQQPQQAQQTQQQRQQVHPA-PQLPQAQP 1958


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,327,650
Number of Sequences: 219361
Number of extensions: 780336
Number of successful extensions: 1771
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1770
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 1391514312
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)