Clone Name | rbastl09a09 |
---|---|
Clone Library Name | barley_pub |
>PHOB_KLEPN (P45605) Phosphate regulon transcriptional regulatory protein phoB| Length = 229 Score = 29.3 bits (64), Expect = 2.5 Identities = 13/52 (25%), Positives = 24/52 (46%) Frame = +2 Query: 116 LIYLHGRHASKMYTKQTQLGKSWSSYLQISQVTVPASAFQLSGTLHSLGHDR 271 L++ H ++Y+++ L W + + + TV +L L GHDR Sbjct: 162 LLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEHSGHDR 213
>LECS_VATMA (P81371) Seed lectin (VML) [Contains: Seed lectin alpha chain; Seed| lectin gamma chain; Seed lectin beta chain] Length = 240 Score = 28.5 bits (62), Expect = 4.3 Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 2/85 (2%) Frame = +1 Query: 10 TSAKRISHSSSKDGRPRAHSLYS--YCSPNKTTR*TVTHLLTWTTCFKNVHQTNTTR*IL 183 TS ++ + KDG+P HSL Y +P + + ++ T F Sbjct: 27 TSKGKLQLTKVKDGKPVDHSLGRALYAAPIHIWDDSTDRVASFATSFS-----------F 75 Query: 184 VILPPDQSGHRSGVSFSVIRNSTQP 258 V+ PD+S G++F + TQP Sbjct: 76 VVEAPDESKTADGIAFFLAPPDTQP 100
>PHOB_SHIFL (P45607) Phosphate regulon transcriptional regulatory protein phoB| Length = 229 Score = 28.5 bits (62), Expect = 4.3 Identities = 13/52 (25%), Positives = 24/52 (46%) Frame = +2 Query: 116 LIYLHGRHASKMYTKQTQLGKSWSSYLQISQVTVPASAFQLSGTLHSLGHDR 271 L++ H ++Y+++ L W + + + TV +L L GHDR Sbjct: 162 LLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDR 213
>PHOB_SHIDY (P45606) Phosphate regulon transcriptional regulatory protein phoB| Length = 229 Score = 28.5 bits (62), Expect = 4.3 Identities = 13/52 (25%), Positives = 24/52 (46%) Frame = +2 Query: 116 LIYLHGRHASKMYTKQTQLGKSWSSYLQISQVTVPASAFQLSGTLHSLGHDR 271 L++ H ++Y+++ L W + + + TV +L L GHDR Sbjct: 162 LLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDR 213
>PHOB_ECOLI (P0AFJ5) Phosphate regulon transcriptional regulatory protein phoB| Length = 229 Score = 28.5 bits (62), Expect = 4.3 Identities = 13/52 (25%), Positives = 24/52 (46%) Frame = +2 Query: 116 LIYLHGRHASKMYTKQTQLGKSWSSYLQISQVTVPASAFQLSGTLHSLGHDR 271 L++ H ++Y+++ L W + + + TV +L L GHDR Sbjct: 162 LLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDR 213
>PHOB_ECO57 (P0AFJ6) Phosphate regulon transcriptional regulatory protein phoB| Length = 229 Score = 28.5 bits (62), Expect = 4.3 Identities = 13/52 (25%), Positives = 24/52 (46%) Frame = +2 Query: 116 LIYLHGRHASKMYTKQTQLGKSWSSYLQISQVTVPASAFQLSGTLHSLGHDR 271 L++ H ++Y+++ L W + + + TV +L L GHDR Sbjct: 162 LLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDR 213
>ADHA_CLOAB (Q04944) NADH-dependent butanol dehydrogenase A (EC 1.1.1.-) (BDH| I) Length = 389 Score = 28.1 bits (61), Expect = 5.7 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = +2 Query: 221 ASAFQLSGTLHSLGHDRKWDDHPV 292 AS+ ++G L SLG DRKW HP+ Sbjct: 247 ASSLAINGLL-SLGKDRKWSCHPM 269
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/46 (30%), Positives = 21/46 (45%) Frame = +2 Query: 185 SSYLQISQVTVPASAFQLSGTLHSLGHDRKWDDHPVPPVPIELDVP 322 S +L++ + A + T+HS H DDH V + DVP Sbjct: 131 SLFLELVSSELEAKTGKKKATVHSYAHKVDDDDHGVVTYEADFDVP 176
>PLSC_YEAST (P33333) Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase| (EC 2.3.1.51) (1-AGP acyltransferase) (1-AGPAT) (Lysophosphatidic acid acyltransferase) (LPAAT) Length = 303 Score = 27.3 bits (59), Expect = 9.7 Identities = 17/63 (26%), Positives = 26/63 (41%) Frame = +2 Query: 131 GRHASKMYTKQTQLGKSWSSYLQISQVTVPASAFQLSGTLHSLGHDRKWDDHPVPPVPIE 310 G A K+ + K I+ T+P A + + H ++K + PVP V I Sbjct: 228 GEFAEKVRDQMVDTLKEIGYSPAINDTTLPPQAIEYAALQHDKKVNKKIKNEPVPSVSIS 287 Query: 311 LDV 319 DV Sbjct: 288 NDV 290 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,898,936 Number of Sequences: 219361 Number of extensions: 957763 Number of successful extensions: 2295 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 2252 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2294 length of database: 80,573,946 effective HSP length: 87 effective length of database: 61,489,539 effective search space used: 1475748936 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)