Clone Name | rbastl09a03 |
---|---|
Clone Library Name | barley_pub |
>gb|AF200455.5| Homo sapiens chromosome 8 clone SCb-540n10 map p22-p21, complete sequence Length = 158653 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 taccttgctcaccatcatt 72 ||||||||||||||||||| Sbjct: 24883 taccttgctcaccatcatt 24865
>gb|AF233439.7| Homo sapiens chromosome 8 clones GS1-24F4, CTD-2629I16 map p23.1, complete sequences Length = 231283 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 taccttgctcaccatcatt 72 ||||||||||||||||||| Sbjct: 161974 taccttgctcaccatcatt 161956
>gb|AF205406.5| Homo sapiens chromosome 8 clone SCb-633e22 map p23.1, complete sequence Length = 168907 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 taccttgctcaccatcatt 72 ||||||||||||||||||| Sbjct: 114561 taccttgctcaccatcatt 114543
>gb|AC145802.2| Xenopus tropicalis clone CH216-80C17, complete sequence Length = 163910 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 16 agacactcatcatatctgg 34 ||||||||||||||||||| Sbjct: 84184 agacactcatcatatctgg 84166
>gb|AC099524.5| Homo sapiens chromosome 16 clone RP11-960L18, complete sequence Length = 184518 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 31 ctgggcacagcggccagca 49 ||||||||||||||||||| Sbjct: 22099 ctgggcacagcggccagca 22117
>gb|AC112156.4| Mus musculus BAC clone RP24-103D6 from chromosome 2, complete sequence Length = 175208 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 53 gtaccttgctcaccatcat 71 ||||||||||||||||||| Sbjct: 113991 gtaccttgctcaccatcat 113973
>ref|NM_001013253.1| Homo sapiens lymphocyte-specific protein 1 (LSP1), transcript variant 2, mRNA Length = 1842 Score = 38.2 bits (19), Expect = 7.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 31 ctgggcacagcggccagcaagcg 53 ||||||| ||||||||||||||| Sbjct: 164 ctgggcagagcggccagcaagcg 186
>gb|AC051649.21| Homo sapiens chromosome 11, clone RP11-534I22, complete sequence Length = 188519 Score = 38.2 bits (19), Expect = 7.9 Identities = 22/23 (95%) Strand = Plus / Minus Query: 31 ctgggcacagcggccagcaagcg 53 ||||||| ||||||||||||||| Sbjct: 129181 ctgggcagagcggccagcaagcg 129159
>emb|BX248357.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 4/8 Length = 349535 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 cattgatccaaatcatccg 87 ||||||||||||||||||| Sbjct: 195511 cattgatccaaatcatccg 195493
>gb|AC079018.10| Homo sapiens chromosome 8, clone RP11-161B1, complete sequence Length = 168702 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 taccttgctcaccatcatt 72 ||||||||||||||||||| Sbjct: 95791 taccttgctcaccatcatt 95773
>emb|CR625395.1| full-length cDNA clone CS0DI005YO10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1741 Score = 38.2 bits (19), Expect = 7.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 31 ctgggcacagcggccagcaagcg 53 ||||||| ||||||||||||||| Sbjct: 164 ctgggcagagcggccagcaagcg 186
>emb|CR622813.1| full-length cDNA clone CS0DI028YL12 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1721 Score = 38.2 bits (19), Expect = 7.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 31 ctgggcacagcggccagcaagcg 53 ||||||| ||||||||||||||| Sbjct: 145 ctgggcagagcggccagcaagcg 167
>emb|CR604737.1| full-length cDNA clone CS0DE002YL14 of Placenta of Homo sapiens (human) Length = 1696 Score = 38.2 bits (19), Expect = 7.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 31 ctgggcacagcggccagcaagcg 53 ||||||| ||||||||||||||| Sbjct: 107 ctgggcagagcggccagcaagcg 129
>emb|CR603863.1| full-length cDNA clone CS0DI004YE02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1734 Score = 38.2 bits (19), Expect = 7.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 31 ctgggcacagcggccagcaagcg 53 ||||||| ||||||||||||||| Sbjct: 142 ctgggcagagcggccagcaagcg 164
>emb|CR601725.1| full-length cDNA clone CS0DI044YK18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1726 Score = 38.2 bits (19), Expect = 7.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 31 ctgggcacagcggccagcaagcg 53 ||||||| ||||||||||||||| Sbjct: 116 ctgggcagagcggccagcaagcg 138
>dbj|AP007162.1| Aspergillus oryzae RIB40 genomic DNA, SC102 Length = 1779707 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 133 acatacggtacatacatcc 151 ||||||||||||||||||| Sbjct: 149403 acatacggtacatacatcc 149385
>gb|AC098966.3| Homo sapiens chromosome 16 clone RP11-465H19, complete sequence Length = 164925 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 31 ctgggcacagcggccagca 49 ||||||||||||||||||| Sbjct: 76996 ctgggcacagcggccagca 77014
>gb|AC156553.17| Mus musculus chromosome 8, clone RP23-106I21, complete sequence Length = 211915 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 19 cactcatcatatctgggca 37 ||||||||||||||||||| Sbjct: 36649 cactcatcatatctgggca 36667
>emb|AL139300.6|CNS01DXG Human chromosome 14 DNA sequence BAC R-894P9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 191563 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 30 tctgggcacagcggccagc 48 ||||||||||||||||||| Sbjct: 139466 tctgggcacagcggccagc 139448
>dbj|AP006462.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-813O18, complete sequence Length = 98815 Score = 38.2 bits (19), Expect = 7.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 31 ctgggcacagcggccagcaagcg 53 ||||||| ||||||||||||||| Sbjct: 63404 ctgggcagagcggccagcaagcg 63426
>gb|AC114589.30| Mus musculus chromosome 8, clone RP23-365O13, complete sequence Length = 213866 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 19 cactcatcatatctgggca 37 ||||||||||||||||||| Sbjct: 210468 cactcatcatatctgggca 210486
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 130 gacacatacggtacataca 148 ||||||||||||||||||| Sbjct: 2944782 gacacatacggtacataca 2944764
>gb|AF314060.3| Homo sapiens chromosome 8 clone XXpac-GS1-i2046 map p23.1, complete sequence Length = 79317 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 54 taccttgctcaccatcatt 72 ||||||||||||||||||| Sbjct: 35639 taccttgctcaccatcatt 35621
>emb|AL844844.8| Mouse DNA sequence from clone RP23-103D7 on chromosome 2, complete sequence Length = 213953 Score = 38.2 bits (19), Expect = 7.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 gtaccttgctcaccatcat 71 ||||||||||||||||||| Sbjct: 151450 gtaccttgctcaccatcat 151468
>emb|AL833797.6| Mouse DNA sequence from clone RP23-89B11 on chromosome 2, complete sequence Length = 165400 Score = 38.2 bits (19), Expect = 7.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 107 tggctgcctgcccagttgaaatc 129 ||||||| ||||||||||||||| Sbjct: 69301 tggctgcatgcccagttgaaatc 69323 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 975,433 Number of Sequences: 3902068 Number of extensions: 975433 Number of successful extensions: 86184 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 25 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86108 Number of HSP's gapped (non-prelim): 76 length of query: 164 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 142 effective length of database: 17,147,199,772 effective search space: 2434902367624 effective search space used: 2434902367624 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)