Clone Name | rbastl06h11 |
---|---|
Clone Library Name | barley_pub |
>DRL21_ARATH (Q9LRR5) Putative disease resistance protein At3g14460| Length = 1424 Score = 30.0 bits (66), Expect = 1.6 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = +1 Query: 112 GLHNTDPIEKSAPDRCDKLQVPVWQQVNRLRLLGVQACT 228 G H+T IE CDKLQ+ + + + L L + +C+ Sbjct: 1356 GFHDTKAIETMEISGCDKLQISIDEDLPPLSCLRISSCS 1394
>IRX6_MOUSE (Q9ER75) Iroquois-class homeodomain protein IRX-6 (Iroquois| homeobox protein 6) (Homeodomain protein IRXB3) Length = 438 Score = 29.3 bits (64), Expect = 2.6 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = -2 Query: 209 SSLNRLTCCQTGTWSLSQRSGADFSIGSVLCNPY 108 S+ + TCC+T S+S + A S ++ C PY Sbjct: 19 SASSSATCCETAPRSVSDVASASTSASTLCCTPY 52
>UL52_SHV21 (P14346) Helicase/primase complex protein (Probable DNA replication| gene 56 protein) Length = 835 Score = 28.9 bits (63), Expect = 3.5 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%) Frame = +2 Query: 20 TEPDSTYVLTDRLTSTGDHK--HRNLHHCYIY 109 T+ DS ++TD LT T + + LH+CYIY Sbjct: 17 TDGDSAEIITDILTGTDTNAFIYSVLHNCYIY 48
>FA5_HUMAN (P12259) Coagulation factor V precursor (Activated protein C| cofactor) [Contains: Coagulation factor V heavy chain; Coagulation factor V light chain] Length = 2224 Score = 28.9 bits (63), Expect = 3.5 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Frame = +1 Query: 79 TSQSTPLLHIYGLH---NTDPIEKSAPDRCDKLQVPVWQQVNRLRLLGVQACTARSAE 243 T+ +PL H+ G + N+ E S+P D ++ P+ V +RLL + A +S E Sbjct: 804 TTAGSPLRHLIGKNSVLNSSTAEHSSPYSEDPIEDPLQPDVTGIRLLSLGAGEFKSQE 861
>PA21B_CANFA (P06596) Phospholipase A2 precursor (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) (Group IB phospholipase A2) Length = 146 Score = 28.1 bits (61), Expect = 5.9 Identities = 20/61 (32%), Positives = 26/61 (42%) Frame = -2 Query: 188 CCQTGTWSLSQRSGADFSIGSVLCNPYICSSGVDCDVYDLL*KLTCLSKHMYCQAPCSPC 9 CCQT S+ D S +L NPY C ++ TC SK+ CQA C Sbjct: 66 CCQTHDHCYSEAKKLD-SCKFLLDNPYTKIYSYSCSGSEI----TCSSKNKDCQAFICNC 120 Query: 8 E 6 + Sbjct: 121 D 121
>CP2D9_MOUSE (P11714) Cytochrome P450 2D9 (EC 1.14.14.1) (CYPIID9)| (P450-16-alpha) (CA) (Testosterone 16-alpha hydroxylase) Length = 504 Score = 28.1 bits (61), Expect = 5.9 Identities = 14/22 (63%), Positives = 16/22 (72%), Gaps = 1/22 (4%) Frame = +2 Query: 236 QPRPSSSGVYTILRHP-PYDGC 298 QP+PS+SGVY IL P PY C Sbjct: 475 QPQPSNSGVYGILVAPSPYQLC 496
>WNT11_XENLA (P49893) Protein Wnt-11 precursor (XWnt-11)| Length = 353 Score = 27.7 bits (60), Expect = 7.7 Identities = 15/57 (26%), Positives = 22/57 (38%) Frame = -2 Query: 176 GTWSLSQRSGADFSIGSVLCNPYICSSGVDCDVYDLL*KLTCLSKHMYCQAPCSPCE 6 G++ R S+GS CN C G + ++ + C H C C CE Sbjct: 289 GSYGTQDRLCNKTSVGSDSCNLMCCGRGYNAYTETIVERCQC-KYHWCCYVMCKKCE 344
>ATR_ARATH (Q9FKS4) Serine/threonine-protein kinase ATR (EC 2.7.11.1)| (DNA-repair protein ATR) (AtATR) (Ataxia telangiectasia-mutated and Rad3-related homolog) (Rad3-like protein) (AtRAD3) Length = 2702 Score = 27.7 bits (60), Expect = 7.7 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = -2 Query: 215 TPSSLNRLTCCQTGTWS-LSQRSGADFSIGS 126 TPSSL + C G W+ L + G+DF I S Sbjct: 583 TPSSLVKSKCLSVGIWTKLGLQDGSDFDIFS 613 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,910,667 Number of Sequences: 219361 Number of extensions: 897349 Number of successful extensions: 2029 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1975 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2029 length of database: 80,573,946 effective HSP length: 76 effective length of database: 63,902,510 effective search space used: 1533660240 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)