Clone Name | rbastl06h11 |
---|---|
Clone Library Name | barley_pub |
>gb|AC009847.9| Drosophila melanogaster clone BACR03L10, complete sequence Length = 180498 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 4 cactcacaagggctgcacggag 25 |||||||||||||||||||||| Sbjct: 126328 cactcacaagggctgcacggag 126307
>gb|AE003785.4| Drosophila melanogaster chromosome 2R, section 4 of 73 of the complete sequence Length = 301132 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 4 cactcacaagggctgcacggag 25 |||||||||||||||||||||| Sbjct: 206634 cactcacaagggctgcacggag 206655
>emb|AL139278.12| Human DNA sequence from clone RP4-639D23 on chromosome Xp21.1-21.3 Contains part of the DMD gene for dystrophin (muscular dystrophy, Duchenne and Becker types), complete sequence Length = 95866 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 101 tacatatatatgggttacaca 121 ||||||||||||||||||||| Sbjct: 65632 tacatatatatgggttacaca 65612
>ref|NM_022003.1| Homo sapiens FXYD domain containing ion transport regulator 6 (FXYD6), mRNA Length = 1677 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 1490 caagggctgcacggagcctg 1471
>gb|BC018652.2| Homo sapiens FXYD domain containing ion transport regulator 6, mRNA (cDNA clone MGC:2369 IMAGE:2822864), complete cds Length = 1850 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 1649 caagggctgcacggagcctg 1630
>gb|AY358976.1| Homo sapiens clone DNA57693 FXYD6 (UNQ521) mRNA, complete cds Length = 1657 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 1475 caagggctgcacggagcctg 1456
>emb|AL832811.1|HSM804122 Homo sapiens mRNA; cDNA DKFZp667P0423 (from clone DKFZp667P0423) Length = 1761 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 1557 caagggctgcacggagcctg 1538
>emb|CR858829.1| Pongo pygmaeus mRNA; cDNA DKFZp468P1427 (from clone DKFZp468P1427) Length = 1762 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 1563 caagggctgcacggagcctg 1544
>emb|AL136699.1|HSM801667 Homo sapiens mRNA; cDNA DKFZp564I1782 (from clone DKFZp564I1782) Length = 1647 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 1455 caagggctgcacggagcctg 1436
>gb|AC011490.7| Homo sapiens chromosome 19 clone CTB-179L3, complete sequence Length = 115289 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 atccaccttatgatgggtgt 298 |||||||||||||||||||| Sbjct: 104325 atccaccttatgatgggtgt 104344
>emb|CR625268.1| full-length cDNA clone CS0DB001YB19 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1354 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 1187 caagggctgcacggagcctg 1168
>emb|CR623064.1| full-length cDNA clone CS0DF032YM19 of Fetal brain of Homo sapiens (human) Length = 1656 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 1497 caagggctgcacggagcctg 1478
>emb|CR618856.1| full-length cDNA clone CS0DA004YH16 of Neuroblastoma of Homo sapiens (human) Length = 1592 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 1431 caagggctgcacggagcctg 1412
>emb|CR618485.1| full-length cDNA clone CL0BB017ZF02 of Neuroblastoma of Homo sapiens (human) Length = 1602 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 1421 caagggctgcacggagcctg 1402
>emb|CR617323.1| full-length cDNA clone CS0DF011YP12 of Fetal brain of Homo sapiens (human) Length = 1797 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 1613 caagggctgcacggagcctg 1594
>emb|CR614352.1| full-length cDNA clone CS0DF026YG15 of Fetal brain of Homo sapiens (human) Length = 1592 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 1496 caagggctgcacggagcctg 1477
>emb|CR611517.1| full-length cDNA clone CS0DF004YG14 of Fetal brain of Homo sapiens (human) Length = 1657 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 1498 caagggctgcacggagcctg 1479
>emb|CR611120.1| full-length cDNA clone CS0DF022YM03 of Fetal brain of Homo sapiens (human) Length = 1680 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 1497 caagggctgcacggagcctg 1478
>emb|CR609230.1| full-length cDNA clone CS0DF002YD24 of Fetal brain of Homo sapiens (human) Length = 1663 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 1497 caagggctgcacggagcctg 1478
>emb|CR608496.1| full-length cDNA clone CS0DN001YJ16 of Adult brain of Homo sapiens (human) Length = 1584 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 1431 caagggctgcacggagcctg 1412
>dbj|AK092198.1| Homo sapiens cDNA FLJ34879 fis, clone NT2NE2015712 Length = 2540 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 2358 caagggctgcacggagcctg 2339
>emb|CR606899.1| full-length cDNA clone CS0DF015YH21 of Fetal brain of Homo sapiens (human) Length = 1666 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 1514 caagggctgcacggagcctg 1495
>emb|CR604957.1| full-length cDNA clone CS0DF034YI11 of Fetal brain of Homo sapiens (human) Length = 1562 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 1431 caagggctgcacggagcctg 1412
>emb|CR604290.1| full-length cDNA clone CS0DA007YH20 of Neuroblastoma of Homo sapiens (human) Length = 1585 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 1431 caagggctgcacggagcctg 1412
>emb|CR603146.1| full-length cDNA clone CS0DF019YI20 of Fetal brain of Homo sapiens (human) Length = 1653 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 1497 caagggctgcacggagcctg 1478
>emb|CR600841.1| full-length cDNA clone CS0DF024YH23 of Fetal brain of Homo sapiens (human) Length = 1664 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 1497 caagggctgcacggagcctg 1478
>emb|CR597623.1| full-length cDNA clone CS0DI029YG18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1729 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 1576 caagggctgcacggagcctg 1557
>emb|CR593024.1| full-length cDNA clone CS0DC027YI13 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1634 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 1476 caagggctgcacggagcctg 1457
>dbj|AB169678.1| Macaca fascicularis brain cDNA, clone: QccE-17168, similar to human FXYD domain containing ion transport regulator 6(FXYD6), mRNA, RefSeq: NM_022003.1 Length = 1755 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 1552 caagggctgcacggagcctg 1533
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 acagtacatatgttttgaca 49 |||||||||||||||||||| Sbjct: 16056633 acagtacatatgttttgaca 16056652
>gb|BC093040.1| Homo sapiens FXYD domain containing ion transport regulator 6, mRNA (cDNA clone MGC:110994 IMAGE:6526843), complete cds Length = 1677 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 1480 caagggctgcacggagcctg 1461
>dbj|AP003512.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0618D11 Length = 150103 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 acagtacatatgttttgaca 49 |||||||||||||||||||| Sbjct: 85362 acagtacatatgttttgaca 85381
>dbj|AP000757.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-728F11, complete sequences Length = 184926 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 caagggctgcacggagcctg 29 |||||||||||||||||||| Sbjct: 81594 caagggctgcacggagcctg 81613
>gb|AC005335.1|AC005335 Homo sapiens chromosome 19, cosmid R34296, complete sequence Length = 47003 Score = 40.1 bits (20), Expect = 4.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 atccaccttatgatgggtgt 298 |||||||||||||||||||| Sbjct: 47002 atccaccttatgatgggtgt 46983 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,387,507 Number of Sequences: 3902068 Number of extensions: 2387507 Number of successful extensions: 34060 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 34 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 34017 Number of HSP's gapped (non-prelim): 43 length of query: 303 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 281 effective length of database: 17,147,199,772 effective search space: 4818363135932 effective search space used: 4818363135932 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)