Clone Name | rbastl06h10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PCY1_YEAST (P13259) Choline-phosphate cytidylyltransferase (EC 2... | 28 | 6.9 | 2 | HTPX2_SULAC (Q4JBJ9) Probable protease htpX homolog 2 (EC 3.4.24.-) | 28 | 6.9 |
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>PCY1_YEAST (P13259) Choline-phosphate cytidylyltransferase (EC 2.7.7.15)| (Phosphorylcholine transferase) (CTP:phosphocholine cytidylyltransferase) (CT) (CCT) Length = 424 Score = 28.1 bits (61), Expect = 6.9 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +2 Query: 35 KLRKYAPQGYKYMIQCGDDTIRMQLDALF 121 +LRKY P+G+++ + D IR+ D +F Sbjct: 84 ELRKYRPKGFRFNLPPTDRPIRIYADGVF 112
>HTPX2_SULAC (Q4JBJ9) Probable protease htpX homolog 2 (EC 3.4.24.-)| Length = 320 Score = 28.1 bits (61), Expect = 6.9 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +3 Query: 45 NMRHRDTST*SSVEMIPSECNWMPYSV 125 ++RHRDT +V +IP+ W+ YS+ Sbjct: 139 HLRHRDTEILLAVSLIPTLMYWLGYSL 165 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,117,482 Number of Sequences: 219361 Number of extensions: 348085 Number of successful extensions: 902 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 900 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 902 length of database: 80,573,946 effective HSP length: 26 effective length of database: 74,870,560 effective search space used: 1796893440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)