Clone Name | rbastl06h06 |
---|---|
Clone Library Name | barley_pub |
>gb|AC112205.2| Homo sapiens chromosome 5 clone RP11-80G7, complete sequence Length = 137376 Score = 44.1 bits (22), Expect = 0.28 Identities = 22/22 (100%) Strand = Plus / Plus Query: 252 tttgttctctgtatgcttcctt 273 |||||||||||||||||||||| Sbjct: 98239 tttgttctctgtatgcttcctt 98260
>gb|AE002147.1| Ureaplasma parvum serovar 3 str. ATCC 700970 section 48 of 59 of the complete genome Length = 27093 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 72 aattacattgcatgatgaaaaagat 96 ||||||||| ||||||||||||||| Sbjct: 21241 aattacattccatgatgaaaaagat 21217
>ref|XM_500068.1| Yarrowia lipolytica CLIB122, YALI0A14707g predicted mRNA Length = 4935 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 agaaatgtactgcgttccaa 36 |||||||||||||||||||| Sbjct: 2799 agaaatgtactgcgttccaa 2780
>emb|BX897700.1| Bartonella quintana str. Toulouse, complete genome Length = 1581384 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 attgcatgatgaaaaagatc 97 |||||||||||||||||||| Sbjct: 237598 attgcatgatgaaaaagatc 237617
>gb|AC093811.3| Homo sapiens BAC clone RP11-355H11 from 4, complete sequence Length = 115335 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ttgcatgatgaaaaagatca 98 |||||||||||||||||||| Sbjct: 85230 ttgcatgatgaaaaagatca 85211
>emb|BX548049.9| Zebrafish DNA sequence from clone DKEY-217J16 in linkage group 25, complete sequence Length = 175348 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 ttacattgcatgatgaaaaa 93 |||||||||||||||||||| Sbjct: 10660 ttacattgcatgatgaaaaa 10641
>gb|AC150259.4| Aedes aegypti, clone XX-10B1, complete sequence Length = 206579 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 tcaaaaaatctgtgcagcaa 57 |||||||||||||||||||| Sbjct: 187083 tcaaaaaatctgtgcagcaa 187102
>gb|AC099860.13| Mus musculus chromosome 1, clone RP23-5C23, complete sequence Length = 230538 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 tctgagctactcttgtctcc 156 |||||||||||||||||||| Sbjct: 210828 tctgagctactcttgtctcc 210847
>gb|AC162298.4| Mus musculus chromosome 1, clone RP24-285P15, complete sequence Length = 138146 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 tctgagctactcttgtctcc 156 |||||||||||||||||||| Sbjct: 41457 tctgagctactcttgtctcc 41476
>dbj|AK115834.1| Ciona intestinalis cDNA, clone:cilv028l15, full insert sequence Length = 872 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 atgcttccttgggatccaca 283 |||||||||||||||||||| Sbjct: 603 atgcttccttgggatccaca 622
>emb|BX000434.11| Zebrafish DNA sequence from clone CH211-2E18, complete sequence Length = 179109 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 cccacaataattacattgca 83 |||||||||||||||||||| Sbjct: 63234 cccacaataattacattgca 63253
>emb|AL844521.15| Zebrafish DNA sequence from clone DKEY-155O15 in linkage group 19, complete sequence Length = 213269 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 agattaggctatgatcctca 133 |||||||||||||||||||| Sbjct: 135251 agattaggctatgatcctca 135270
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 agaaatgtactgcgttccaa 36 |||||||||||||||||||| Sbjct: 1498826 agaaatgtactgcgttccaa 1498845
>emb|AL117191.6|CNS01DRG Human chromosome 14 DNA sequence BAC C-2303G14 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 155307 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 aaattagattaggctatgat 128 |||||||||||||||||||| Sbjct: 88636 aaattagattaggctatgat 88617 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,143,912 Number of Sequences: 3902068 Number of extensions: 3143912 Number of successful extensions: 50605 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 50569 Number of HSP's gapped (non-prelim): 36 length of query: 334 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 312 effective length of database: 17,147,199,772 effective search space: 5349926328864 effective search space used: 5349926328864 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)