Clone Name | rbastl06h01 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | QUEA_THIDN (Q30PZ7) S-adenosylmethionine:tRNA ribosyltransferase... | 29 | 3.8 | 2 | XKR2_MOUSE (Q5GH68) XK-related protein 2 (X Kell blood group-rel... | 28 | 8.6 |
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>QUEA_THIDN (Q30PZ7) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC| 5.-.-.-) (Queuosine biosynthesis protein queA) Length = 342 Score = 29.3 bits (64), Expect = 3.8 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = +2 Query: 92 RKSDGLSHVAFFDPSYILPPYQNNCLNFVLILV*NCTK-LKTLILGQF*DGGSISRQLSL 268 R SD +SHV F+D +P NC L+ N TK +K + GQ GG I ++ Sbjct: 38 RASDEISHVHFYDFEKFIP---KNC-----ALIFNDTKVIKARLFGQKESGGKIELLINR 89 Query: 269 GSTSGAIH 292 + IH Sbjct: 90 ALDAHNIH 97
>XKR2_MOUSE (Q5GH68) XK-related protein 2 (X Kell blood group-related,| X-linked) Length = 449 Score = 28.1 bits (61), Expect = 8.6 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +3 Query: 309 PLRARCSNNQEDYEHSICSTMPTQDR 386 PLR+ +NN DY H IC P +R Sbjct: 407 PLRSLFTNNVVDYLHCICCRRPRPER 432 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,349,117 Number of Sequences: 219361 Number of extensions: 1106345 Number of successful extensions: 2087 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2055 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2087 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)