Clone Name | rbastl06g12 |
---|---|
Clone Library Name | barley_pub |
>gb|AY220737.1| Hordeum vulgare lipoxygenase 1 protein (LOXA) mRNA, partial cds Length = 1331 Score = 406 bits (205), Expect = e-110 Identities = 208/209 (99%) Strand = Plus / Minus Query: 10 ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 69 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1228 ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 1169 Query: 70 agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1168 agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 1109 Query: 130 ccatggttgccgatggcttaaattaaatggagatgctgttggggatgcccttggcggtaa 189 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1108 ccatggttgccgatggcttaaattagatggagatgctgttggggatgcccttggcggtaa 1049 Query: 190 gcccggcagcggcgcccttgtggtcggag 218 ||||||||||||||||||||||||||||| Sbjct: 1048 gcccggcagcggcgcccttgtggtcggag 1020
>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds Length = 2818 Score = 398 bits (201), Expect = e-108 Identities = 207/209 (99%) Strand = Plus / Minus Query: 10 ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 69 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2799 ggaagcaaatctgctttatttattcggcttaaagagcaactgctgacatagtactgtcac 2740 Query: 70 agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2739 agacacacactacaccaatctctcgacaagtttcgtacgtggcgaacgccctttattcat 2680 Query: 130 ccatggttgccgatggcttaaattaaatggagatgctgttggggatgcccttggcggtaa 189 |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct: 2679 ccatggttgccgatggcttagattagatggagatgctgttggggatgcccttggcggtaa 2620 Query: 190 gcccggcagcggcgcccttgtggtcggag 218 ||||||||||||||||||||||||||||| Sbjct: 2619 gcccggcagcggcgcccttgtggtcggag 2591
>gb|BT008992.1| Triticum aestivum clone wdk2c.pk011.j13:fis, full insert mRNA sequence Length = 1020 Score = 93.7 bits (47), Expect = 2e-16 Identities = 59/63 (93%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 215 |||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| ||| Sbjct: 749 atggagatgctgttggggatgcccttagcggtgagcccggcggcggcgcccttgtgatcg 690 Query: 216 gag 218 ||| Sbjct: 689 gag 687
>ref|XM_469655.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2613 Score = 77.8 bits (39), Expect = 1e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 215 |||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 2609 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 2550 Query: 216 gag 218 ||| Sbjct: 2549 gag 2547
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 77.8 bits (39), Expect = 1e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 215 |||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 30026445 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 30026386 Query: 216 gag 218 ||| Sbjct: 30026385 gag 30026383 Score = 61.9 bits (31), Expect = 8e-07 Identities = 43/47 (91%) Strand = Plus / Minus Query: 159 gagatgctgttggggatgcccttggcggtaagcccggcagcggcgcc 205 ||||||||||||||||||||||||||||| | ||||| |||||||| Sbjct: 27803100 gagatgctgttggggatgcccttggcggtgatgccggcggcggcgcc 27803054 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggtaagccc 193 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 27821682 atggagatgctgttggggatgcccatggcggtgagccc 27821645 Score = 48.1 bits (24), Expect = 0.011 Identities = 27/28 (96%) Strand = Plus / Plus Query: 154 aaatggagatgctgttggggatgccctt 181 |||||| ||||||||||||||||||||| Sbjct: 14300020 aaatggtgatgctgttggggatgccctt 14300047
>emb|X64396.1|OSLRNA O.sativa mRNA for lipoxygenase L-2 Length = 2830 Score = 77.8 bits (39), Expect = 1e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 215 |||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 2691 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 2632 Query: 216 gag 218 ||| Sbjct: 2631 gag 2629
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 77.8 bits (39), Expect = 1e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 156 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 215 |||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 81306 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 81365 Query: 216 gag 218 ||| Sbjct: 81366 gag 81368
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 77.8 bits (39), Expect = 1e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 215 |||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 30117867 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 30117808 Query: 216 gag 218 ||| Sbjct: 30117807 gag 30117805 Score = 61.9 bits (31), Expect = 8e-07 Identities = 43/47 (91%) Strand = Plus / Minus Query: 159 gagatgctgttggggatgcccttggcggtaagcccggcagcggcgcc 205 ||||||||||||||||||||||||||||| | ||||| |||||||| Sbjct: 27894424 gagatgctgttggggatgcccttggcggtgatgccggcggcggcgcc 27894378 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggtaagccc 193 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 27913006 atggagatgctgttggggatgcccatggcggtgagccc 27912969 Score = 48.1 bits (24), Expect = 0.011 Identities = 27/28 (96%) Strand = Plus / Plus Query: 154 aaatggagatgctgttggggatgccctt 181 |||||| ||||||||||||||||||||| Sbjct: 14294995 aaatggtgatgctgttggggatgccctt 14295022
>dbj|AK073529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E17, full insert sequence Length = 2928 Score = 77.8 bits (39), Expect = 1e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtcg 215 |||||||||||||||||||||||| |||||| || ||||||||| |||||||| ||||| Sbjct: 2724 atggagatgctgttggggatgcccctggcggagaggccggcagcgtcgcccttgaggtcg 2665 Query: 216 gag 218 ||| Sbjct: 2664 gag 2662
>gb|AY720897.2| Triticum aestivum lipoxygenase gene, partial sequence Length = 934 Score = 73.8 bits (37), Expect = 2e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 162 atgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtc 214 |||||||||||||||||||||||||| || ||||| ||||| ||||||||||| Sbjct: 1 atgctgttggggatgcccttggcggtgaggccggcggcggcacccttgtggtc 53
>gb|AF465643.1| Zea mays B73 lipoxygenase gene, complete cds Length = 5013 Score = 69.9 bits (35), Expect = 3e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtc 214 ||||||||||||||||||||||||||||| || ||||| || |||||||| ||||||| Sbjct: 4658 atggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggtc 4600
>gb|AF329371.1|AF329371 Zea mays lipoxygenase mRNA, complete cds Length = 2595 Score = 69.9 bits (35), Expect = 3e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtc 214 ||||||||||||||||||||||||||||| || ||||| || |||||||| ||||||| Sbjct: 2591 atggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggtc 2533
>gb|AF149803.1|AF149803 Zea mays lipoxygenase mRNA, lipoxygenase-L2 allele, partial cds Length = 2267 Score = 69.9 bits (35), Expect = 3e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggtaagcccggcagcggcgcccttgtggtc 214 ||||||||||||||||||||||||||||| || ||||| || |||||||| ||||||| Sbjct: 2060 atggagatgctgttggggatgcccttggcagtgagccctgcggcggcgccactgtggtc 2002
>ref|XM_469409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2601 Score = 61.9 bits (31), Expect = 8e-07 Identities = 43/47 (91%) Strand = Plus / Minus Query: 159 gagatgctgttggggatgcccttggcggtaagcccggcagcggcgcc 205 ||||||||||||||||||||||||||||| | ||||| |||||||| Sbjct: 2594 gagatgctgttggggatgcccttggcggtgatgccggcggcggcgcc 2548
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16 map S2606, complete sequence Length = 124140 Score = 61.9 bits (31), Expect = 8e-07 Identities = 43/47 (91%) Strand = Plus / Minus Query: 159 gagatgctgttggggatgcccttggcggtaagcccggcagcggcgcc 205 ||||||||||||||||||||||||||||| | ||||| |||||||| Sbjct: 47230 gagatgctgttggggatgcccttggcggtgatgccggcggcggcgcc 47184 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggtaagccc 193 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 65812 atggagatgctgttggggatgcccatggcggtgagccc 65775
>gb|AC097368.3| Oryza sativa chromosome 3 BAC OSJNBb0017F17 genomic sequence, complete sequence Length = 119329 Score = 61.9 bits (31), Expect = 8e-07 Identities = 43/47 (91%) Strand = Plus / Plus Query: 159 gagatgctgttggggatgcccttggcggtaagcccggcagcggcgcc 205 ||||||||||||||||||||||||||||| | ||||| |||||||| Sbjct: 10793 gagatgctgttggggatgcccttggcggtgatgccggcggcggcgcc 10839
>ref|XM_469412.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2686 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggtaagccc 193 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 2442 atggagatgctgttggggatgcccatggcggtgagccc 2405
>ref|XM_469411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3165 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggtaagccc 193 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 2921 atggagatgctgttggggatgcccatggcggtgagccc 2884
>gb|DQ389164.1| Oryza sativa (japonica cultivar-group) dual positional specificity lipoxygenase mRNA, complete cds Length = 3154 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggtaagccc 193 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 2915 atggagatgctgttggggatgcccatggcggtgagccc 2878
>dbj|AK105792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H08, full insert sequence Length = 1560 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggtaagccc 193 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 1328 atggagatgctgttggggatgcccatggcggtgagccc 1291
>dbj|AK072869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O17, full insert sequence Length = 2851 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggtaagccc 193 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 2593 atggagatgctgttggggatgcccatggcggtgagccc 2556
>dbj|AK072689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H13, full insert sequence Length = 3167 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggtaagccc 193 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 2923 atggagatgctgttggggatgcccatggcggtgagccc 2886
>dbj|AK071121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079P11, full insert sequence Length = 1726 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggtaagccc 193 |||||||||||||||||||||||| ||||||| ||||| Sbjct: 1493 atggagatgctgttggggatgcccatggcggtgagccc 1456
>gb|U32428.1|TAU32428 Triticum aestivum lipoxygenase mRNA, partial cds Length = 1814 Score = 58.0 bits (29), Expect = 1e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggc 184 ||||||||||||||||||||||||||||| Sbjct: 1552 atggagatgctgttggggatgcccttggc 1524
>gb|AF271894.1|AF271894 Zea mays lipoxygenase (LOX) mRNA, complete cds Length = 2845 Score = 54.0 bits (27), Expect = 2e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 154 aaatggagatgctgttggggatgcccttggcggtaagcccggcagcggcgccctt 208 |||||||||||||||| || |||||||||||||| | ||||| ||| ||||||| Sbjct: 2620 aaatggagatgctgtttggaatgcccttggcggtgatgccggcggcgtcgccctt 2566
>gb|BT009097.1| Triticum aestivum clone wkm2c.pk005.n2:fis, full insert mRNA sequence Length = 1129 Score = 52.0 bits (26), Expect = 7e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggtaagccc 193 |||||||||||||||||||||||| |||| || ||||| Sbjct: 902 atggagatgctgttggggatgcccctggccgtgagccc 865
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 52.0 bits (26), Expect = 7e-04 Identities = 26/26 (100%) Strand = Plus / Minus Query: 154 aaatggagatgctgttggggatgccc 179 |||||||||||||||||||||||||| Sbjct: 22970458 aaatggagatgctgttggggatgccc 22970433
>gb|AY103567.1| Zea mays PCO116252 mRNA sequence Length = 3135 Score = 52.0 bits (26), Expect = 7e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggtaagccc 193 ||||||||||||||||| |||||| |||| |||||||| Sbjct: 2896 atggagatgctgttgggaatgcccatggcagtaagccc 2859
>gb|L37359.1|BLYLOXB Hordeum vulgare lipoxygenase (LoxB) mRNA, complete cds Length = 3003 Score = 52.0 bits (26), Expect = 7e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggtaagccc 193 ||||||| |||||||||||||||| ||||||| ||||| Sbjct: 2760 atggagacgctgttggggatgcccatggcggtgagccc 2723
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 52.0 bits (26), Expect = 7e-04 Identities = 26/26 (100%) Strand = Plus / Minus Query: 154 aaatggagatgctgttggggatgccc 179 |||||||||||||||||||||||||| Sbjct: 22898649 aaatggagatgctgttggggatgccc 22898624
>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155568 Score = 52.0 bits (26), Expect = 7e-04 Identities = 26/26 (100%) Strand = Plus / Minus Query: 154 aaatggagatgctgttggggatgccc 179 |||||||||||||||||||||||||| Sbjct: 79735 aaatggagatgctgttggggatgccc 79710
>gb|U56406.1|HVU56406 Hordeum vulgare methyljasmonate-inducible lipoxygenase 2 mRNA, complete cds Length = 3054 Score = 52.0 bits (26), Expect = 7e-04 Identities = 26/26 (100%) Strand = Plus / Minus Query: 154 aaatggagatgctgttggggatgccc 179 |||||||||||||||||||||||||| Sbjct: 2914 aaatggagatgctgttggggatgccc 2889
>emb|AJ507213.1|HVU507213 Hordeum vulgare mRNA for lipoxygenase 2 (lox2:Hv:3 gene) Length = 2967 Score = 50.1 bits (25), Expect = 0.003 Identities = 25/25 (100%) Strand = Plus / Minus Query: 154 aaatggagatgctgttggggatgcc 178 ||||||||||||||||||||||||| Sbjct: 2772 aaatggagatgctgttggggatgcc 2748
>gb|DQ428248.1| Sorghum propinquum locus PRC0271 genomic sequence Length = 810 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggt 187 |||||||||||||| || |||||||||||||| Sbjct: 792 atggagatgctgtttggaatgcccttggcggt 761
>gb|DQ428247.1| Sorghum bicolor voucher PI585454 locus PRC0271 genomic sequence Length = 805 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggt 187 |||||||||||||| || |||||||||||||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggt 756
>gb|DQ428246.1| Sorghum bicolor voucher PI267539 locus PRC0271 genomic sequence Length = 805 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggt 187 |||||||||||||| || |||||||||||||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggt 756
>gb|DQ428245.1| Sorghum bicolor voucher PI267408 locus PRC0271 genomic sequence Length = 805 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggt 187 |||||||||||||| || |||||||||||||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggt 756
>gb|DQ428244.1| Sorghum bicolor voucher PI221607 locus PRC0271 genomic sequence Length = 805 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggt 187 |||||||||||||| || |||||||||||||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggt 756
>gb|DQ428243.1| Sorghum bicolor voucher PI152702 locus PRC0271 genomic sequence Length = 805 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggt 187 |||||||||||||| || |||||||||||||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggt 756
>gb|DQ428242.1| Sorghum bicolor voucher NSL92371 locus PRC0271 genomic sequence Length = 805 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggt 187 |||||||||||||| || |||||||||||||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggt 756
>gb|DQ428241.1| Sorghum bicolor voucher NSL87902 locus PRC0271 genomic sequence Length = 805 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggt 187 |||||||||||||| || |||||||||||||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggt 756
>gb|DQ428240.1| Sorghum bicolor voucher NSL87666 locus PRC0271 genomic sequence Length = 805 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggt 187 |||||||||||||| || |||||||||||||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggt 756
>gb|DQ428239.1| Sorghum bicolor voucher NSL77217 locus PRC0271 genomic sequence Length = 805 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggt 187 |||||||||||||| || |||||||||||||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggt 756
>gb|DQ428238.1| Sorghum bicolor voucher NSL77034 locus PRC0271 genomic sequence Length = 805 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggt 187 |||||||||||||| || |||||||||||||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggt 756
>gb|DQ428237.1| Sorghum bicolor voucher NSL55243 locus PRC0271 genomic sequence Length = 805 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggt 187 |||||||||||||| || |||||||||||||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggt 756
>gb|DQ428236.1| Sorghum bicolor voucher NSL51365 locus PRC0271 genomic sequence Length = 805 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggt 187 |||||||||||||| || |||||||||||||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggt 756
>gb|DQ428235.1| Sorghum bicolor voucher NSL51030 locus PRC0271 genomic sequence Length = 805 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggt 187 |||||||||||||| || |||||||||||||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggt 756
>gb|DQ428234.1| Sorghum bicolor voucher BTx623 locus PRC0271 genomic sequence Length = 805 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggt 187 |||||||||||||| || |||||||||||||| Sbjct: 787 atggagatgctgtttggaatgcccttggcggt 756
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 48.1 bits (24), Expect = 0.011 Identities = 27/28 (96%) Strand = Plus / Plus Query: 154 aaatggagatgctgttggggatgccctt 181 |||||| ||||||||||||||||||||| Sbjct: 49249 aaatggtgatgctgttggggatgccctt 49276
>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18, complete sequence Length = 122159 Score = 48.1 bits (24), Expect = 0.011 Identities = 27/28 (96%) Strand = Plus / Plus Query: 154 aaatggagatgctgttggggatgccctt 181 |||||| ||||||||||||||||||||| Sbjct: 111408 aaatggtgatgctgttggggatgccctt 111435
>gb|AY111869.1| Zea mays CL452_-8 mRNA sequence Length = 568 Score = 44.1 bits (22), Expect = 0.18 Identities = 34/38 (89%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgcccttggcggtaagccc 193 ||||||||||||||||| |||||| |||| || ||||| Sbjct: 363 atggagatgctgttgggaatgcccatggcagtgagccc 326
>ref|XM_464447.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3123 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgccc 179 |||||||||||||| ||||||||| Sbjct: 2877 atggagatgctgtttgggatgccc 2854
>gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0093J03, complete sequence Length = 200626 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 gctgttggggatgcccttggcggt 187 ||||||||||||||||||| |||| Sbjct: 137475 gctgttggggatgcccttgccggt 137452
>emb|AL078613.10|HSA354I12 Human DNA sequence from clone RP11-354I12 on chromosome 22 Contains an STS and GSSs, complete sequence Length = 60837 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cacagacacacactacacca 86 |||||||||||||||||||| Sbjct: 58806 cacagacacacactacacca 58825
>emb|BX005216.10| Zebrafish DNA sequence from clone CH211-286O21, complete sequence Length = 163291 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 tgggaagcaaatctgctttattta 31 ||||||||||| |||||||||||| Sbjct: 113959 tgggaagcaaagctgctttattta 113982
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 gctgttggggatgcccttggcggt 187 ||||||||||||||||||| |||| Sbjct: 20830414 gctgttggggatgcccttgccggt 20830391
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 atggagatgctgttggggatgccc 179 |||||||||||||| ||||||||| Sbjct: 5276967 atggagatgctgtttgggatgccc 5276990
>dbj|AP004184.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1225_F07 Length = 142772 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 atggagatgctgttggggatgccc 179 |||||||||||||| ||||||||| Sbjct: 3270 atggagatgctgtttgggatgccc 3293
>dbj|AK073570.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046P13, full insert sequence Length = 3010 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 gctgttggggatgcccttggcggt 187 ||||||||||||||||||| |||| Sbjct: 2681 gctgttggggatgcccttgccggt 2658
>dbj|AK071915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074B03, full insert sequence Length = 3160 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgccc 179 |||||||||||||| ||||||||| Sbjct: 2876 atggagatgctgtttgggatgccc 2853
>gb|U76687.2|PVU76687 Phaseolus vulgaris lipoxygenase mRNA, complete cds Length = 3038 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 152 ttaaatggagatgctgttggggat 175 |||||| ||||||||||||||||| Sbjct: 2871 ttaaatagagatgctgttggggat 2848
>dbj|AK061610.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B01, full insert sequence Length = 2250 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgccc 179 |||||||||||||| ||||||||| Sbjct: 2038 atggagatgctgtttgggatgccc 2015
>gb|AY110522.1| Zea mays CL4677_2 mRNA sequence Length = 1304 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 atggagatgctgttggggatgccc 179 |||||||||||| ||||||||||| Sbjct: 138 atggagatgctgctggggatgccc 161
>gb|AY104322.1| Zea mays PCO093659 mRNA sequence Length = 1439 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 atggagatgctgttggggatgccc 179 |||||||||||| ||||||||||| Sbjct: 1210 atggagatgctgctggggatgccc 1187
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 gctgttggggatgcccttggcggt 187 ||||||||||||||||||| |||| Sbjct: 21140649 gctgttggggatgcccttgccggt 21140626
>emb|AL954813.14| Mouse DNA sequence from clone RP24-541E15 on chromosome 4, complete sequence Length = 140383 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cacagacacacactacacca 86 |||||||||||||||||||| Sbjct: 40251 cacagacacacactacacca 40232 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,211,722 Number of Sequences: 3902068 Number of extensions: 2211722 Number of successful extensions: 237245 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 70 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 236728 Number of HSP's gapped (non-prelim): 517 length of query: 218 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 196 effective length of database: 17,147,199,772 effective search space: 3360851155312 effective search space used: 3360851155312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)