>gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0027P09,
              complete sequence
          Length = 171861

 Score =  101 bits (51), Expect = 1e-18
 Identities = 81/91 (89%)
 Strand = Plus / Minus

                                                                          
Query: 249    taactcttctgtagaacagcacgtaagctgcacctgacttcacttcttcctcattgatgg 308
              ||||||||||||| || ||||| || ||||||||||| || || ||||| ||||||||||
Sbjct: 150420 taactcttctgtaaaagagcacataggctgcacctgattttacatcttcttcattgatgg 150361

                                             
Query: 309    cagaaacatgactatcatcaaaattgtacca 339
              |||||||||| |||||||||||||| |||||
Sbjct: 150360 cagaaacatggctatcatcaaaattatacca 150330

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  101 bits (51), Expect = 1e-18
 Identities = 81/91 (89%)
 Strand = Plus / Minus

                                                                            
Query: 249      taactcttctgtagaacagcacgtaagctgcacctgacttcacttcttcctcattgatgg 308
                ||||||||||||| || ||||| || ||||||||||| || || ||||| ||||||||||
Sbjct: 15740739 taactcttctgtaaaagagcacataggctgcacctgattttacatcttcttcattgatgg 15740680

                                               
Query: 309      cagaaacatgactatcatcaaaattgtacca 339
                |||||||||| |||||||||||||| |||||
Sbjct: 15740679 cagaaacatggctatcatcaaaattatacca 15740649

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  101 bits (51), Expect = 1e-18
 Identities = 81/91 (89%)
 Strand = Plus / Minus

                                                                            
Query: 249      taactcttctgtagaacagcacgtaagctgcacctgacttcacttcttcctcattgatgg 308
                ||||||||||||| || ||||| || ||||||||||| || || ||||| ||||||||||
Sbjct: 15828116 taactcttctgtaaaagagcacataggctgcacctgattttacatcttcttcattgatgg 15828057

                                               
Query: 309      cagaaacatgactatcatcaaaattgtacca 339
                |||||||||| |||||||||||||| |||||
Sbjct: 15828056 cagaaacatggctatcatcaaaattatacca 15828026

>emb|AL606589.3|OSJN00021 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0008A08,
             complete sequence
          Length = 130521

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 169   ctcagattatctttggctagatctgc 194
             |||||||||| |||||||||||||||
Sbjct: 73362 ctcagattatgtttggctagatctgc 73387

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 169      ctcagattatctttggctagatctgc 194
                |||||||||| |||||||||||||||
Sbjct: 15886797 ctcagattatgtttggctagatctgc 15886822

>ref|XM_866609.1| PREDICTED: Bos taurus similar to ubiquitin specific protease,
            proto-oncogene isoform a, transcript variant 3
            (LOC508042), mRNA
          Length = 4634

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 259  gtagaacagcacgtaagctgc 279
            |||||||||||||||||||||
Sbjct: 3384 gtagaacagcacgtaagctgc 3364

>ref|XM_584767.2| PREDICTED: Bos taurus similar to ubiquitin specific protease,
            proto-oncogene isoform a, transcript variant 1
            (LOC508042), mRNA
          Length = 2573

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 259  gtagaacagcacgtaagctgc 279
            |||||||||||||||||||||
Sbjct: 1323 gtagaacagcacgtaagctgc 1303

>gb|AY129336.1| Mycobacteriophage Che9d, complete genome
          Length = 56276

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   tgcttgctgctccatctgct 244
             ||||||||||||||||||||
Sbjct: 12404 tgcttgctgctccatctgct 12385

>gb|AC124413.2| Mus musculus BAC clone RP24-280K5 from chromosome 10, complete sequence
          Length = 178858

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 229    tgctgctccatctgcttctg 248
              ||||||||||||||||||||
Sbjct: 149175 tgctgctccatctgcttctg 149194

>ref|XM_844514.1| PREDICTED: Canis familiaris similar to G protein pathway suppressor
           2 (LOC607730), mRNA
          Length = 1084

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 232 tgctccatctgcttctgtaa 251
           ||||||||||||||||||||
Sbjct: 858 tgctccatctgcttctgtaa 839

>gb|AC115440.6| Rattus norvegicus 4 BAC CH230-183D1 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 143322

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   tcattgatggcagaaacatg 318
             ||||||||||||||||||||
Sbjct: 24211 tcattgatggcagaaacatg 24230

>gb|AC164653.3| Gallus gallus BAC clone CH261-187D17 from chromosome unknown, complete
             sequence
          Length = 224272

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 278   gcacctgacttcacttcttc 297
             ||||||||||||||||||||
Sbjct: 59431 gcacctgacttcacttcttc 59450

>emb|CR352917.1| Gallus gallus finished cDNA, clone ChEST402f19
          Length = 794

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 219 ttccattgcttgctgctcca 238
           ||||||||||||||||||||
Sbjct: 501 ttccattgcttgctgctcca 482

>dbj|AP004373.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-652L13, complete
            sequences
          Length = 96727

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 201  gtttcacacatgactgggtt 220
            ||||||||||||||||||||
Sbjct: 5216 gtttcacacatgactgggtt 5235


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,975,080
Number of Sequences: 3902068
Number of extensions: 2975080
Number of successful extensions: 61574
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61500
Number of HSP's gapped (non-prelim): 74
length of query: 347
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 325
effective length of database: 17,147,199,772
effective search space: 5572839925900
effective search space used: 5572839925900
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)