Clone Name | rbastl06g02 |
---|---|
Clone Library Name | barley_pub |
>emb|BX511153.9| Zebrafish DNA sequence from clone DKEYP-66D1 in linkage group 2, complete sequence Length = 146969 Score = 42.1 bits (21), Expect = 0.76 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 aaattttttacaagaatattc 26 ||||||||||||||||||||| Sbjct: 120049 aaattttttacaagaatattc 120069 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 aattttttacaagaatattc 104 |||||||||||||||||||| Sbjct: 120050 aattttttacaagaatattc 120069
>gb|AC186369.1| Pan troglodytes chromosome UNKNOWN clone CH251-21L17, complete sequence Length = 204239 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 aagaatgcaaatgacactggatga 160 |||||||||||||| ||||||||| Sbjct: 189883 aagaatgcaaatgaaactggatga 189906
>ref|XM_807371.1| Trypanosoma cruzi strain CL Brener kinesin (Tc00.1047053511293.60) partial mRNA Length = 5001 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 gcaaatgacactggatgagg 162 |||||||||||||||||||| Sbjct: 969 gcaaatgacactggatgagg 988
>ref|XM_811844.1| Trypanosoma cruzi strain CL Brener kinesin (Tc00.1047053506503.80) partial mRNA Length = 5010 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 gcaaatgacactggatgagg 162 |||||||||||||||||||| Sbjct: 969 gcaaatgacactggatgagg 988
>emb|AL663071.5| Mouse DNA sequence from clone RP23-446K7 on chromosome 11, complete sequence Length = 205845 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 acattctagcaggaatgcaaaata 72 |||||| ||||||||||||||||| Sbjct: 89218 acattcaagcaggaatgcaaaata 89195
>gb|AC160055.2| Pan troglodytes BAC clone CH251-555N15 from chromosome unknown, complete sequence Length = 227737 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 137 aagaatgcaaatgacactggatga 160 |||||||||||||| ||||||||| Sbjct: 91014 aagaatgcaaatgaaactggatga 90991
>gb|AC011418.5| Homo sapiens chromosome 5 clone CTB-9P16, complete sequence Length = 108511 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ataaaattttttacaagaat 22 |||||||||||||||||||| Sbjct: 61272 ataaaattttttacaagaat 61291
>gb|AC007707.14| Homo sapiens chromosome 11 clone rp11-442e11 map 11q23, complete sequence Length = 188963 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 aagaatgcaaatgacactggatga 160 |||||||||||||| ||||||||| Sbjct: 183310 aagaatgcaaatgaaactggatga 183333
>gb|AC026413.5|AC026413 Homo sapiens chromosome 5 clone CTD-2030B15, complete sequence Length = 117928 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 ttctagcaggaatgcaaaat 71 |||||||||||||||||||| Sbjct: 100012 ttctagcaggaatgcaaaat 100031
>gb|AC163767.4| Pan troglodytes BAC clone CH251-162B13 from chromosome unknown, complete sequence Length = 193117 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 aagaatgcaaatgacactggatga 160 |||||||||||||| ||||||||| Sbjct: 54298 aagaatgcaaatgaaactggatga 54321
>dbj|AP003070.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-4N9, complete sequence Length = 163905 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 aagaatgcaaatgacactggatga 160 |||||||||||||| ||||||||| Sbjct: 69145 aagaatgcaaatgaaactggatga 69168 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,544,239 Number of Sequences: 3902068 Number of extensions: 2544239 Number of successful extensions: 48340 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 48312 Number of HSP's gapped (non-prelim): 28 length of query: 235 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 213 effective length of database: 17,147,199,772 effective search space: 3652353551436 effective search space used: 3652353551436 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)