ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl06g01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ATG7_CRYNE (Q5KC57) Autophagy-related protein 7 (Autophagy-relat... 72 6e-13
2ATG7_PICPA (O93922) Autophagy-related protein 7 (Autophagy-relat... 65 1e-10
3ATG7_CANGA (Q6FQY7) Autophagy-related protein 7 (Autophagy-relat... 63 3e-10
4ATG7_SCHPO (O43069) Autophagy-related protein 7 (Autophagy-relat... 63 4e-10
5ATG7_MAGGR (Q52CS0) Autophagy-related protein 7 (Autophagy-relat... 62 7e-10
6ATG7_HUMAN (O95352) Autophagy-related protein 7 (APG7-like) (Ubi... 61 1e-09
7ATG7_RAT (Q641Y5) Autophagy-related protein 7 (APG7-like) (Ubiqu... 61 1e-09
8ATG7_CHICK (Q5ZKY2) Autophagy-related protein 7 (APG7-like) (Ubi... 60 2e-09
9ATG7_CANAL (Q59PZ3) Autophagy-related protein 7 (Autophagy-relat... 60 3e-09
10ATG7_MOUSE (Q9D906) Autophagy-related protein 7 (APG7-like) (Ubi... 59 4e-09
11ATG7_NEUCR (Q871U2) Autophagy-related protein 7 (Autophagy-relat... 58 9e-09
12ATG7_DEBHA (Q6BGV9) Autophagy-related protein 7 (Autophagy-relat... 53 3e-07
13ATG7_YARLI (Q6CBC3) Autophagy-related protein 7 (Autophagy-relat... 52 5e-07
14ATG7_YEAST (P38862) Autophagy-related protein 7 (Autophagy-relat... 50 3e-06
15ATG7_ASHGO (Q756G8) Autophagy-related protein 7 (Autophagy-relat... 49 4e-06
16ATG7_KLULA (Q6CXW3) Autophagy-related protein 7 (Autophagy-relat... 40 0.002
17PAP3_ORYSA (Q7XBW5) Probable plastid-lipid associated protein 3,... 34 0.19
18STE16_SCHPO (Q09743) Protein ste16 33 0.33
19HMDH_ASPTE (Q9Y7D2) 3-hydroxy-3-methylglutaryl-coenzyme A reduct... 31 1.2
20ENV_MLVFF (P26804) Env polyprotein precursor [Contains: Coat pro... 30 2.1
215HT2A_DROME (P28285) 5-hydroxytryptamine receptor 2A (5-HT recep... 30 2.8
22COBB_SULAC (Q4JAI7) Probable cobyrinic acid A,C-diamide synthase 29 6.2
23PUR7_BACTN (Q8A004) Phosphoribosylaminoimidazole-succinocarboxam... 29 6.2
24MRJP2_APIME (O77061) Major royal jelly protein 2 precursor (MRJP... 28 8.1
25GGH_SOYBN (P93164) Gamma-glutamyl hydrolase precursor (EC 3.4.19... 28 8.1

>ATG7_CRYNE (Q5KC57) Autophagy-related protein 7 (Autophagy-related|
           E1-like-activating enzyme ATG7)
          Length = 675

 Score = 72.0 bits (175), Expect = 6e-13
 Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
 Frame = -3

Query: 449 VNHPDGIHAPGDIADT------NSEGPSGLLPHQIRESVSQYNLLTLMGYSSSSCIACSN 288
           + HP G+HAP +  DT          P G +PHQ+R  + Q+    + G +   C  CS+
Sbjct: 561 LQHPLGVHAPAERPDTAETSTSTKTSPLGCVPHQLRGQMYQWKTQIVEGEAFDRCTGCSD 620

Query: 287 AVVREYRSRGLDFVMQVINEPTYLEDLTGLTELMKSAD 174
            V+ EY + G  F+ +V NE  YLE +TGL EL + ++
Sbjct: 621 YVLNEYETNGFAFLRRVFNEKDYLEKVTGLDELYRESE 658



to top

>ATG7_PICPA (O93922) Autophagy-related protein 7 (Autophagy-related|
           E1-like-activating enzyme ATG7) (Glucose-induced
           selective autophagy protein 7) (Pexophagy
           zeocin-resistant mutant protein 12)
          Length = 654

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 35/92 (38%), Positives = 50/92 (54%)
 Frame = -3

Query: 449 VNHPDGIHAPGDIADTNSEGPSGLLPHQIRESVSQYNLLTLMGYSSSSCIACSNAVVREY 270
           + HP   HAP  + D  +    G LP Q+R  +  +    L   +   C ACS  V+ EY
Sbjct: 541 LQHPLKSHAPASLHDNATV--LGCLPQQLRGFLHNFETSKLEANNYEYCSACSIQVLNEY 598

Query: 269 RSRGLDFVMQVINEPTYLEDLTGLTELMKSAD 174
           +SR  DFV   +NE  YLEDLTGLT++ + ++
Sbjct: 599 KSRTWDFVKDALNENNYLEDLTGLTKVKQESE 630



to top

>ATG7_CANGA (Q6FQY7) Autophagy-related protein 7 (Autophagy-related|
           E1-like-activating enzyme ATG7)
          Length = 623

 Score = 63.2 bits (152), Expect = 3e-10
 Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
 Frame = -3

Query: 413 IADTNSEGPSGLL---PHQIRESVSQYNLLTLMGYSSSSCIACSNAVVREYRSRGLDFVM 243
           +++  S G   +L   PHQIR  V+ +  L L   +  +C ACS  ++ EY  RG DFV 
Sbjct: 519 VSNLQSRGQENVLGECPHQIRGFVNNFTTLKLQSPAYDNCSACSRHILNEYNKRGWDFVK 578

Query: 242 QVINEPTYLEDLTGLTELMKSADYSRVE 159
           Q +N+  Y+E+L+GL  + +  +   +E
Sbjct: 579 QALNDNNYIEELSGLRRIKEEVENMELE 606



to top

>ATG7_SCHPO (O43069) Autophagy-related protein 7 (Autophagy-related|
           E1-like-activating enzyme atg7)
          Length = 649

 Score = 62.8 bits (151), Expect = 4e-10
 Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
 Frame = -3

Query: 449 VNHPDGIHAPGDIADTNSEGPSGLLPHQIRESVSQYNLLTLMGYSSSSCIACSNAVVREY 270
           + HP+G  AP        +   G LPHQIR  +  ++L+ + G +   C ACS  ++ E+
Sbjct: 544 LQHPNGHAAP---VLNEDQTVLGELPHQIRGFLHNFSLMKISGMAYPQCSACSECIINEW 600

Query: 269 RSRGLDFVMQVINEPTYLEDLTGLTELMKSADYSRV--EWV 153
                 FV++ INEP Y+E+L GL E+    + +    EW+
Sbjct: 601 NREKWMFVLRAINEPDYVEELCGLREVQALGEIAGTMEEWI 641



to top

>ATG7_MAGGR (Q52CS0) Autophagy-related protein 7 (Autophagy-related|
           E1-like-activating enzyme ATG7)
          Length = 718

 Score = 62.0 bits (149), Expect = 7e-10
 Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
 Frame = -3

Query: 449 VNHPDGIHAPGDIADTNSEGPS----------GLLPHQIRESVSQYNLLTLMGYSSSSCI 300
           + HP   HAP   A      P           G++PHQ+R  ++ +  + + G S  +C 
Sbjct: 592 LQHPQREHAPAPKATGPPGNPEYQRDPPDHALGIVPHQVRGFLANFQNMIISGESYPNCS 651

Query: 299 ACSNAVVREYRSRGLDFVMQVINEPTYLEDLTGLTELMKSAD--YSRVEW 156
           ACS+ +V  Y+S G +FV + +++  Y+ +L+GL E+ + A+   + V+W
Sbjct: 652 ACSSPIVGAYKSDGWEFVKKALSDKDYVLELSGLAEVQRQAEAMQNEVDW 701



to top

>ATG7_HUMAN (O95352) Autophagy-related protein 7 (APG7-like)|
           (Ubiquitin-activating enzyme E1-like protein) (hAGP7)
          Length = 703

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
 Frame = -3

Query: 449 VNHPDGIHAPGDIADTNSEGPS---GLLPHQIRESVSQYNLLTLMGYSSSSCIACSNAVV 279
           + HP+G +A    +D     P    GL+PHQIR  +S+++ +  +  +   C ACS+ V+
Sbjct: 595 LQHPEGGYAIASSSDDRMNEPPTSLGLVPHQIRGFLSRFDNVLPVSLAFDKCTACSSKVL 654

Query: 278 REYRSRGLDFVMQVINEP-TYLEDLTGLTELMKSADYSRV 162
            +Y   G +F+ +V N   ++LEDLTGLT L +    + +
Sbjct: 655 DQYEREGFNFLAKVFNSSHSFLEDLTGLTLLHQETQAAEI 694



to top

>ATG7_RAT (Q641Y5) Autophagy-related protein 7 (APG7-like)|
           (Ubiquitin-activating enzyme E1-like protein)
          Length = 698

 Score = 60.8 bits (146), Expect = 1e-09
 Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
 Frame = -3

Query: 449 VNHPDGIHAPGDIADTNSEGPS---GLLPHQIRESVSQYNLLTLMGYSSSSCIACSNAVV 279
           + HP+G +A    +D     P    GL+PHQIR  +S+++ +  +  +   C ACS+ V+
Sbjct: 590 LQHPEGGYAIASSSDDRMNEPPTSLGLVPHQIRGFLSRFDNVLPVSLAFDKCTACSSKVL 649

Query: 278 REYRSRGLDFVMQVINEP-TYLEDLTGLTELMKSADYSRV 162
            +Y   G  F+ +V N   ++LEDLTGLT L +    + +
Sbjct: 650 DQYEQEGFTFLAKVFNSSHSFLEDLTGLTLLHQETQAAEI 689



to top

>ATG7_CHICK (Q5ZKY2) Autophagy-related protein 7 (APG7-like)|
           (Ubiquitin-activating enzyme E1-like protein)
          Length = 709

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
 Frame = -3

Query: 449 VNHPDGIHAPGDIADTNSEGPS---GLLPHQIRESVSQYNLLTLMGYSSSSCIACSNAVV 279
           + HP+G +A    +D     P    GL+PHQIR  +S+++ +  +  +   C ACS  V+
Sbjct: 601 LQHPEGGYAVASSSDDRMNEPPTSLGLVPHQIRGFLSRFDNVLPVSLAFDKCTACSPKVL 660

Query: 278 REYRSRGLDFVMQVINEP-TYLEDLTGLTELMKSADYSRV 162
            +Y   G +F+ +V N   ++LEDLTGLT L +    + +
Sbjct: 661 DQYEREGFNFLAKVFNSSHSFLEDLTGLTLLHQETQAAEI 700



to top

>ATG7_CANAL (Q59PZ3) Autophagy-related protein 7 (Autophagy-related|
           E1-like-activating enzyme ATG7)
          Length = 639

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 28/85 (32%), Positives = 49/85 (57%)
 Frame = -3

Query: 428 HAPGDIADTNSEGPSGLLPHQIRESVSQYNLLTLMGYSSSSCIACSNAVVREYRSRGLDF 249
           H   ++A  ++E   G +PHQIR  +  +    L   S   C ACS  V+ E++  G +F
Sbjct: 527 HPERNLAPHDAETKFGNIPHQIRGFLHNFQQTKLFAPSYVHCSACSPRVITEFKQEGWEF 586

Query: 248 VMQVINEPTYLEDLTGLTELMKSAD 174
           V + +++  YLED++GLT++ + A+
Sbjct: 587 VRKCLDDSQYLEDISGLTKVQQEAE 611



to top

>ATG7_MOUSE (Q9D906) Autophagy-related protein 7 (APG7-like)|
           (Ubiquitin-activating enzyme E1-like protein) (mAGP7)
          Length = 698

 Score = 59.3 bits (142), Expect = 4e-09
 Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
 Frame = -3

Query: 449 VNHPDGIHAPGDIADTNSEGPS---GLLPHQIRESVSQYNLLTLMGYSSSSCIACSNAVV 279
           + HP+G +A    +D     P    GL+PHQIR  +S+++ +  +  +   C ACS  V+
Sbjct: 590 LQHPEGGYAIASSSDDRMNEPPTSLGLVPHQIRGFLSRFDNVLPVSLAFDKCTACSPKVL 649

Query: 278 REYRSRGLDFVMQVINEP-TYLEDLTGLTELMKSADYSRV 162
            +Y   G  F+ +V N   ++LEDLTGLT L +    + +
Sbjct: 650 DQYEREGFTFLAKVFNSSHSFLEDLTGLTLLHQETQAAEI 689



to top

>ATG7_NEUCR (Q871U2) Autophagy-related protein 7 (Autophagy-related|
           E1-like-activating enzyme atg-7)
          Length = 699

 Score = 58.2 bits (139), Expect = 9e-09
 Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
 Frame = -3

Query: 449 VNHPDGIHAPGDIADTNSEG----------PSGLLPHQIRESVSQYNLLTLMGYSSSSCI 300
           + HP   HAP  ++                P GL+PHQ+R  +S +  + + G S   C 
Sbjct: 573 LQHPLKQHAPAPVSTGTGSAVSYERDPPDHPLGLVPHQVRGFLSNFQNMVIRGKSYPQCS 632

Query: 299 ACSNAVVREYRSRGLDFVMQVINEPTYLEDLTGLTELMKSADYSRVE 159
           ACS  ++  Y+  G +FV   +    Y+ +L+GL E+ + A+ +  E
Sbjct: 633 ACSKPILDAYKEGGWEFVKTALASRDYVAELSGLAEVQRLAEKAAAE 679



to top

>ATG7_DEBHA (Q6BGV9) Autophagy-related protein 7 (Autophagy-related|
           E1-like-activating enzyme ATG7)
          Length = 652

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
 Frame = -3

Query: 392 GPS-----GLLPHQIRESVSQYNLLTLMGYSSSSCIACSNAVVREYRSRGLDFVMQVINE 228
           GPS     G +PHQIR  +  Y+   L   +   C ACS  V+ ++   G +FV   +N+
Sbjct: 553 GPSNNLILGEVPHQIRGFLHNYSQSKLQTPNYKHCSACSKYVIDKFNELGWEFVKNCLND 612

Query: 227 PTYLEDLTGLTELMKSADYSRVE 159
            TYLE+  GL ++ + AD +  E
Sbjct: 613 VTYLEETCGLLKVQQEADLASSE 635



to top

>ATG7_YARLI (Q6CBC3) Autophagy-related protein 7 (Autophagy-related|
           E1-like-activating enzyme ATG7)
          Length = 598

 Score = 52.4 bits (124), Expect = 5e-07
 Identities = 22/67 (32%), Positives = 39/67 (58%)
 Frame = -3

Query: 374 PHQIRESVSQYNLLTLMGYSSSSCIACSNAVVREYRSRGLDFVMQVINEPTYLEDLTGLT 195
           PHQ+R  +  ++ + + G     C ACS  +V+E++ +   FV + +NE  ++E+L GL 
Sbjct: 516 PHQLRGFLHNFSTVKITGQRFKCCSACSPVIVQEWKDKTWGFVKKALNERGFVEELCGLA 575

Query: 194 ELMKSAD 174
           EL +  D
Sbjct: 576 ELQRGVD 582



to top

>ATG7_YEAST (P38862) Autophagy-related protein 7 (Autophagy-related|
           E1-like-activating enzyme ATG7) (Cytoplasm to vacuole
           targeting protein 2) (ATG12 activating E2-like enzyme)
          Length = 630

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 22/70 (31%), Positives = 40/70 (57%)
 Frame = -3

Query: 383 GLLPHQIRESVSQYNLLTLMGYSSSSCIACSNAVVREYRSRGLDFVMQVINEPTYLEDLT 204
           G +PHQIR  +  +++L L   +   C ACS  V+  +   G +FV + +  P YLE+++
Sbjct: 543 GDIPHQIRGFLHNFSILKLETPAYEHCPACSPKVIEAFTDLGWEFVKKALEHPLYLEEIS 602

Query: 203 GLTELMKSAD 174
           GL+ + +  +
Sbjct: 603 GLSVIKQEVE 612



to top

>ATG7_ASHGO (Q756G8) Autophagy-related protein 7 (Autophagy-related|
           E1-like-activating enzyme ATG7)
          Length = 625

 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 26/92 (28%), Positives = 47/92 (51%)
 Frame = -3

Query: 449 VNHPDGIHAPGDIADTNSEGPSGLLPHQIRESVSQYNLLTLMGYSSSSCIACSNAVVREY 270
           + HP G +AP       SE   G +PHQ+R  + Q + + L   +   C ACS+ +V   
Sbjct: 521 LQHPQGNNAP-----ETSESVLGSVPHQLRGFLPQLSTVKLRTPAYKHCSACSSVIVDAV 575

Query: 269 RSRGLDFVMQVINEPTYLEDLTGLTELMKSAD 174
           R  G +F+ + + +   +E L+GL ++ +  +
Sbjct: 576 RENGWEFLREALVDHRIVERLSGLAQVQQETE 607



to top

>ATG7_KLULA (Q6CXW3) Autophagy-related protein 7 (Autophagy-related|
           E1-like-activating enzyme ATG7)
          Length = 603

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 19/70 (27%), Positives = 39/70 (55%)
 Frame = -3

Query: 383 GLLPHQIRESVSQYNLLTLMGYSSSSCIACSNAVVREYRSRGLDFVMQVINEPTYLEDLT 204
           G  PHQIR  ++++  + L   +   C A +  V+   +  G +FV Q +++   +E L+
Sbjct: 516 GSAPHQIRGFLNEFKTVKLETPAYQHCCASNENVILTLKENGWNFVKQALDDYKCVEQLS 575

Query: 203 GLTELMKSAD 174
           GL+++ + A+
Sbjct: 576 GLSKVQEEAE 585



to top

>PAP3_ORYSA (Q7XBW5) Probable plastid-lipid associated protein 3, chloroplast|
           precursor
          Length = 374

 Score = 33.9 bits (76), Expect = 0.19
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +2

Query: 128 TPRRRQLHLPTRLENNPPISSTRSDPSGLPDRWVH*SPASQNP 256
           T  RR   LP R    PP+++  +  SG+PD W   SP++  P
Sbjct: 27  TGSRRPFRLPLRSSRRPPVAAAAA--SGVPDEWGDRSPSAPEP 67



to top

>STE16_SCHPO (Q09743) Protein ste16|
          Length = 1309

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 19/58 (32%), Positives = 30/58 (51%)
 Frame = -3

Query: 368  QIRESVSQYNLLTLMGYSSSSCIACSNAVVREYRSRGLDFVMQVINEPTYLEDLTGLT 195
            +I ES+  Y+L++LMG S   CI      V     R ++FV + +  P +   L+ LT
Sbjct: 1157 EILESLHWYSLMSLMGTSQGICIPRHAGQVLSTPRRNVEFVNERVPTPEFSSLLSSLT 1214



to top

>HMDH_ASPTE (Q9Y7D2) 3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC|
           1.1.1.34) (HMG-CoA reductase)
          Length = 1068

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 12/39 (30%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
 Frame = -3

Query: 431 IHAPGDIADTNSEGPSGLLPHQIRE-SVSQYNLLTLMGY 318
           I +PG +   N++ PSG+  H+++  +++ + LLT+ G+
Sbjct: 384 IRSPGGLGQVNAKHPSGIFGHKVKSTNITWWKLLTVGGF 422



to top

>ENV_MLVFF (P26804) Env polyprotein precursor [Contains: Coat protein GP70;|
           Spike protein p15E; R protein]
          Length = 676

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 11/67 (16%)
 Frame = +2

Query: 269 CIHAL---PHWNMRYSCSRNSPSGLISCTAILILVSGVAIDQTDP--------HCSCQRY 415
           C+ AL   PHW + Y    +SP G   C+     V+G A D  +P        + +  R 
Sbjct: 80  CMLALSGPPHWGLEYQAPYSSPPGPPCCSGSSGNVAGCARDCNEPLTSLTPRCNTAWNRL 139

Query: 416 PLEHVSH 436
            L+ V+H
Sbjct: 140 KLDQVTH 146



to top

>5HT2A_DROME (P28285) 5-hydroxytryptamine receptor 2A (5-HT receptor) (Serotonin|
           receptor 2A)
          Length = 834

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +2

Query: 80  VIFTLFWSIYKVTCRQTPRRRQLHLPTRLENNPPISSTRSD 202
           VI  L+W IY+   ++  RRR   +   + NN P     +D
Sbjct: 401 VILALYWKIYQTARKRIHRRRPRPVDAAVNNNQPDGGAATD 441



to top

>COBB_SULAC (Q4JAI7) Probable cobyrinic acid A,C-diamide synthase|
          Length = 434

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = +3

Query: 111 KSHVGKLLVVVSFIYPLDSRIIRRFHQLGQTRQVFQIGGFIDHLHHKIQSSTPV 272
           +S+ GK LV    I  L  R   R +++G          FID ++HKI S  PV
Sbjct: 12  RSNSGKTLVTAGLIKVLSKRYKVRGYKVGPD--------FIDPMYHKIASGHPV 57



to top

>PUR7_BACTN (Q8A004) Phosphoribosylaminoimidazole-succinocarboxamide synthase|
           (EC 6.3.2.6) (SAICAR synthetase)
          Length = 314

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -2

Query: 384 WSIATPDTRISIAVQLINPDGLFLEQLYRMFQCGSA 277
           W +ATPD  +++ V     +G  +E + R + CGSA
Sbjct: 77  WKMATPDPMVTVGVLC---EGFPVEMIVRGYLCGSA 109



to top

>MRJP2_APIME (O77061) Major royal jelly protein 2 precursor (MRJP-2) (Bee-milk|
           protein)
          Length = 452

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = -3

Query: 302 IACSNAVVREYRSRGLDFVMQVINEPTYLEDLTGLTELMKSA 177
           IAC  A+VRE   R L+  + VI+E  Y +   G  E  ++A
Sbjct: 13  IACQGAIVRENSPRNLEKSLNVIHEWKYFDYDFGSEERRQAA 54



to top

>GGH_SOYBN (P93164) Gamma-glutamyl hydrolase precursor (EC 3.4.19.9)|
           (Gamma-Glu-X carboxypeptidase) (Conjugase) (GH)
          Length = 342

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +2

Query: 74  NEVIFTLFWSIYKVTC--RQTPRRRQLHLPTRLENNPPISSTRSDPS 208
           N+ + +LF+ +   TC    T     + LP++L ++  +S T +DPS
Sbjct: 3   NDSVLSLFFFVTLFTCLLSATSHDDHIFLPSQLHDDDSVSCTATDPS 49


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,174,837
Number of Sequences: 219361
Number of extensions: 1312126
Number of successful extensions: 3574
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3569
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top