ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl06f05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1E118_ADET1 (P06439) Early E1A 18 kDa protein 28 6.2

>E118_ADET1 (P06439) Early E1A 18 kDa protein|
          Length = 162

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 199 NKRGEGFIFPKCRRSPGAVC 140
           N+  EGF+FP C   PG  C
Sbjct: 76  NEEVEGFVFPDCPERPGQEC 95


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,646,890
Number of Sequences: 219361
Number of extensions: 619963
Number of successful extensions: 1165
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 80,573,946
effective HSP length: 61
effective length of database: 67,192,925
effective search space used: 1612630200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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