>gb|AC023484.5| Homo sapiens chromosome 3 clone RP11-454F24 map 3p, complete sequence
          Length = 192875

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 70     aacatttacactggtgttaaggcatcagg 98
              ||||||||||||||||| ||||| |||||
Sbjct: 145033 aacatttacactggtgtaaaggcgtcagg 145005

>gb|AC024167.6| Homo sapiens chromosome 3 clone RP11-453F3 map 3p, complete sequence
          Length = 188719

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 70    aacatttacactggtgttaaggcatcagg 98
             ||||||||||||||||| ||||| |||||
Sbjct: 77265 aacatttacactggtgtaaaggcgtcagg 77237

>gb|AC016146.18| Homo sapiens 3 BAC RP11-327M20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 190456

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 70    aacatttacactggtgttaaggcatcagg 98
             ||||||||||||||||| ||||| |||||
Sbjct: 13548 aacatttacactggtgtaaaggcgtcagg 13520

>gb|U93852.1|ECU93852 Euplotes crassus histone H2B (H2B(1)) gene, complete cds
          Length = 1518

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 18 ttacactagtgtaaataaatc 38
          |||||||||||||||||||||
Sbjct: 78 ttacactagtgtaaataaatc 98

>ref|XM_632195.1| Dictyostelium discoideum hypothetical protein (DDB0187467), partial
           mRNA
          Length = 2013

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 aaacaaagctcatcacaagt 248
           ||||||||||||||||||||
Sbjct: 79  aaacaaagctcatcacaagt 98

>gb|AC121579.3| Mus musculus BAC clone RP23-255H8 from 3, complete sequence
          Length = 184377

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 75    ttacactggtgttaaggcatcagg 98
             ||||||||||||| ||||||||||
Sbjct: 15675 ttacactggtgtttaggcatcagg 15652

>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
          Length = 2575032

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 32      ataaatctacaattgacaaa 51
               ||||||||||||||||||||
Sbjct: 1925025 ataaatctacaattgacaaa 1925044

>gb|AY170317.1| Porcine lymphotropic herpesvirus 2 isolate 568 long unique region,
             partial sequence
          Length = 59673

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    caacagctttaacatttaca 79
             ||||||||||||||||||||
Sbjct: 53522 caacagctttaacatttaca 53503

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 219     acatcaggctaaacaaagct 238
               ||||||||||||||||||||
Sbjct: 9771574 acatcaggctaaacaaagct 9771555

>dbj|AP005095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1063H10
          Length = 170453

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   acatcaggctaaacaaagct 238
             ||||||||||||||||||||
Sbjct: 35506 acatcaggctaaacaaagct 35487

>emb|BX005362.6| Zebrafish DNA sequence from clone CH211-159C12 in linkage group 22,
             complete sequence
          Length = 178151

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    tgtaaataaatctacaattg 46
             ||||||||||||||||||||
Sbjct: 29497 tgtaaataaatctacaattg 29516

>gb|AC135635.5| Mus musculus BAC clone RP23-245M20 from 3, complete sequence
          Length = 192485

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 75     ttacactggtgttaaggcatcagg 98
              ||||||||||||| ||||||||||
Sbjct: 144175 ttacactggtgtttaggcatcagg 144152


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,941,390
Number of Sequences: 3902068
Number of extensions: 2941390
Number of successful extensions: 62370
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62326
Number of HSP's gapped (non-prelim): 44
length of query: 259
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 237
effective length of database: 17,147,199,772
effective search space: 4063886345964
effective search space used: 4063886345964
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)