>GLMS_TREPA (O83833) Glucosamine--fructose-6-phosphate aminotransferase|
           [isomerizing] (EC 2.6.1.16) (Hexosephosphate
           aminotransferase) (D-fructose-6-phosphate
           amidotransferase) (GFAT)
           (L-glutamine-D-fructose-6-phosphate amidotransferase)
           (Glucosamine-6-ph
          Length = 634

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -1

Query: 256 CN*LQSCLVARMDRHATCTHSGGHVGVELVVSFDLKLICICI 131
           CN  +S LV   D     TH+G  +GV    SF  +L+C+ +
Sbjct: 387 CNGARSTLVRESDA-VLLTHAGSEIGVASTKSFTTQLVCLLV 427

>MURE_LISMO (Q8Y5L9) UDP-N-acetylmuramoylalanyl-D-glutamate--2,|
           6-diaminopimelate ligase (EC 6.3.2.13)
           (UDP-N-acetylmuramyl-tripeptide synthetase)
           (Meso-diaminopimelate-adding enzyme)
           (UDP-MurNAc-tripeptide synthetase)
          Length = 491

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
 Frame = +2

Query: 113 NFQYTLDTYTNKLKVKRHHQFNSYMSTRVGTSGMPVHSGNQTRLQLVTA---LVDGIKMF 283
           ++ +T++ Y N   +      NSY ++    + +        R+Q  TA   +  GIK  
Sbjct: 205 DYHHTMEEYANAKSLLFAQLGNSYHTSNPKIAVLNADDAESVRMQKATAAHIITFGIKQE 264

Query: 284 LDEPPANAEV*EHSEGSSVTT---TFTSEHAMLGN 379
            D   +N ++  H     + T    FT +  M+GN
Sbjct: 265 ADFQASNIKITSHGSTFDLGTPVGNFTLKIKMIGN 299

>PHSA_SALTY (P37600) Thiosulfate reductase precursor (EC 1.-.-.-)|
          Length = 758

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 99  SSKDVTFSTHLIHIQISLRSKDTTSSTPTCP 191
           SSK  + S+HL H+  +  S +T +   TCP
Sbjct: 145 SSKSGSLSSHLFHLATAFGSPNTFTHASTCP 175

>TAF1C_HUMAN (Q15572) TATA box-binding protein-associated factor RNA polymerase|
           I subunit C (TATA box-binding protein-associated factor
           1C) (TBP-associated factor 1C) (TBP-associated factor
           RNA polymerase I 110 kDa) (TAFI110)
          Length = 869

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +2

Query: 290 EPPANAEV*EHSEGSSVTTTFTSEHAMLGNSKTCIRSKPR 409
           + P  A    HS+ SSV  T + +H  + +S   +R KPR
Sbjct: 827 DTPGCATTPPHSQASSVRATRSQQHTPVLSSSQPLRKKPR 866


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,179,077
Number of Sequences: 219361
Number of extensions: 1397715
Number of successful extensions: 3460
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3460
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)