>NOTCH_XENLA (P21783) Neurogenic locus notch protein homolog precursor (XOTCH|
            protein)
          Length = 2524

 Score = 32.0 bits (71), Expect = 0.39
 Identities = 22/80 (27%), Positives = 32/80 (40%)
 Frame = +3

Query: 24   TDTTKYHYTRSSDPITKFHCHRPPGCMTSINVHDTVVFWAQTVCLGGTSQRSFASTLTTA 203
            T+++ ++     D I  F C  PPG   S   HD     ++    GGT Q S+ +   T 
Sbjct: 987  TESSCFNGGTCIDGINTFTCQCPPGFTGSYCQHDINECDSKPCLNGGTCQDSYGTYKCTC 1046

Query: 204  TSKYTII*CDKTSAEASHSP 263
               YT + C         SP
Sbjct: 1047 PQGYTGLNCQNLVRWCDSSP 1066

>Y2191_MYCTU (Q10384) Hypothetical protein Rv2191/MT2247|
          Length = 645

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
 Frame = -1

Query: 263 RGVRSFR-RSFVALYNGILASCSCQCRSKRTLTRAAKANGLCPEDHSIMDIDACHATRWA 87
           R V  FR RS  A    +LA C+        LTR+A+    CPE    +++ AC A R  
Sbjct: 357 RVVGPFRSRSKAAETAALLARCTGLRTCTTRLTRSARHGPACPE----LEVSACPAARDV 412

Query: 86  MAMEFGDWIRAPCVVI 39
            A ++ + +     +I
Sbjct: 413 TAAQYAEAVLRAAALI 428

>GAOX2_ARATH (Q39111) Gibberellin 20 oxidase 2 (EC 1.14.11.-) (Gibberellin C-20|
           oxidase 2) (GA 20-oxidase 2)
          Length = 378

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 10/66 (15%)
 Frame = -1

Query: 239 SFVALYNGILASCSCQCRSKRTLTRAAKANGLCPEDHSIM----DIDACHATR------W 90
           +F+AL NGI  SC  +    R   R + A  LCP+   ++    DI     TR      W
Sbjct: 287 TFMALSNGIFKSCLHRAVVNRESARKSMAFFLCPKKDKVVKPPSDILEKMKTRKYPDFTW 346

Query: 89  AMAMEF 72
           +M +EF
Sbjct: 347 SMFLEF 352

>NOTC1_RAT (Q07008) Neurogenic locus notch homolog protein 1 precursor (Notch 1)|
            [Contains: Notch 1 extracellular truncation; Notch 1
            intracellular domain]
          Length = 2531

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 19/69 (27%), Positives = 30/69 (43%)
 Frame = +3

Query: 24   TDTTKYHYTRSSDPITKFHCHRPPGCMTSINVHDTVVFWAQTVCLGGTSQRSFASTLTTA 203
            T+++ ++     D I  F C  PPG   S   +D     ++    GGT Q S+ +   T 
Sbjct: 988  TESSCFNGGTCVDGINSFTCLCPPGFTGSYCQYDVNECDSRPCLHGGTCQDSYGTYKCTC 1047

Query: 204  TSKYTII*C 230
               YT + C
Sbjct: 1048 PQGYTGLNC 1056

>NOTC1_MOUSE (Q01705) Neurogenic locus notch homolog protein 1 precursor (Notch 1)|
            (Motch A) (mT14) (p300) [Contains: Notch 1 extracellular
            truncation; Notch 1 intracellular domain]
          Length = 2531

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 19/69 (27%), Positives = 30/69 (43%)
 Frame = +3

Query: 24   TDTTKYHYTRSSDPITKFHCHRPPGCMTSINVHDTVVFWAQTVCLGGTSQRSFASTLTTA 203
            T+++ ++     D I  F C  PPG   S   +D     ++    GGT Q S+ +   T 
Sbjct: 988  TESSCFNGGTCVDGINSFTCLCPPGFTGSYCQYDVNECDSRPCLHGGTCQDSYGTYKCTC 1047

Query: 204  TSKYTII*C 230
               YT + C
Sbjct: 1048 PQGYTGLNC 1056

>UXAC_BACSK (Q5WJC1) Uronate isomerase (EC 5.3.1.12) (Glucuronate isomerase)|
          (Uronic isomerase)
          Length = 472

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 24 TDTTKYHYTRSSDPITKFHCHRPP 95
          T  T YH    + PI  +HCH PP
Sbjct: 19 TAETLYHTYAKTLPIIDYHCHVPP 42

>YNR6_YEAST (P53882) Hypothetical 67.4 kDa protein in RPS3-PSD1 intergenic|
           region
          Length = 636

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
 Frame = +3

Query: 105 TSINVHDTVVFWAQTVCLGGTSQRSFASTLTTATSKYTII-----*CDKTSAEASHSPVT 269
           TSI+V  T    + T     + Q +++S    ATS Y+II         TS  +S S +T
Sbjct: 78  TSIDVSSTSTLVSSTDSSSSSEQDTYSSQYDPATSSYSIITPSMSIFSSTSPMSSSSSIT 137

Query: 270 GLFSS 284
             +SS
Sbjct: 138 SEWSS 142

>CPB3_CAERE (Q6E3D4) Cytoplasmic polyadenylation element-binding protein 3|
          Length = 766

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 318 SRNCVLFSCHHCWRRDQLQGSE 253
           +RNC  + CH CW  D   G +
Sbjct: 542 NRNCFKYYCHTCWAVDHGHGHD 563

>POR_PEA (Q01289) Protochlorophyllide reductase, chloroplast precursor (EC|
           1.3.1.33) (PCR) (NADPH-protochlorophyllide
           oxidoreductase) (POR)
          Length = 399

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 191 CRSKRTLTRAAKANGLCPEDHSIMDID 111
           CR      RAAK+ GL  E+++IM +D
Sbjct: 118 CRDYLKAARAAKSAGLAKENYTIMHLD 144


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,430,670
Number of Sequences: 219361
Number of extensions: 914737
Number of successful extensions: 2138
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2138
length of database: 80,573,946
effective HSP length: 86
effective length of database: 61,708,900
effective search space used: 1481013600
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)