Clone Name | rbastl06d10 |
---|---|
Clone Library Name | barley_pub |
>gb|AC145798.2| Xenopus tropicalis clone CH216-53L7, complete sequence Length = 156486 Score = 40.1 bits (20), Expect = 0.82 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 gaatgttacatttcttcttt 77 |||||||||||||||||||| Sbjct: 58548 gaatgttacatttcttcttt 58567
>gb|AC149073.2| Sequence of an X. tropicalis BAC clone containing the bambi gene, complete sequence Length = 75688 Score = 40.1 bits (20), Expect = 0.82 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 gaatgttacatttcttcttt 77 |||||||||||||||||||| Sbjct: 27440 gaatgttacatttcttcttt 27421
>gb|AC104396.7| Mus musculus BAC clone RP23-413J8 from chromosome 3, complete sequence Length = 195860 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 60 atgttacatttcttctttc 78 ||||||||||||||||||| Sbjct: 146020 atgttacatttcttctttc 146002
>gb|AC110554.10| Mus musculus chromosome 8, clone RP23-249H16, complete sequence Length = 170361 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 33 actgagttcttccagttaa 51 ||||||||||||||||||| Sbjct: 5771 actgagttcttccagttaa 5789
>emb|AJ720031.1| Gallus gallus mRNA for hypothetical protein, clone 9l4 Length = 2495 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 cactgagttcttccagtta 50 ||||||||||||||||||| Sbjct: 1478 cactgagttcttccagtta 1460
>gb|AC116693.23| Mus musculus chromosome 8, clone RP24-372D19, complete sequence Length = 163719 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 33 actgagttcttccagttaa 51 ||||||||||||||||||| Sbjct: 159780 actgagttcttccagttaa 159798
>ref|NM_001006231.1| Gallus gallus similar to hypothetical protein FLJ21908 (LOC417811), mRNA Length = 2495 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 32 cactgagttcttccagtta 50 ||||||||||||||||||| Sbjct: 1478 cactgagttcttccagtta 1460
>emb|AL808026.10| Mouse DNA sequence from clone RP23-200N16 on chromosome X, complete sequence Length = 214016 Score = 38.2 bits (19), Expect = 3.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 30 tgcactgagttcttccagt 48 ||||||||||||||||||| Sbjct: 109018 tgcactgagttcttccagt 109000 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 749,631 Number of Sequences: 3902068 Number of extensions: 749631 Number of successful extensions: 45373 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 45364 Number of HSP's gapped (non-prelim): 9 length of query: 79 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 58 effective length of database: 17,151,101,840 effective search space: 994763906720 effective search space used: 994763906720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)