ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl06d08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 287 1e-74
2gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare str... 287 1e-74
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 287 1e-74
4dbj|AK106465.1| Oryza sativa (japonica cultivar-group) cDNA clon... 280 3e-72
5gb|AY110140.1| Zea mays CL37086_1 mRNA sequence 84 4e-13
6gb|AC111378.6| Rattus norvegicus 4 BAC CH230-126E21 (Children's ... 50 0.006
7gb|AC087251.2| Rattus norvegicus strain Brown Norway clone RP31-... 50 0.006
8gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold 50 0.006
9gb|AC018545.14| Homo sapiens 3 BAC RP11-145F16 (Roswell Park Can... 44 0.35
10emb|CR456683.7| Zebrafish DNA sequence from clone CH211-39I13 in... 44 0.35
11emb|BX284622.3| Zebrafish DNA sequence from clone DKEY-174P10 in... 44 0.35
12emb|CR749175.10| Zebrafish DNA sequence from clone DKEY-284P5 in... 44 0.35
13emb|AL591953.8| Mouse DNA sequence from clone RP23-381N9 on chro... 44 0.35
14gb|AC102483.8| Mus musculus chromosome 1, clone RP24-450F12, com... 42 1.4
15gb|AC147374.4| Mus musculus BAC clone RP24-230D18 from chromosom... 42 1.4
16gb|AC093477.6| Mus musculus chromosome 1, clone RP23-58B6, compl... 42 1.4
17gb|AC135036.2| Homo sapiens 3 BAC RP11-178L24 (Roswell Park Canc... 42 1.4
18gb|AC111013.3| Mus musculus BAC clone RP24-223F21 from 3, comple... 42 1.4
19emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4,... 42 1.4
20gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence 42 1.4
21dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
22gb|AC115029.12| Mus musculus chromosome 3, clone RP24-248I17, co... 42 1.4
23gb|AC153016.2| Mus musculus BAC clone RP23-182K18 from 13, compl... 42 1.4
24gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome 40 5.4
25gb|AC151980.3| Mus musculus BAC clone RP24-83M3 from chromosome ... 40 5.4
26gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7... 40 5.4
27gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence 40 5.4
28gb|AC084397.5| Trypanosoma brucei chromosome 6 clone RPCI93-1I18... 40 5.4
29gb|AC102143.10| Mus musculus chromosome 7, clone RP23-292M1, com... 40 5.4
30gb|AC146277.2| Pan troglodytes BAC clone CH251-17J20 from X, com... 40 5.4
31gb|AC146276.2| Pan troglodytes BAC clone CH251-149B14 from X, co... 40 5.4
32gb|AC144386.2| Pan troglodytes BAC clone CH251-313C12 from X, co... 40 5.4
33gb|AC154655.2| Mus musculus BAC clone RP24-263O11 from chromosom... 40 5.4
34gb|AC147066.2| Pan troglodytes BAC clone RP43-164F2 from 7, comp... 40 5.4
35gb|AC146512.2| Pan troglodytes BAC clone RP43-16E21 from 7, comp... 40 5.4
36gb|AC122420.4| Mus musculus BAC clone RP24-167C5 from chromosome... 40 5.4
37gb|AC129325.4| Mus musculus BAC clone RP23-255J24 from 1, comple... 40 5.4
38gb|AC006332.3| Homo sapiens BAC clone RP11-376O14 from 7, comple... 40 5.4
39gb|DP000038.2| Colobus guereza target 106 genomic scaffold 40 5.4
40gb|AE014075.1| Escherichia coli CFT073, complete genome 40 5.4
41gb|AC146154.3| Pan troglodytes BAC clone RP43-37E8 from 7, compl... 40 5.4
42gb|CP000243.1| Escherichia coli UTI89, complete genome 40 5.4
43emb|AL392087.7| Human DNA sequence from clone RP11-454H24 on chr... 40 5.4
44emb|AL359637.14| Human DNA sequence from clone RP11-484M8 on chr... 40 5.4
45gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 40 5.4
46emb|AL137248.21| Human DNA sequence from clone RP11-316G23 on ch... 40 5.4
47emb|X14202.1|ECNIRBC E. coli nirB, nirD, nirC and cysG genes 40 5.4
48emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 5.4
49emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete g... 40 5.4
50emb|CR293506.10| Zebrafish DNA sequence from clone CH211-144M15 ... 40 5.4
51emb|CR555301.4| Zebrafish DNA sequence from clone CH211-129A13 i... 40 5.4
52dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 40 5.4
53gb|AC114487.2| Homo sapiens chromosome 1 clone RP4-706L14, compl... 40 5.4
54dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, co... 40 5.4
55gb|AC090968.14| Staphylococcus aureus strain NCTC 8325 clone sab... 40 5.4
56gb|AC022903.12| Homo sapiens chromosome 17, clone RP11-642M2, co... 40 5.4
57gb|AC022260.6| Homo sapiens chromosome 8, clone RP11-426C8, comp... 40 5.4
58gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete... 40 5.4
59gb|AC158525.2| Mus musculus BAC clone RP23-367E3 from chromosome... 40 5.4
60gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, co... 40 5.4
61gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, compl... 40 5.4
62gb|AF132033.1|AF132033 Homo sapiens OPA-containing protein (HOPA... 40 5.4
63gb|AC016565.6|AC016565 Homo sapiens chromosome 5 clone CTC-538O1... 40 5.4
64gb|AC158675.4| Mus musculus 6 BAC RP23-180J21 (Roswell Park Canc... 40 5.4
65gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome 40 5.4
66gb|AC011737.10| Homo sapiens BAC clone RP11-33N4 from 2, complet... 40 5.4
67dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, com... 40 5.4
68dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic... 40 5.4
69gb|AC008518.3|AC008518 Homo sapiens chromosome 5 clone CTC-459I6... 40 5.4
70emb|AL590764.3|HS1091N2 Homo sapiens chromosome X from PAC 1091N... 40 5.4
71gb|AC005873.3|AC005873 citb_15_o_21, complete sequence 40 5.4
72gb|AC153653.4| Mus musculus BAC clone RP23-454L5 from 1, complet... 40 5.4
73emb|CT025579.12| Mouse DNA sequence from clone RP24-189A10 on ch... 40 5.4
74gb|U18997.1|ECOUW67 Escherichia coli K-12 chromosomal region fro... 40 5.4
75gb|AE014299.1| Shewanella oneidensis MR-1, complete genome 40 5.4
76gb|AC156797.2| Mus musculus BAC clone RP24-88A16 from chromosome... 40 5.4
77gb|AC173482.1| Mus musculus BAC clone RP23-383F20 from chromosom... 40 5.4
78emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4,... 40 5.4
79gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 40 5.4
80dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 5.4
81gb|CP000034.1| Shigella dysenteriae Sd197, complete genome 40 5.4
82emb|AL845291.5| Mouse DNA sequence from clone RP23-1O11 on chrom... 40 5.4
83gb|AC118599.24| Mus musculus chromosome 5, clone RP23-459G5, com... 40 5.4
84gb|CP000036.1| Shigella boydii Sb227, complete genome 40 5.4
85gb|CP000038.1| Shigella sonnei Ss046, complete genome 40 5.4 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  287 bits (145), Expect = 1e-74
 Identities = 259/294 (88%), Gaps = 6/294 (2%)
 Strand = Plus / Plus

                                                                            
Query: 99       taatggcctcacacaccagctgttgagatcacaactcaccacactgagacaaccaattgg 158
                ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 10601978 taatggcctcacacaccagttgttgagatcacaactcaccacactgagacaatcaattgg 10602037

                                                                            
Query: 159      acttattgtcactcactcctgtacttgagaacaatctcacaacccctcatgacaaacaac 218
                  ||||||||||||| | ||||||| ||||| || ||| ||| | |||||||||||| ||
Sbjct: 10602038 gtttattgtcactcattgctgtactcgagaaaaacctcgcaatctctcatgacaaac-ac 10602096

                                                                            
Query: 219      tgaaagaaagccaagaaaaaagaatgcaca--atcattttaggaatccctacttcgtacc 276
                ||||||||||||||||||||| ||||||||  |||||| ||| | ||||||||| |||||
Sbjct: 10602097 tgaaagaaagccaagaaaaaaaaatgcacatgatcattgtagtagtccctactttgtacc 10602156

                                                                            
Query: 277      agagtgtctaccatttgatgaaagccttctgctatcggtaccacttaaaggttgccttcc 336
                ||  ||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||
Sbjct: 10602157 agcatgtctaccatttgatgagagccttctgctatcgctaccacttaaaggttgccgtcc 10602216

                                                                      
Query: 337      agatctgttttgtccatttgaggcttttctcgacgccaatggtatttgggaatg 390
                |||||| ||   |||||| |||| ||||||||| ||  |||||||||| |||||
Sbjct: 10602217 agatctatt---tccattggaggtttttctcgaagcagatggtatttgagaatg 10602267



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 62       aactcaacaaagcctgataggccaa 86
                ||||||||| |||||||||||||||
Sbjct: 10601939 aactcaacatagcctgataggccaa 10601963
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>gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0032G21, from chromosome 3, complete sequence
          Length = 187621

 Score =  287 bits (145), Expect = 1e-74
 Identities = 259/294 (88%), Gaps = 6/294 (2%)
 Strand = Plus / Plus

                                                                         
Query: 99    taatggcctcacacaccagctgttgagatcacaactcaccacactgagacaaccaattgg 158
             ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 18892 taatggcctcacacaccagttgttgagatcacaactcaccacactgagacaatcaattgg 18951

                                                                         
Query: 159   acttattgtcactcactcctgtacttgagaacaatctcacaacccctcatgacaaacaac 218
               ||||||||||||| | ||||||| ||||| || ||| ||| | |||||||||||| ||
Sbjct: 18952 gtttattgtcactcattgctgtactcgagaaaaacctcgcaatctctcatgacaaac-ac 19010

                                                                         
Query: 219   tgaaagaaagccaagaaaaaagaatgcaca--atcattttaggaatccctacttcgtacc 276
             ||||||||||||||||||||| ||||||||  |||||| ||| | ||||||||| |||||
Sbjct: 19011 tgaaagaaagccaagaaaaaaaaatgcacatgatcattgtagtagtccctactttgtacc 19070

                                                                         
Query: 277   agagtgtctaccatttgatgaaagccttctgctatcggtaccacttaaaggttgccttcc 336
             ||  ||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||
Sbjct: 19071 agcatgtctaccatttgatgagagccttctgctatcgctaccacttaaaggttgccgtcc 19130

                                                                   
Query: 337   agatctgttttgtccatttgaggcttttctcgacgccaatggtatttgggaatg 390
             |||||| ||   |||||| |||| ||||||||| ||  |||||||||| |||||
Sbjct: 19131 agatctatt---tccattggaggtttttctcgaagcagatggtatttgagaatg 19181



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 62    aactcaacaaagcctgataggccaa 86
             ||||||||| |||||||||||||||
Sbjct: 18853 aactcaacatagcctgataggccaa 18877
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  287 bits (145), Expect = 1e-74
 Identities = 259/294 (88%), Gaps = 6/294 (2%)
 Strand = Plus / Plus

                                                                            
Query: 99       taatggcctcacacaccagctgttgagatcacaactcaccacactgagacaaccaattgg 158
                ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 10600079 taatggcctcacacaccagttgttgagatcacaactcaccacactgagacaatcaattgg 10600138

                                                                            
Query: 159      acttattgtcactcactcctgtacttgagaacaatctcacaacccctcatgacaaacaac 218
                  ||||||||||||| | ||||||| ||||| || ||| ||| | |||||||||||| ||
Sbjct: 10600139 gtttattgtcactcattgctgtactcgagaaaaacctcgcaatctctcatgacaaac-ac 10600197

                                                                            
Query: 219      tgaaagaaagccaagaaaaaagaatgcaca--atcattttaggaatccctacttcgtacc 276
                ||||||||||||||||||||| ||||||||  |||||| ||| | ||||||||| |||||
Sbjct: 10600198 tgaaagaaagccaagaaaaaaaaatgcacatgatcattgtagtagtccctactttgtacc 10600257

                                                                            
Query: 277      agagtgtctaccatttgatgaaagccttctgctatcggtaccacttaaaggttgccttcc 336
                ||  ||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||
Sbjct: 10600258 agcatgtctaccatttgatgagagccttctgctatcgctaccacttaaaggttgccgtcc 10600317

                                                                      
Query: 337      agatctgttttgtccatttgaggcttttctcgacgccaatggtatttgggaatg 390
                |||||| ||   |||||| |||| ||||||||| ||  |||||||||| |||||
Sbjct: 10600318 agatctatt---tccattggaggtttttctcgaagcagatggtatttgagaatg 10600368



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 62       aactcaacaaagcctgataggccaa 86
                ||||||||| |||||||||||||||
Sbjct: 10600040 aactcaacatagcctgataggccaa 10600064
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>dbj|AK106465.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-H04, full
            insert sequence
          Length = 1808

 Score =  280 bits (141), Expect = 3e-72
 Identities = 258/294 (87%), Gaps = 6/294 (2%)
 Strand = Plus / Minus

                                                                        
Query: 99   taatggcctcacacaccagctgttgagatcacaactcaccacactgagacaaccaattgg 158
            ||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||
Sbjct: 1701 taatggcctcacacaccagttgttgggatcacaactcaccacactgagacaatcaattgg 1642

                                                                        
Query: 159  acttattgtcactcactcctgtacttgagaacaatctcacaacccctcatgacaaacaac 218
              ||||||||||||| | ||||||| ||||| || ||| ||| | |||||||||||| ||
Sbjct: 1641 gtttattgtcactcattgctgtactcgagaaaaacctcgcaatctctcatgacaaac-ac 1583

                                                                        
Query: 219  tgaaagaaagccaagaaaaaagaatgcaca--atcattttaggaatccctacttcgtacc 276
            ||||||||||||||||||||| ||||||||  |||||| ||| | ||||||||| |||||
Sbjct: 1582 tgaaagaaagccaagaaaaaaaaatgcacatgatcattgtagtagtccctactttgtacc 1523

                                                                        
Query: 277  agagtgtctaccatttgatgaaagccttctgctatcggtaccacttaaaggttgccttcc 336
            ||  ||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||
Sbjct: 1522 agcatgtctaccatttgatgagagccttctgctatcgctaccacttaaaggttgccgtcc 1463

                                                                  
Query: 337  agatctgttttgtccatttgaggcttttctcgacgccaatggtatttgggaatg 390
            |||||| ||   |||||| |||| ||||||||| ||  |||||||||| |||||
Sbjct: 1462 agatctatt---tccattggaggtttttctcgaagcagatggtatttgagaatg 1412



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 62   aactcaacaaagcctgataggccaa 86
            ||||||||| |||||||||||||||
Sbjct: 1740 aactcaacatagcctgataggccaa 1716
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>gb|AY110140.1| Zea mays CL37086_1 mRNA sequence
          Length = 1140

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 84/98 (85%)
 Strand = Plus / Plus

                                                                       
Query: 119 tgttgagatcacaactcaccacactgagacaaccaattggacttattgtcactcactcct 178
           ||||||||||||||||||||||||||| |||| |||| ||  ||||||||||||| | ||
Sbjct: 82  tgttgagatcacaactcaccacactgacacaatcaatcgggtttattgtcactcattgct 141

                                                 
Query: 179 gtacttgagaacaatctcacaacccctcatgacaaaca 216
           |||||  ||||||  ||||||| | ||| |||||||||
Sbjct: 142 gtactcaagaacatcctcacaatctctcgtgacaaaca 179
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>gb|AC111378.6| Rattus norvegicus 4 BAC CH230-126E21 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 171142

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 212   aaacaactgaaagaaagccaagaaaaaag 240
             ||||||||||||||||| |||||||||||
Sbjct: 63705 aaacaactgaaagaaagacaagaaaaaag 63677
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>gb|AC087251.2| Rattus norvegicus strain Brown Norway clone RP31-186N2, complete sequence
          Length = 149358

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 212    aaacaactgaaagaaagccaagaaaaaag 240
              ||||||||||||||||| |||||||||||
Sbjct: 145771 aaacaactgaaagaaagacaagaaaaaag 145799
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>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold
          Length = 1888123

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                            
Query: 212     aaacaactgaaagaaagccaagaaaaaag 240
               ||||||||||||||||| |||||||||||
Sbjct: 1639025 aaacaactgaaagaaagacaagaaaaaag 1639053
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>gb|AC018545.14| Homo sapiens 3 BAC RP11-145F16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 170359

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 212    aaacaactgaaagaaagccaagaaaa 237
              ||||||||||| ||||||||||||||
Sbjct: 159337 aaacaactgaatgaaagccaagaaaa 159312
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>emb|CR456683.7| Zebrafish DNA sequence from clone CH211-39I13 in linkage group 13,
             complete sequence
          Length = 166196

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 24    ttatattatatattatgaacat 45
             ||||||||||||||||||||||
Sbjct: 97690 ttatattatatattatgaacat 97711
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>emb|BX284622.3| Zebrafish DNA sequence from clone DKEY-174P10 in linkage group 19,
             complete sequence
          Length = 126451

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 24    ttatattatatattatgaacat 45
             ||||||||||||||||||||||
Sbjct: 20177 ttatattatatattatgaacat 20198
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>emb|CR749175.10| Zebrafish DNA sequence from clone DKEY-284P5 in linkage group 19,
             complete sequence
          Length = 28926

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 24    ttatattatatattatgaacat 45
             ||||||||||||||||||||||
Sbjct: 25098 ttatattatatattatgaacat 25119
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>emb|AL591953.8| Mouse DNA sequence from clone RP23-381N9 on chromosome 5, complete
              sequence
          Length = 172613

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 221    aaagaaagccaagaaaaaagaa 242
              ||||||||||||||||||||||
Sbjct: 101872 aaagaaagccaagaaaaaagaa 101851
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>gb|AC102483.8| Mus musculus chromosome 1, clone RP24-450F12, complete sequence
          Length = 167656

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 30    tatatattatgaacatgacaggaat 54
             |||||||||| ||||||||||||||
Sbjct: 63401 tatatattattaacatgacaggaat 63425
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>gb|AC147374.4| Mus musculus BAC clone RP24-230D18 from chromosome 3, complete sequence
          Length = 165708

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 27     tattatatattatgaacatga 47
              |||||||||||||||||||||
Sbjct: 146666 tattatatattatgaacatga 146686
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>gb|AC093477.6| Mus musculus chromosome 1, clone RP23-58B6, complete sequence
          Length = 225321

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 103   ggcctcacacaccagctgttg 123
             |||||||||||||||||||||
Sbjct: 99574 ggcctcacacaccagctgttg 99554
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>gb|AC135036.2| Homo sapiens 3 BAC RP11-178L24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 73388

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 229   ccaagaaaaaagaatgcacaa 249
             |||||||||||||||||||||
Sbjct: 71022 ccaagaaaaaagaatgcacaa 71002
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>gb|AC111013.3| Mus musculus BAC clone RP24-223F21 from 3, complete sequence
          Length = 144931

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 27     tattatatattatgaacatga 47
              |||||||||||||||||||||
Sbjct: 138730 tattatatattatgaacatga 138710
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>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02,
             complete sequence
          Length = 153623

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 28    attatatattatgaacatgacagga 52
             |||||||| ||||||||||||||||
Sbjct: 92562 attatataatatgaacatgacagga 92538
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>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence
          Length = 181577

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 28     attatatattatgaacatgacagga 52
              |||||||| ||||||||||||||||
Sbjct: 173306 attatataatatgaacatgacagga 173282
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 28       attatatattatgaacatgacagga 52
                |||||||| ||||||||||||||||
Sbjct: 33742119 attatataatatgaacatgacagga 33742095



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 203      cctcatgacaaacaactgaa 222
                ||||||||||||||||||||
Sbjct: 22328065 cctcatgacaaacaactgaa 22328046
to top
>gb|AC115029.12| Mus musculus chromosome 3, clone RP24-248I17, complete sequence
          Length = 171133

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 19     tttccttatattatatattat 39
              |||||||||||||||||||||
Sbjct: 114755 tttccttatattatatattat 114775
to top
>gb|AC153016.2| Mus musculus BAC clone RP23-182K18 from 13, complete sequence
          Length = 224420

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 219    tgaaagaaagccaagaaaaaa 239
              |||||||||||||||||||||
Sbjct: 194419 tgaaagaaagccaagaaaaaa 194399
to top
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 287     ccatttgatgaaagccttct 306
               ||||||||||||||||||||
Sbjct: 3467236 ccatttgatgaaagccttct 3467255
to top
>gb|AC151980.3| Mus musculus BAC clone RP24-83M3 from chromosome 8, complete sequence
          Length = 253457

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 330   gccttccagatctgttttgtccat 353
             |||||||| |||||||||||||||
Sbjct: 27555 gccttccatatctgttttgtccat 27532
to top
>gb|AE014842.1| Plasmodium falciparum 3D7 chromosome 11 section 7 of 8 of the complete
              sequence
          Length = 253151

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     ttttccttatattatatatt 37
              ||||||||||||||||||||
Sbjct: 119537 ttttccttatattatatatt 119518
to top
>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence
          Length = 1618915

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 226     aagccaagaaaaaagaatgc 245
               ||||||||||||||||||||
Sbjct: 1493365 aagccaagaaaaaagaatgc 1493346
to top
>gb|AC084397.5| Trypanosoma brucei chromosome 6 clone RPCI93-1I18, complete sequence
          Length = 169543

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   aagccaagaaaaaagaatgc 245
             ||||||||||||||||||||
Sbjct: 43993 aagccaagaaaaaagaatgc 43974
to top
>gb|AC102143.10| Mus musculus chromosome 7, clone RP23-292M1, complete sequence
          Length = 169980

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   gaaaaaagaatgcacaatca 252
             ||||||||||||||||||||
Sbjct: 48650 gaaaaaagaatgcacaatca 48631
to top
>gb|AC146277.2| Pan troglodytes BAC clone CH251-17J20 from X, complete sequence
          Length = 160219

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      aaatttcctttcttttcctt 25
              ||||||||||||||||||||
Sbjct: 127133 aaatttcctttcttttcctt 127152
to top
>gb|AC146276.2| Pan troglodytes BAC clone CH251-149B14 from X, complete sequence
          Length = 180335

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     aaatttcctttcttttcctt 25
             ||||||||||||||||||||
Sbjct: 71007 aaatttcctttcttttcctt 70988
to top
>gb|AC144386.2| Pan troglodytes BAC clone CH251-313C12 from X, complete sequence
          Length = 202661

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      aaatttcctttcttttcctt 25
              ||||||||||||||||||||
Sbjct: 165762 aaatttcctttcttttcctt 165743
to top
>gb|AC154655.2| Mus musculus BAC clone RP24-263O11 from chromosome 14, complete sequence
          Length = 196744

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     taaaaactcaacaaagcctg 77
              ||||||||||||||||||||
Sbjct: 175075 taaaaactcaacaaagcctg 175094
to top
>gb|AC147066.2| Pan troglodytes BAC clone RP43-164F2 from 7, complete sequence
          Length = 149431

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 2     taacaaatttcctttcttttcctt 25
             |||||||| |||||||||||||||
Sbjct: 58490 taacaaatctcctttcttttcctt 58467
to top
>gb|AC146512.2| Pan troglodytes BAC clone RP43-16E21 from 7, complete sequence
          Length = 178648

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 2      taacaaatttcctttcttttcctt 25
              |||||||| |||||||||||||||
Sbjct: 126010 taacaaatctcctttcttttcctt 126033
to top
>gb|AC122420.4| Mus musculus BAC clone RP24-167C5 from chromosome 8, complete sequence
          Length = 179058

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 330    gccttccagatctgttttgtccat 353
              |||||||| |||||||||||||||
Sbjct: 118608 gccttccatatctgttttgtccat 118585
to top
>gb|AC129325.4| Mus musculus BAC clone RP23-255J24 from 1, complete sequence
          Length = 194106

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    tcctttcttttccttatatt 30
             ||||||||||||||||||||
Sbjct: 63100 tcctttcttttccttatatt 63119
to top
>gb|AC006332.3| Homo sapiens BAC clone RP11-376O14 from 7, complete sequence
          Length = 153477

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 2     taacaaatttcctttcttttcctt 25
             |||||||| |||||||||||||||
Sbjct: 95985 taacaaatctcctttcttttcctt 96008
to top
>gb|DP000038.2| Colobus guereza target 106 genomic scaffold
          Length = 481828

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     ttcctttcttttccttatat 29
              ||||||||||||||||||||
Sbjct: 200045 ttcctttcttttccttatat 200064
to top
>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 287     ccatttgatgaaagccttct 306
               ||||||||||||||||||||
Sbjct: 3929405 ccatttgatgaaagccttct 3929424
to top
>gb|AC146154.3| Pan troglodytes BAC clone RP43-37E8 from 7, complete sequence
          Length = 240699

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    atattatatattatgaacat 45
             ||||||||||||||||||||
Sbjct: 41294 atattatatattatgaacat 41275
to top
>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 287     ccatttgatgaaagccttct 306
               ||||||||||||||||||||
Sbjct: 3756021 ccatttgatgaaagccttct 3756040
to top
>emb|AL392087.7| Human DNA sequence from clone RP11-454H24 on chromosome 10 Contains part
              of a novel gene (KIAA0534), complete sequence
          Length = 193980

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     tcttttccttatattatata 35
              ||||||||||||||||||||
Sbjct: 161842 tcttttccttatattatata 161823
to top
>emb|AL359637.14| Human DNA sequence from clone RP11-484M8 on chromosome 13, complete
              sequence
          Length = 174135

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     ttccttatattatatattat 39
              ||||||||||||||||||||
Sbjct: 154993 ttccttatattatatattat 154974
to top
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 287     ccatttgatgaaagccttct 306
               ||||||||||||||||||||
Sbjct: 3496039 ccatttgatgaaagccttct 3496058
to top
>emb|AL137248.21| Human DNA sequence from clone RP11-316G23 on chromosome 13q12.1-12.3,
              complete sequence
          Length = 186343

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 243    tgcacaatcattttaggaat 262
              ||||||||||||||||||||
Sbjct: 167882 tgcacaatcattttaggaat 167863
to top
>emb|X14202.1|ECNIRBC E. coli nirB, nirD, nirC and cysG genes
          Length = 5618

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 287  ccatttgatgaaagccttct 306
            ||||||||||||||||||||
Sbjct: 4412 ccatttgatgaaagccttct 4431
to top
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 2602197

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 238    aagaatgcacaatcatttta 257
              ||||||||||||||||||||
Sbjct: 978442 aagaatgcacaatcatttta 978423
to top
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome
          Length = 2799802

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 370     cgccaatggtatttgggaat 389
               ||||||||||||||||||||
Sbjct: 2445798 cgccaatggtatttgggaat 2445779
to top
>emb|CR293506.10| Zebrafish DNA sequence from clone CH211-144M15 in linkage group 1,
             complete sequence
          Length = 70042

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 248   aatcattttaggaatccctacttc 271
             ||||||||||| ||||||||||||
Sbjct: 18080 aatcattttagaaatccctacttc 18057
to top
>emb|CR555301.4| Zebrafish DNA sequence from clone CH211-129A13 in linkage group 13,
              complete sequence
          Length = 168518

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      ataacaaatttcctttcttt 20
              ||||||||||||||||||||
Sbjct: 112103 ataacaaatttcctttcttt 112122
to top
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 287     ccatttgatgaaagccttct 306
               ||||||||||||||||||||
Sbjct: 4142399 ccatttgatgaaagccttct 4142380
to top
>gb|AC114487.2| Homo sapiens chromosome 1 clone RP4-706L14, complete sequence
          Length = 160957

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 273   taccagagtgtctaccattt 292
             ||||||||||||||||||||
Sbjct: 84177 taccagagtgtctaccattt 84158
to top
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome
          Length = 2878529

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 370     cgccaatggtatttgggaat 389
               ||||||||||||||||||||
Sbjct: 2524243 cgccaatggtatttgggaat 2524224
to top
>gb|AC090968.14| Staphylococcus aureus strain NCTC 8325 clone sabac-126, complete
             sequence
          Length = 39425

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 370   cgccaatggtatttgggaat 389
             ||||||||||||||||||||
Sbjct: 19849 cgccaatggtatttgggaat 19868
to top
>gb|AC022903.12| Homo sapiens chromosome 17, clone RP11-642M2, complete sequence
          Length = 191818

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 8     atttcctttcttttccttatatta 31
             |||||||||||||| |||||||||
Sbjct: 60905 atttcctttcttttgcttatatta 60928
to top
>gb|AC022260.6| Homo sapiens chromosome 8, clone RP11-426C8, complete sequence
          Length = 168515

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    cttttccttatattatatat 36
             ||||||||||||||||||||
Sbjct: 84356 cttttccttatattatatat 84337
to top
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome
          Length = 2809422

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 370     cgccaatggtatttgggaat 389
               ||||||||||||||||||||
Sbjct: 2453736 cgccaatggtatttgggaat 2453717
to top
>gb|AC158525.2| Mus musculus BAC clone RP23-367E3 from chromosome 14, complete sequence
          Length = 179650

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 58     taaaaactcaacaaagcctg 77
              ||||||||||||||||||||
Sbjct: 179413 taaaaactcaacaaagcctg 179394
to top
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome
          Length = 2821361

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 370     cgccaatggtatttgggaat 389
               ||||||||||||||||||||
Sbjct: 2464402 cgccaatggtatttgggaat 2464383
to top
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome
          Length = 2872769

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 370     cgccaatggtatttgggaat 389
               ||||||||||||||||||||
Sbjct: 2517303 cgccaatggtatttgggaat 2517284
to top
>gb|AF132033.1|AF132033 Homo sapiens OPA-containing protein (HOPA) gene, complete cds
          Length = 25187

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 331   ccttccagatctgttttgtc 350
             ||||||||||||||||||||
Sbjct: 11722 ccttccagatctgttttgtc 11741
to top
>gb|AC016565.6|AC016565 Homo sapiens chromosome 5 clone CTC-538O12, complete sequence
          Length = 140092

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 343   gttttgtccatttgaggctt 362
             ||||||||||||||||||||
Sbjct: 12470 gttttgtccatttgaggctt 12489
to top
>gb|AC158675.4| Mus musculus 6 BAC RP23-180J21 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 226948

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 14     tttcttttccttatattatatattatga 41
              ||||||| ||||||||||||||| ||||
Sbjct: 118932 tttctttcccttatattatatataatga 118959
to top
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 287     ccatttgatgaaagccttct 306
               ||||||||||||||||||||
Sbjct: 4305468 ccatttgatgaaagccttct 4305449
to top
>gb|AC011737.10| Homo sapiens BAC clone RP11-33N4 from 2, complete sequence
          Length = 176709

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   tgaaagaaagccaagaaaaa 238
             ||||||||||||||||||||
Sbjct: 76221 tgaaagaaagccaagaaaaa 76202
to top
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2
          Length = 2820462

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 370     cgccaatggtatttgggaat 389
               ||||||||||||||||||||
Sbjct: 2466632 cgccaatggtatttgggaat 2466613
to top
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome
          Length = 2814816

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 370     cgccaatggtatttgggaat 389
               ||||||||||||||||||||
Sbjct: 2453224 cgccaatggtatttgggaat 2453205
to top
>gb|AC008518.3|AC008518 Homo sapiens chromosome 5 clone CTC-459I6, complete sequence
          Length = 172551

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 343    gttttgtccatttgaggctt 362
              ||||||||||||||||||||
Sbjct: 109022 gttttgtccatttgaggctt 109041
to top
>emb|AL590764.3|HS1091N2 Homo sapiens chromosome X from PAC 1091N2, region GJB1-DXS559 map Xq13.1,
              complete sequence
          Length = 201197

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 331    ccttccagatctgttttgtc 350
              ||||||||||||||||||||
Sbjct: 134850 ccttccagatctgttttgtc 134869
to top
>gb|AC005873.3|AC005873 citb_15_o_21, complete sequence
          Length = 195653

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     tcttttccttatattatata 35
              ||||||||||||||||||||
Sbjct: 153156 tcttttccttatattatata 153175
to top
>gb|AC153653.4| Mus musculus BAC clone RP23-454L5 from 1, complete sequence
          Length = 180403

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     tcctttcttttccttatatt 30
              ||||||||||||||||||||
Sbjct: 154939 tcctttcttttccttatatt 154920
to top
>emb|CT025579.12| Mouse DNA sequence from clone RP24-189A10 on chromosome 14, complete
              sequence
          Length = 173961

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 210    acaaacaactgaaagaaagccaag 233
              |||||||| |||||||||||||||
Sbjct: 124835 acaaacaaatgaaagaaagccaag 124858
to top
>gb|U18997.1|ECOUW67 Escherichia coli K-12 chromosomal region from 67.4 to 76.0 minutes
          Length = 372438

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    ccatttgatgaaagccttct 306
              ||||||||||||||||||||
Sbjct: 278764 ccatttgatgaaagccttct 278783
to top
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 219     tgaaagaaagccaagaaaaa 238
               ||||||||||||||||||||
Sbjct: 2738682 tgaaagaaagccaagaaaaa 2738663
to top
>gb|AC156797.2| Mus musculus BAC clone RP24-88A16 from chromosome 14, complete sequence
          Length = 166341

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 210   acaaacaactgaaagaaagccaag 233
             |||||||| |||||||||||||||
Sbjct: 84646 acaaacaaatgaaagaaagccaag 84669
to top
>gb|AC173482.1| Mus musculus BAC clone RP23-383F20 from chromosome 14, complete
             sequence
          Length = 216037

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   tcacaactcaccacactgag 146
             ||||||||||||||||||||
Sbjct: 62839 tcacaactcaccacactgag 62858
to top
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22,
             complete sequence
          Length = 147214

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 203   cctcatgacaaacaactgaa 222
             ||||||||||||||||||||
Sbjct: 78969 cctcatgacaaacaactgaa 78950
to top
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 287     ccatttgatgaaagccttct 306
               ||||||||||||||||||||
Sbjct: 4285145 ccatttgatgaaagccttct 4285164
to top
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 287     ccatttgatgaaagccttct 306
               ||||||||||||||||||||
Sbjct: 4217923 ccatttgatgaaagccttct 4217942
to top
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 287     ccatttgatgaaagccttct 306
               ||||||||||||||||||||
Sbjct: 3265059 ccatttgatgaaagccttct 3265078
to top
>emb|AL845291.5| Mouse DNA sequence from clone RP23-1O11 on chromosome 2, complete
             sequence
          Length = 209914

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    aacatgacaggaattgctaa 60
             ||||||||||||||||||||
Sbjct: 15081 aacatgacaggaattgctaa 15062
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>gb|AC118599.24| Mus musculus chromosome 5, clone RP23-459G5, complete sequence
          Length = 194003

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 238   aagaatgcacaatcattttaggaa 261
             |||||||||| |||||||||||||
Sbjct: 14363 aagaatgcaccatcattttaggaa 14386
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>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 287     ccatttgatgaaagccttct 306
               ||||||||||||||||||||
Sbjct: 3336762 ccatttgatgaaagccttct 3336781
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>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 287     ccatttgatgaaagccttct 306
               ||||||||||||||||||||
Sbjct: 3660016 ccatttgatgaaagccttct 3660035


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,285,211
Number of Sequences: 3902068
Number of extensions: 5285211
Number of successful extensions: 144892
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 144264
Number of HSP's gapped (non-prelim): 620
length of query: 406
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 384
effective length of database: 17,147,199,772
effective search space: 6584524712448
effective search space used: 6584524712448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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