Clone Name | rbastl06d07 |
---|---|
Clone Library Name | barley_pub |
>DLL3_HUMAN (Q9NYJ7) Delta-like protein 3 precursor (Drosophila Delta homolog| 3) Length = 618 Score = 37.4 bits (85), Expect = 0.010 Identities = 31/120 (25%), Positives = 43/120 (35%), Gaps = 33/120 (27%) Frame = -1 Query: 270 CPCCARFYGM---LALIQCLLHSC*NVSICCGAAE---------------YSCKKFYDEC 145 C C FYG+ ++ + C C N +C G A+ +C+K D C Sbjct: 298 CTCPRGFYGLRCEVSGVTCADGPCFNGGLCVGGADPDSAYICHCPPGFQGSNCEKRVDRC 357 Query: 144 LLHSC*NVSIC------------CGAAEYSCKKFYDECLLHSC*NVSICC---GAAEYSC 10 L C N +C G A C+ D+C +C N C GA SC Sbjct: 358 SLQPCRNGGLCLDLGHALRCRCRAGFAGPRCEHDLDDCAGRACANGGTCVEGGGAHRCSC 417
>DLLA_BRARE (Q6DI48) Delta-like protein A precursor (DeltaA protein)| Length = 772 Score = 37.0 bits (84), Expect = 0.013 Identities = 31/116 (26%), Positives = 42/116 (36%), Gaps = 29/116 (25%) Frame = -1 Query: 270 CPCCARFYGM---LALIQCLLHSC*NVSICC-------------GAAEYSCKKFYDECLL 139 C C FYG L+ + C C N C G A ++C+K D C Sbjct: 354 CTCPPGFYGKNCELSAMTCADGPCFNGGRCADNPDGGYFCQCPTGYAGFNCEKKIDHCSS 413 Query: 138 HSC*NVSICC------------GAAEYSCKKFYDECLLHSC*NVSICC-GAAEYSC 10 C N + C G +C + DEC ++ C N C GA+ Y C Sbjct: 414 SPCSNGARCVDLVNSYLCQCPDGFTGMNCDRAGDECSMYPCQNGGTCQEGASGYMC 469
>DLL3_MOUSE (O88516) Delta-like protein 3 precursor (Drosophila Delta homolog| 3) (M-Delta-3) Length = 592 Score = 34.7 bits (78), Expect = 0.063 Identities = 29/120 (24%), Positives = 42/120 (35%), Gaps = 33/120 (27%) Frame = -1 Query: 270 CPCCARFYGM---LALIQCLLHSC*NVSICCGAAE---------------YSCKKFYDEC 145 C C FYG+ ++ + C C N +C G + +C+K D C Sbjct: 296 CACPRGFYGLRCEVSGVTCADGPCFNGGLCVGGEDPDSAYVCHCPPGFQGSNCEKRVDRC 355 Query: 144 LLHSC*NVSIC------------CGAAEYSCKKFYDECLLHSC*NVSICC---GAAEYSC 10 L C N +C G A C+ D+C +C N C G+ SC Sbjct: 356 SLQPCQNGGLCLDLGHALRCRCRAGFAGPRCEHDLDDCAGRACANGGTCVEGGGSRRCSC 415
>CUBN_CANFA (Q9TU53) Cubilin precursor| Length = 3620 Score = 33.5 bits (75), Expect = 0.14 Identities = 28/97 (28%), Positives = 37/97 (38%), Gaps = 12/97 (12%) Frame = -1 Query: 261 CARFYGMLALIQCLLHSC*NVSICCGAAEYSCKKFYDECLLHSC*NVS--------IC-- 112 C+ G L L CL N G C + D CL H C N +C Sbjct: 363 CSSVLGSLPLCTCLPGYTGN-----GYGPNGCAQLSDTCLSHPCLNGQCIETVSGYLCKC 417 Query: 111 -CGAAEYSCKKFYDECLLHSC*NVSICC-GAAEYSCQ 7 G A +C + +ECL + C N C G +SC+ Sbjct: 418 ESGWAGINCTENINECLSNPCFNGGTCVDGVNAFSCE 454
>DLL3_RAT (O88671) Delta-like protein 3 precursor (Drosophila Delta homolog| 3) Length = 589 Score = 33.1 bits (74), Expect = 0.18 Identities = 29/120 (24%), Positives = 41/120 (34%), Gaps = 33/120 (27%) Frame = -1 Query: 270 CPCCARFYGM---LALIQCLLHSC*NVSICCGAAE---------------YSCKKFYDEC 145 C C FYG ++ + C C N +C G + +C++ D C Sbjct: 300 CACPRGFYGPRCEVSGVTCADGPCFNGGLCVGGEDPDSAYVCHCPPAFQGSNCERRVDRC 359 Query: 144 LLHSC*NVSIC------------CGAAEYSCKKFYDECLLHSC*NVSICC---GAAEYSC 10 L C N +C G A C+ D+C +C N C GA SC Sbjct: 360 SLQPCQNGGLCLDLGHALRCRCRAGFAGPRCEHDLDDCAGRACANGGTCVEGGGARRCSC 419
>SLIT1_RAT (O88279) Slit homolog 1 protein precursor (Slit-1) (Multiple| epidermal growth factor-like domains 4) Length = 1531 Score = 32.3 bits (72), Expect = 0.31 Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 30/117 (25%) Frame = -1 Query: 270 CPCCARFYGMLALIQ---CLLHSC*NVSICC-GAAEYSCK-----------KFYDECL-- 142 C C + F G+ + C+ H C N +C G Y+C+ + D C Sbjct: 991 CSCPSGFEGLTCGMNTDDCVKHDCVNGGVCVDGIGNYTCQCPLQYTGRACEQLVDFCSPD 1050 Query: 141 LHSC*NVSICCGAAEY------------SCKKFYDECLLHSC*NVSICCGAA-EYSC 10 L+ C + + C G E +C K D+C H C N + C Y+C Sbjct: 1051 LNPCQHEAQCVGTPEGPRCECVPGYTGDNCSKNQDDCKDHQCQNGAQCVDEINSYAC 1107 Score = 30.0 bits (66), Expect = 1.5 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 16/71 (22%) Frame = -1 Query: 171 SCKKFYDECLLHSC*NVSIC---------------CGAAEYSCKKFYDECLLHSC*NVSI 37 +C+ D C + C N C G +C D+C+ H C N + Sbjct: 960 NCEVSLDSCSSNPCGNGGTCHAQEGEDAGFTCSCPSGFEGLTCGMNTDDCVKHDCVNGGV 1019 Query: 36 CC-GAAEYSCQ 7 C G Y+CQ Sbjct: 1020 CVDGIGNYTCQ 1030
>NOTCH_DROME (P07207) Neurogenic locus Notch protein precursor| Length = 2703 Score = 31.6 bits (70), Expect = 0.53 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 16/70 (22%) Frame = -1 Query: 171 SCKKFYDECLLHSC*NVSICC-GAAEYSCK-------KF----YDECLLHS---C*NVSI 37 +C++ YD+CL H C N C G ++Y+C+ +F DEC C N + Sbjct: 289 NCEQNYDDCLGHLCQNGGTCIDGISDYTCRCPPNFTGRFCQDDVDECAQRDHPVCQNGAT 348 Query: 36 CCGA-AEYSC 10 C YSC Sbjct: 349 CTNTHGSYSC 358 Score = 29.6 bits (65), Expect = 2.0 Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 13/66 (19%) Frame = -1 Query: 168 CKKFYDECLLHSC*NVSICCGAAE-YSC---KKFY--------DECLLHSC*NVSIC-CG 28 C+K DEC+ C N +C Y C + FY DEC + C N C G Sbjct: 712 CEKNVDECISSPCANNGVCIDQVNGYKCECPRGFYDAHCLSDVDECASNPCVNEGRCEDG 771 Query: 27 AAEYSC 10 E+ C Sbjct: 772 INEFIC 777 Score = 28.1 bits (61), Expect = 5.9 Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 12/63 (19%) Frame = -1 Query: 186 GAAEYSCKKFYDECLLHSC*NVSIC---CGAAEYSCKKFY---------DECLLHSC*NV 43 G A C+K DEC C N C GA E C++ + D+C + C N Sbjct: 1174 GYAGSYCQKEIDECQSQPCQNGGTCRDLIGAYECQCRQGFQGQNCELNIDDCAPNPCQNG 1233 Query: 42 SIC 34 C Sbjct: 1234 GTC 1236
>PRP4B_HUMAN (Q13523) Serine/threonine-protein kinase PRP4 homolog (EC 2.7.11.1)| (PRP4 pre-mRNA-processing factor 4 homolog) (PRP4 kinase) Length = 1007 Score = 31.2 bits (69), Expect = 0.69 Identities = 17/67 (25%), Positives = 32/67 (47%) Frame = +3 Query: 9 DKNIRRLHNKLIHSSRNAKDTRHRIFYKNIRRLHNKLIHSSRNAKDTRHRIFYKNIRRLH 188 +K+I + ++ K +RH+ R H K HSS KD +H+ +K+ + Sbjct: 21 EKSINEENGEVSEDQSQNKHSRHKKKKHKHRSKHKKHKHSSEEDKDKKHKHKHKHKKHKR 80 Query: 189 NKLIHSS 209 ++I +S Sbjct: 81 KEVIDAS 87
>FBP1_STRPU (P10079) Fibropellin-1 precursor (Fibropellin-I) (Epidermal growth| factor-related protein 1) (UEGF-1) Length = 1064 Score = 30.8 bits (68), Expect = 0.90 Identities = 28/116 (24%), Positives = 40/116 (34%), Gaps = 28/116 (24%) Frame = -1 Query: 270 CPCCARFYGMLA---LIQCLLHSC*NVSICC------------GAAEYSCKKFYDECLLH 136 C C A + G++ + +C C N +C G +C+ DEC Sbjct: 770 CQCVAGYTGVICETDIDECASAPCQNGGVCTDTINGYICACVPGFTGSNCETNIDECASD 829 Query: 135 SC*NVSICCGAA---------EYS---CKKFYDECLLHSC*NVSICCG-AAEYSCQ 7 C N IC YS C+ D C C N + C A+Y C+ Sbjct: 830 PCLNGGICVDGVNGFVCQCPPNYSGTYCEISLDACRSMPCQNGATCVNVGADYVCE 885
>PALA_SCHPO (Q09807) pH-response regulator protein palA/rim20| Length = 701 Score = 30.4 bits (67), Expect = 1.2 Identities = 13/53 (24%), Positives = 35/53 (66%), Gaps = 6/53 (11%) Frame = +3 Query: 87 YKNIRRLHNKLIHSSRNAKDTRHRIFYKNIRRLHNKL------IHSSKNAKDT 227 Y++ + +++I+S +++++ + + FY ++ +LH ++ + +S+NAKDT Sbjct: 439 YRHCCQALDEIINSVKSSQNMKEKGFYSDVIKLHEEVSLLKVNVENSQNAKDT 491 Score = 29.3 bits (64), Expect = 2.6 Identities = 12/45 (26%), Positives = 31/45 (68%), Gaps = 6/45 (13%) Frame = +3 Query: 33 NKLIHSSRNAKDTRHRIFYKNIRRLHNKL------IHSSRNAKDT 149 +++I+S +++++ + + FY ++ +LH ++ + +S+NAKDT Sbjct: 447 DEIINSVKSSQNMKEKGFYSDVIKLHEEVSLLKVNVENSQNAKDT 491
>PRP4B_MOUSE (Q61136) Serine/threonine-protein kinase PRP4 homolog (EC 2.7.11.1)| (PRP4 pre-mRNA-processing factor 4 homolog) (Pre-mRNA protein kinase) Length = 1007 Score = 30.4 bits (67), Expect = 1.2 Identities = 21/94 (22%), Positives = 40/94 (42%) Frame = +3 Query: 9 DKNIRRLHNKLIHSSRNAKDTRHRIFYKNIRRLHNKLIHSSRNAKDTRHRIFYKNIRRLH 188 +K++ + ++ K +RH+ R H K HSS +D +H+ +K+ + Sbjct: 22 EKSVNEENGEVSEDQSQNKHSRHKKKKHKHRSKHKKHKHSSEEDRDKKHKHKHKHKKHKR 81 Query: 189 NKLIHSSKNAKDTG*GLASHKTWHNKDIKASSDL 290 ++I +S GL+ K D+ DL Sbjct: 82 KEVIEASDKE-----GLSPAKRTKLDDLALLEDL 110
>NOTC2_HUMAN (Q04721) Neurogenic locus notch homolog protein 2 precursor (Notch| 2) (hN2) [Contains: Notch 2 extracellular truncation; Notch 2 intracellular domain] Length = 2471 Score = 30.4 bits (67), Expect = 1.2 Identities = 28/118 (23%), Positives = 41/118 (34%), Gaps = 31/118 (26%) Frame = -1 Query: 270 CPCCARFYGMLA---LIQCLLHSC*NVSICCGAAEYS-------------CKKFYDECLL 139 C C F G + C C N C +++ C++ D+C Sbjct: 207 CQCPQGFTGQYCDSLYVPCAPSPCVNGGTCRQTGDFTFECNCLPGFEGSTCERNIDDCPN 266 Query: 138 HSC*NVSICC-GAAEYSCK-----------KFYDECLL--HSC*NVSICCGA-AEYSC 10 H C N +C G Y+C+ + DECLL ++C N C Y C Sbjct: 267 HRCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCANRNGGYGC 324
>CUBN_HUMAN (O60494) Cubilin precursor (Intrinsic factor-cobalamin receptor)| (Intrinsic factor-vitamin B12 receptor) (460 kDa receptor) (Intestinal intrinsic factor receptor) Length = 3623 Score = 30.0 bits (66), Expect = 1.5 Identities = 26/97 (26%), Positives = 35/97 (36%), Gaps = 12/97 (12%) Frame = -1 Query: 261 CARFYGMLALIQCLLHSC*NVSICCGAAEYSCKKFYDECLLHSC*NVSICCGAAEYSCK- 85 C+ G L L CL N G C + + CL H C N + Y CK Sbjct: 366 CSSTLGSLPLCTCLPGYTGN-----GYGPNGCVQLSNICLSHPCLNGQCIDTVSGYFCKC 420 Query: 84 ----------KFYDECLLHSC*NVSICC-GAAEYSCQ 7 + +ECL + C N C G +SC+ Sbjct: 421 DSGWTGVNCTENINECLSNPCLNGGTCVDGVDSFSCE 457
>SLIT1_HUMAN (O75093) Slit homolog 1 protein precursor (Slit-1) (Multiple| epidermal growth factor-like domains 4) Length = 1534 Score = 30.0 bits (66), Expect = 1.5 Identities = 29/117 (24%), Positives = 43/117 (36%), Gaps = 30/117 (25%) Frame = -1 Query: 270 CPCCARFYGMLALIQ---CLLHSC*NVSICC-GAAEYSCK-----------KFYDECL-- 142 C C F G + C+ H+C N +C G Y+C+ + D C Sbjct: 991 CSCPTGFEGPTCGVNTDDCVDHACANGGVCVDGVGNYTCQCPLQYEGKACEQLVDLCSPD 1050 Query: 141 LHSC*NVSICCGA------------AEYSCKKFYDECLLHSC*NVSICCGAA-EYSC 10 L+ C + + C G A +C + D+C H C N + C YSC Sbjct: 1051 LNPCQHEAQCVGTPDGPRCECMPGYAGDNCSENQDDCRDHRCQNGAQCMDEVNSYSC 1107 Score = 27.3 bits (59), Expect = 10.0 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Frame = -1 Query: 93 SCKKFYDECLLHSC*NVSICC-GAAEYSCQ 7 +C D+C+ H+C N +C G Y+CQ Sbjct: 1001 TCGVNTDDCVDHACANGGVCVDGVGNYTCQ 1030
>NOTC1_HUMAN (P46531) Neurogenic locus notch homolog protein 1 precursor (Notch 1)| (hN1) (Translocation-associated notch protein TAN-1) [Contains: Notch 1 extracellular truncation; Notch 1 intracellular domain] Length = 2556 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 12/57 (21%) Frame = -1 Query: 168 CKKFYDECLLHSC*NVSICCG-AAEYSCK-----------KFYDECLLHSC*NVSIC 34 C+ DEC C N + C YSCK + DECL H C N C Sbjct: 1143 CEDLVDECSPSPCQNGATCTDYLGGYSCKCVAGYHGVNCSEEIDECLSHPCQNGGTC 1199
>GSTP_DIRIM (P46426) Glutathione S-transferase (EC 2.5.1.18) (GST class-pi)| Length = 208 Score = 30.0 bits (66), Expect = 1.5 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Frame = +3 Query: 18 IRRLHNKL-IHSSRNAKDTRHRIFYKNIRRLHNKLIHSSRNAKDTRHRIFYKNI 176 +R L K ++ NA+ + +FY+ IR LH+K A +T+ F KNI Sbjct: 67 LRHLARKFNLNGENNAETSYVDMFYEGIRDLHSKYTRMIYEAYETQKDPFIKNI 120
>NOTC2_MOUSE (O35516) Neurogenic locus notch homolog protein 2 precursor (Notch| 2) (Motch B) [Contains: Notch 2 extracellular truncation; Notch 2 intracellular domain] Length = 2470 Score = 29.6 bits (65), Expect = 2.0 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 14/60 (23%) Frame = -1 Query: 171 SCKKFYDECLLHSC*NVSICC-GAAEYSCK-----------KFYDECLL--HSC*NVSIC 34 +C++ D+C H C N +C G Y+C+ + DECLL ++C N C Sbjct: 254 TCERNIDDCPNHKCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTC 313 Score = 28.5 bits (62), Expect = 4.5 Identities = 30/115 (26%), Positives = 37/115 (32%), Gaps = 28/115 (24%) Frame = -1 Query: 270 CPCCARFYG---MLALIQCLLHSC*NVSIC----------CGAAEYS--CKKFYDECLLH 136 C C F G + +CL C N C C A + C+ DEC Sbjct: 933 CQCHPGFIGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCTCPAGFHGVHCENNIDECTES 992 Query: 135 SC*NVSICC-GAAEYS-----------CKKFYDECLLHSC*NVSICC-GAAEYSC 10 SC N C G +S C +EC + C N C G Y C Sbjct: 993 SCFNGGTCVDGINSFSCLCPVGFTGPFCLHDINECSSNPCLNAGTCVDGLGTYRC 1047 Score = 28.1 bits (61), Expect = 5.9 Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 24/97 (24%) Frame = -1 Query: 228 QCLLHSC*NVSICCGAAEY-----------SCKKFYDECLLHSC*NVSIC---------- 112 +CL + C + + G + Y +C+ +ECL + C N C Sbjct: 721 ECLSNPCIHGNCTGGLSGYKCLCDAGWVGVNCEVDKNECLSNPCQNGGTCNNLVNGYRCT 780 Query: 111 C--GAAEYSCKKFYDECLLHSC*NVSICC-GAAEYSC 10 C G Y+C+ DEC + C N C + Y+C Sbjct: 781 CKKGFKGYNCQVNIDECASNPCLNQGTCFDDVSGYTC 817
>NOTCH_XENLA (P21783) Neurogenic locus notch protein homolog precursor (XOTCH| protein) Length = 2524 Score = 29.6 bits (65), Expect = 2.0 Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 15/72 (20%) Frame = -1 Query: 204 NVSICCGAAEYS---CKKFYDECLLHSC*NVSIC------------CGAAEYSCKKFYDE 70 N C A Y+ C++ DEC + C N + C G +C + +E Sbjct: 1126 NTHFCRCQAGYTGSYCEEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINE 1185 Query: 69 CLLHSC*NVSIC 34 CL H C N C Sbjct: 1186 CLSHPCQNGGTC 1197
>Y244_BUCAP (Q8K9R6) UPF0125 protein BUsg244| Length = 95 Score = 29.3 bits (64), Expect = 2.6 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +3 Query: 84 FYKNIRRLHNKLIHSSRNAKDTRHRIFYKNI 176 FYKN ++NKL+H + N K+ Y+N+ Sbjct: 47 FYKNNVGIYNKLVHLNENVKNGDRIEIYRNL 77
>NOTC1_BRARE (P46530) Neurogenic locus notch homolog protein 1 precursor| Length = 2437 Score = 29.3 bits (64), Expect = 2.6 Identities = 28/108 (25%), Positives = 39/108 (36%), Gaps = 21/108 (19%) Frame = -1 Query: 270 CPCCARFYGMLALIQCLLHS-----C*NVSICCGAAEYS---CKKFYDECLLHSC*NVSI 115 C AR G+ + C H+ N +C A Y+ C++ DEC + C N + Sbjct: 1099 CEVAARQQGVSVAVLCR-HAGQCVDAGNTHLCRCQAGYTGSYCQEQVDECQPNPCQNGAT 1157 Query: 114 CC------------GAAEYSCKKFYDECLLHSC*NVSICCGAAE-YSC 10 C G +C K +ECL C N C Y C Sbjct: 1158 CTDYLGGYSCECVPGYHGMNCSKEINECLSQPCQNGGTCIDLVNTYKC 1205 Score = 29.3 bits (64), Expect = 2.6 Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 17/79 (21%) Frame = -1 Query: 195 ICCGAAEYS---CKKFYDECLLHSC*NVSICC-------------GAAEYSCKKFYDECL 64 +C EY+ C++ Y CL C + C G +C+ D+C Sbjct: 202 LCRCPPEYTGPHCQRLYQPCLPSPCRSGGTCVQTSDTTHTCSCLPGFTGQTCEHNVDDCT 261 Query: 63 LHSC*NVSICC-GAAEYSC 10 H+C N C G Y+C Sbjct: 262 QHACENGGPCIDGINTYNC 280
>HIS8_BLOFL (Q7VQW9) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 356 Score = 29.3 bits (64), Expect = 2.6 Identities = 13/60 (21%), Positives = 29/60 (48%) Frame = -2 Query: 191 VVEPPNILVKNSMTSVFCIPARMYQFVVEPPNILVKNSMTSVFCIPARMYQFVVEPPNIL 12 +++ +LV + FC A + Q + E PN+++ +++ F + F + P I+ Sbjct: 171 IIQNKALLVCDEAYIDFCRHASLIQLLTEYPNLIILRTLSKAFALAGLRCGFTLANPKII 230 Score = 28.5 bits (62), Expect = 4.5 Identities = 14/52 (26%), Positives = 26/52 (50%) Frame = -2 Query: 221 FCILARMYQFVVEPPNILVKNSMTSVFCIPARMYQFVVEPPNILVKNSMTSV 66 FC A + Q + E PN+++ +++ F + F + P I+ N +T V Sbjct: 187 FCRHASLIQLLTEYPNLIILRTLSKAFALAGLRCGFTLANPKII--NLLTKV 236
>DL_DROME (P10041) Neurogenic locus protein delta precursor| Length = 833 Score = 29.3 bits (64), Expect = 2.6 Identities = 28/112 (25%), Positives = 35/112 (31%), Gaps = 25/112 (22%) Frame = -1 Query: 270 CPCCARFYGM---LALIQCLLHSC*NVSIC---------CGAAEYSCKKFYDECLLHSC* 127 C C + G L L C + C N C G + C+ D+CL H C Sbjct: 404 CECPIGYSGPNCDLQLDNCSPNPCINGGSCQPSGKCICPAGFSGTRCETNIDDCLGHQCE 463 Query: 126 NVSICC------------GAAEYSCKKFYDECLLHSC*NVSICCGA-AEYSC 10 N C G C D CL+ C N C +Y C Sbjct: 464 NGGTCIDMVNQYRCQCVPGFHGTHCSSKVDLCLIRPCANGGTCLNLNNDYQC 515
>SLIT1_MOUSE (Q80TR4) Slit homolog 1 protein precursor (Slit-1)| Length = 1531 Score = 29.3 bits (64), Expect = 2.6 Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 30/117 (25%) Frame = -1 Query: 270 CPCCARFYGMLALIQ---CLLHSC*NVSICC-GAAEYSCK-----------KFYDECL-- 142 C C + F G + C+ H+C N +C G Y+C+ + D C Sbjct: 991 CSCPSGFEGPTCGVDTDDCVKHACVNGGVCVDGVGNYTCQCPLQYTGRACEQLVDFCSPD 1050 Query: 141 LHSC*NVSICCGAAEY------------SCKKFYDECLLHSC*NVSICCGAA-EYSC 10 ++ C + + C G + +C + D+C H C N + C Y+C Sbjct: 1051 MNPCQHEAQCVGTPDGPRCECMLGYTGDNCSENQDDCKDHKCQNGAQCVDEVNSYAC 1107 Score = 28.5 bits (62), Expect = 4.5 Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 16/70 (22%) Frame = -1 Query: 168 CKKFYDECLLHSC*NVSIC---------------CGAAEYSCKKFYDECLLHSC*NVSIC 34 C+ D C + C N C G +C D+C+ H+C N +C Sbjct: 961 CEVSLDGCSSNPCGNGGTCHAQEGEDAGFTCSCPSGFEGPTCGVDTDDCVKHACVNGGVC 1020 Query: 33 C-GAAEYSCQ 7 G Y+CQ Sbjct: 1021 VDGVGNYTCQ 1030
>K0317_MOUSE (Q8CHG5) Protein KIAA0317| Length = 823 Score = 28.9 bits (63), Expect = 3.4 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = +3 Query: 18 IRRLHNKLIHSSRNAKDTRHRIFYKNIRRLHNKLIHSSRNAKDTRHRIFYKNIRRLHNKL 197 IR LH K I S +D + F + +R++H K HS K +RH + +++ N Sbjct: 426 IRSLH-KNIGGSETFQD-KVNFFQRELRQVHMKRPHSKVTLKVSRHALLESSLKATRNFS 483 Query: 198 IHS-SKN 215 I SKN Sbjct: 484 ISDWSKN 490
>K0317_HUMAN (O15033) Protein KIAA0317| Length = 823 Score = 28.9 bits (63), Expect = 3.4 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = +3 Query: 18 IRRLHNKLIHSSRNAKDTRHRIFYKNIRRLHNKLIHSSRNAKDTRHRIFYKNIRRLHNKL 197 IR LH K I S +D + F + +R++H K HS K +RH + +++ N Sbjct: 426 IRSLH-KNIGGSETFQD-KVNFFQRELRQVHMKRPHSKVTLKVSRHALLESSLKATRNFS 483 Query: 198 IHS-SKN 215 I SKN Sbjct: 484 ISDWSKN 490
>DLLD_BRARE (Q8UWJ4) Delta-like protein D precursor (DeltaD protein) (After| eight protein) Length = 717 Score = 28.9 bits (63), Expect = 3.4 Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 4/92 (4%) Frame = -1 Query: 270 CPCCARFYGM---LALIQCLLHSC*NVSICCGAAEYSCKKFYDECLLHSC*NVSICCGAA 100 C C FYG L+ + C C N C E ++ +C + G A Sbjct: 350 CTCPPGFYGRNCELSAMTCADGPCFNGGHCADNPEGG---YFCQCPM----------GYA 396 Query: 99 EYSCKKFYDECLLHSC*NVSICCGAAE-YSCQ 7 ++C+K D C + C N + C + Y CQ Sbjct: 397 GFNCEKKIDHCSSNPCSNDAQCLDLVDSYLCQ 428 Score = 28.1 bits (61), Expect = 5.9 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%) Frame = -1 Query: 243 MLALIQCLLHSC*NVSICCGAAEYSCKKFYDECLLHSC*NVSICCGAA----EYSCKKFY 76 M+A++ C++ S C G E ++F ++ + N + C G+A + CK F+ Sbjct: 5 MIAVLLCVMIS---QGFCSGVFELKLQEFLNKKGVTG--NANCCKGSAAEGHQCECKTFF 59 Query: 75 DECLLHSC*NVS 40 CL H NVS Sbjct: 60 RICLKHYQANVS 71
>HELS_METJA (Q58524) Putative ski2-type helicase (EC 3.6.1.-) [Contains:| Endonuclease PI-MjaHel (EC 3.1.-.-) (Mja Hel intein) (Mja Pep3 intein)] Length = 1195 Score = 28.9 bits (63), Expect = 3.4 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = +3 Query: 105 LHNKLIHSSRNAKDTRHRIFYKNIRRLHNKLIHSSKNAKD 224 LH K R +K H I+ K +R++ NKL +K+ K+ Sbjct: 490 LHKKYFLKCRISKGVAHYIYSKKLRKIFNKLNMLTKDNKN 529 Score = 27.7 bits (60), Expect = 7.7 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = +3 Query: 27 LHNKLIHSSRNAKDTRHRIFYKNIRRLHNKLIHSSRNAKD 146 LH K R +K H I+ K +R++ NKL +++ K+ Sbjct: 490 LHKKYFLKCRISKGVAHYIYSKKLRKIFNKLNMLTKDNKN 529
>CRUM1_MOUSE (Q8VHS2) Crumbs homolog 1 precursor| Length = 1405 Score = 28.9 bits (63), Expect = 3.4 Identities = 25/89 (28%), Positives = 32/89 (35%), Gaps = 24/89 (26%) Frame = -1 Query: 201 VSICC-GAAEYSCKKFYDECLLHSC*NVSICCG-AAEYSCKKFYDE-------------- 70 V IC G C++ DECLLH C N C Y+C +D+ Sbjct: 381 VCICQPGFTGIHCEEDVDECLLHPCLNGGTCENLPGNYACHCPFDDTSRTFYGGENCSEI 440 Query: 69 ---CLLHSC*NVSICC-----GAAEYSCQ 7 C H C N C G ++CQ Sbjct: 441 LLGCTHHQCLNNGKCIPHFQNGQHGFTCQ 469 Score = 28.5 bits (62), Expect = 4.5 Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 12/68 (17%) Frame = -1 Query: 168 CKKFYDECLLHSC*NVSICCGAAEY-----------SCKKFYDECLLHSC*NVSICCGAA 22 C+ DEC C + + G A Y +C+ D C H C N + C A Sbjct: 1173 CEINIDECFSSPCIHGNCSDGVAAYHCRCEPGYTGVNCEVDVDNCKSHQCANGATCVPEA 1232 Query: 21 E-YSCQKF 1 YSC F Sbjct: 1233 HGYSCLCF 1240
>PA21B_PIG (P00592) Phospholipase A2, major isoenzyme precursor (EC 3.1.1.4)| (Phosphatidylcholine 2-acylhydrolase) (Group IB phospholipase A2) Length = 146 Score = 28.5 bits (62), Expect = 4.5 Identities = 15/48 (31%), Positives = 21/48 (43%) Frame = -1 Query: 156 YDECLLHSC*NVSICCGAAEYSCKKFYDECLLHSC*NVSICCGAAEYS 13 Y E +SC N I C + +C+ F C N +IC A Y+ Sbjct: 91 YTESYSYSCSNTEITCNSKNNACEAFICNCDR----NAAICFSKAPYN 134
>REP1_ZYGBA (P13776) Trans-acting factor B (REP1)| Length = 357 Score = 28.5 bits (62), Expect = 4.5 Identities = 17/58 (29%), Positives = 28/58 (48%) Frame = +3 Query: 6 FDKNIRRLHNKLIHSSRNAKDTRHRIFYKNIRRLHNKLIHSSRNAKDTRHRIFYKNIR 179 F + IR LHN+L S ++ R + H K++ + KDT +FY N++ Sbjct: 275 FWEAIRALHNELRTSPTQLEECRKAAVFL---LGHKKILQTFTKQKDTARALFYINLK 329
>MT1X_HUMAN (P80297) Metallothionein-1X (MT-1X) (Metallothionein-IX) (MT-IX)| Length = 61 Score = 28.5 bits (62), Expect = 4.5 Identities = 18/61 (29%), Positives = 20/61 (32%) Frame = -1 Query: 213 SC*NVSICCGAAEYSCKKFYDECLLHSC*NVSICCGAAEYSCKKFYDECLLHSC*NVSIC 34 SC V C A CK EC SC CC C K C+ + C Sbjct: 6 SCSPVGSCACAGSCKCK----ECKCTSC--KKSCCSCCPVGCAKCAQGCICKGTSDKCSC 59 Query: 33 C 31 C Sbjct: 60 C 60
>RPC1_PLAFA (P27625) DNA-directed RNA polymerase III largest subunit (EC 2.7.7.6)| Length = 2339 Score = 28.5 bits (62), Expect = 4.5 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 4/50 (8%) Frame = +3 Query: 9 DKNIRRLHNKLIHSSRNAKDTRHRIFYKN----IRRLHNKLIHSSRNAKD 146 D N+ +HN +++ N KD H + N IR + N+LI+ + +D Sbjct: 1175 DSNMNSIHNNDSNNNNNYKDCTHNPYICNESLIIRNIMNRLIYQNIAQED 1224
>NOTC2_RAT (Q9QW30) Neurogenic locus notch homolog protein 2 precursor (Notch| 2) [Contains: Notch 2 extracellular truncation; Notch 2 intracellular domain] Length = 2471 Score = 28.1 bits (61), Expect = 5.9 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 13/67 (19%) Frame = -1 Query: 171 SCKKFYDECLLHSC*NVSIC----------C--GAAEYSCKKFYDECLLHSC*NVSICC- 31 +C+ +ECL + C N C C G Y+C+ DEC + C N C Sbjct: 753 NCEVDKNECLSNPCQNGGTCNNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLNQGTCLD 812 Query: 30 GAAEYSC 10 + Y+C Sbjct: 813 DVSGYTC 819 Score = 27.7 bits (60), Expect = 7.7 Identities = 30/115 (26%), Positives = 37/115 (32%), Gaps = 28/115 (24%) Frame = -1 Query: 270 CPCCARFYG---MLALIQCLLHSC*NVSIC----------CGAAEYS--CKKFYDECLLH 136 C C F G + +CL C N C C A + C+ DEC Sbjct: 935 CLCLPGFVGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCTCPAGFHGVHCENNIDECTES 994 Query: 135 SC*NVSICC-GAAEYS-----------CKKFYDECLLHSC*NVSICC-GAAEYSC 10 SC N C G +S C +EC + C N C G Y C Sbjct: 995 SCFNGGTCVDGINSFSCLCPVGFTGPFCLHDINECSSNPCLNSGTCVDGLGTYRC 1049 Score = 27.7 bits (60), Expect = 7.7 Identities = 25/112 (22%), Positives = 39/112 (34%), Gaps = 27/112 (24%) Frame = -1 Query: 270 CPCCARFYGMLALI---QCLLHSC*NVSIC----------C--GAAEYSCKKFYDECLLH 136 C C A + G+ + +CL + C N C C G Y+C+ DEC + Sbjct: 743 CLCDAGWVGINCEVDKNECLSNPCQNGGTCNNLVNGYRCTCKKGFKGYNCQVNIDECASN 802 Query: 135 SC*NVSICCGAAE------------YSCKKFYDECLLHSC*NVSICCGAAEY 16 C N C +C+ C + C N ++C A + Sbjct: 803 PCLNQGTCLDDVSGYTCHCMLPYTGKNCQTVLAPCSPNPCENAAVCKEAPNF 854 Score = 27.7 bits (60), Expect = 7.7 Identities = 24/93 (25%), Positives = 34/93 (36%), Gaps = 5/93 (5%) Frame = -1 Query: 270 CPCCARFYGMLA---LIQCLLHSC*NVSICCGAAEYSCKKFYDECLLHSC*NVSICCGAA 100 C C RF G + C C N C +++ EC C Sbjct: 207 CQCPQRFTGQHCDSPYVPCAPSPCVNGGTCRQTGDFT-----SECH---------CLPGF 252 Query: 99 EYS-CKKFYDECLLHSC*NVSICC-GAAEYSCQ 7 E S C++ D+C H C N +C G Y+C+ Sbjct: 253 EGSNCERNIDDCPNHKCQNGGVCVDGVNTYNCR 285
>CRUM1_HUMAN (P82279) Crumbs homolog 1 precursor| Length = 1406 Score = 28.1 bits (61), Expect = 5.9 Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 14/78 (17%) Frame = -1 Query: 201 VSIC-CGAAEYSCKKFYDECLLHSC*NVSIC-CGAAEYS-----------CKKFYDECLL 61 V IC G A C+ +DEC C N ++C G YS C DEC Sbjct: 133 VCICPAGYAGRFCEIDHDECASSPCQNGAVCQDGIDGYSCFCVPGYQGRHCDLEVDECAS 192 Query: 60 HSC*NVSICCG-AAEYSC 10 C N + C Y+C Sbjct: 193 DPCKNEATCLNEIGRYTC 210
>SEMG2_GORGO (Q5U7N3) Semenogelin-2 precursor (Semenogelin II) (SGII)| Length = 474 Score = 27.7 bits (60), Expect = 7.7 Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 1/75 (1%) Frame = +3 Query: 33 NKLIHSSRNAKDTRHRIFYKNIRRLHNKLIHSSRNAKDTRHRIFYKNIRRLHNKLIHSSK 212 ++L H S++ T+ + N + K ++ + H+I Y++ R +L H K Sbjct: 244 DRLQHGSKDIFTTQDELLVYNKNQHQTKNLNQDQEHGQKAHKISYQSSRTEERQLNHGEK 303 Query: 213 NA-KDTG*GLASHKT 254 + KD G S +T Sbjct: 304 SVQKDVSKGSISIQT 318
>MT1A_HUMAN (P04731) Metallothionein-1A (MT-1A) (Metallothionein-IA) (MT-IA)| Length = 61 Score = 27.3 bits (59), Expect = 10.0 Identities = 17/61 (27%), Positives = 19/61 (31%) Frame = -1 Query: 213 SC*NVSICCGAAEYSCKKFYDECLLHSC*NVSICCGAAEYSCKKFYDECLLHSC*NVSIC 34 SC C CK EC +SC CC SC K C+ C Sbjct: 6 SCATGGSCTCTGSCKCK----ECKCNSC--KKSCCSCCPMSCAKCAQGCICKGASEKCSC 59 Query: 33 C 31 C Sbjct: 60 C 60
>ATM_ARATH (Q9M3G7) Serine/threonine-protein kinase ATM (EC 2.7.11.1) (Ataxia| telangiectasia mutated homolog) (AtATM) Length = 3856 Score = 27.3 bits (59), Expect = 10.0 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +3 Query: 129 SRNAKDTRHRIFYKNIRRLHNKLIHSSKNAKDTG*GLASHKTWHNKD 269 SR + R ++++ LHNKLI S + +DT G + W + D Sbjct: 2363 SRRSNYLPPRFLSRSLQALHNKLIASEVSQEDTN-GETAETFWQSDD 2408 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,022,766 Number of Sequences: 219361 Number of extensions: 872212 Number of successful extensions: 2469 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 1560 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2393 length of database: 80,573,946 effective HSP length: 78 effective length of database: 63,463,788 effective search space used: 1523130912 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)