Clone Name | rbastl06d02 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | MOSA_RHIME (Q07607) Protein mosA (EC 4.1.-.-) | 27 | 8.9 | 2 | EEA1_HUMAN (Q15075) Early endosome antigen 1 (Endosome-associate... | 27 | 8.9 |
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>MOSA_RHIME (Q07607) Protein mosA (EC 4.1.-.-)| Length = 333 Score = 27.3 bits (59), Expect = 8.9 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Frame = -2 Query: 401 QYQAMKSDFAASLYKDDHAAPSHKLL---KRPKHSKC*LKRLWYMRTFVKL 258 Q + DFAA+L D P H+ L P +K L+RL MR ++L Sbjct: 218 QQACLNGDFAAALKLQDRLMPLHRALFLETNPAGAKYALQRLGRMRGDLRL 268
>EEA1_HUMAN (Q15075) Early endosome antigen 1 (Endosome-associated protein| p162) (Zinc finger FYVE domain-containing protein 2) Length = 1411 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/67 (25%), Positives = 35/67 (52%) Frame = -1 Query: 333 QAAEKAKTQQVLTEAPLVHAYIR*TWIQLKISLIDANLKKSSLLSARLGLELDIAEELRR 154 +A + K Q+ L+ L+ + +QLK+S ++ LK+ S L +LD ++ + Sbjct: 432 EAHGRLKEQRQLSSEKLMDKEQQVADLQLKLSRLEEQLKEKVTNSTELQHQLDKTKQQHQ 491 Query: 153 RKQAAEE 133 +QA ++ Sbjct: 492 EQQALQQ 498 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,179,472 Number of Sequences: 219361 Number of extensions: 696542 Number of successful extensions: 1410 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1382 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1409 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 1359926328 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)