>SYV_FUGRU (P49696) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
            (ValRS)
          Length = 1217

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = -1

Query: 358  LSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 242
            LS+K+    Y+EK P  VQE+D  KL     +L  + EA
Sbjct: 1171 LSEKISKGDYKEKVPVKVQEQDTEKLRQSQTELEKVKEA 1209

>SYV_CARHZ (Q3AF87) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 878

 Score = 32.3 bits (72), Expect = 0.29
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -1

Query: 358 LSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVI 251
           L+QK+   G+  KAP  V  ++  KLTAF+ +  V+
Sbjct: 832 LNQKLNNPGFLAKAPAEVVNKEREKLTAFYREKEVL 867

>SYV_RAT (Q04462) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
            (ValRS)
          Length = 1264

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -1

Query: 358  LSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 242
            L ++  ASGY  K P  VQE D  KL     +LR + EA
Sbjct: 1218 LQERRAASGYSAKVPLEVQEADEVKLQQTEAELRKVDEA 1256

>SYV_HUMAN (P26640) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
            (ValRS) (Protein G7a)
          Length = 1264

 Score = 30.8 bits (68), Expect = 0.84
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -1

Query: 358  LSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 242
            L ++  ASGY  K P  VQE D  KL     +LR + EA
Sbjct: 1218 LRERRAASGYPVKVPLEVQEADEAKLQQTEAELRKVDEA 1256

>SYV_MOUSE (Q9Z1Q9) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
            (ValRS) (Protein G7a)
          Length = 1263

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = -1

Query: 358  LSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 242
            L ++  AS Y  K P  VQE D  KL     +LR + EA
Sbjct: 1217 LQERRAASSYSAKVPLEVQEADEAKLQQTEAELRKVDEA 1255

>SYV_THETH (P96142) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 862

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 352 QKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 242
           +K+ + G+REKAP  V E +  +L    EQ   I EA
Sbjct: 821 RKLASPGFREKAPKEVVEAEEARLKENLEQAERIREA 857

>SYV_THET8 (Q5SJ45) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 862

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 352 QKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 242
           +K+ + G+REKAP  V E +  +L    EQ   I EA
Sbjct: 821 RKLASPGFREKAPKEVVEAEEARLKENLEQAERIREA 857

>SYV_THET2 (Q72JG7) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 862

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -1

Query: 352 QKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEA 242
           +K+ + G+REKAP  V E +  +L    EQ   I EA
Sbjct: 821 RKLASPGFREKAPKEVVEAEEARLRENLEQAERIREA 857

>SYV_PELCD (Q3A253) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 899

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = -1

Query: 355 SQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAGKKLDA 224
           S+K+    +  KAP +V E+D +KL    E+L ++ +  +KL A
Sbjct: 854 SKKLSNESFLAKAPAAVLEKDRQKLADAEEKLSILKQGLEKLAA 897

>SYV_ARATH (P93736) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
            (ValRS)
          Length = 1108

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = -1

Query: 358  LSQKMEASGYREKAPPSVQEEDMRKLTAFFEQLRVIGEAGKKLDA 224
            L + M  S Y EK P +++E++  KL    ++     +   +L A
Sbjct: 1056 LQKMMSVSTYEEKVPANIKEDNANKLAKILQEFDFFEKESARLAA 1100

>CD2AP_HUMAN (Q9Y5K6) CD2-associated protein (Cas ligand with multiple SH3|
           domains) (Adapter protein CMS)
          Length = 639

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
 Frame = +2

Query: 131 PQKKGAVSTSKQKCQ*VPI---ETESRLKSTARLRI*FLPSLTDDPQLLEKGGELPHVLL 301
           P+K   + +   K Q V I   +TE ++K+    R  F    T++ +L  K GE+ H++ 
Sbjct: 241 PEKPLILQSLGPKTQSVEITKTDTEGKIKAKEYCRTLFAYEGTNEDELTFKEGEIIHLIS 300

Query: 302 LDTG 313
            +TG
Sbjct: 301 KETG 304

>UBIE_BRUME (Q8YDE4) Ubiquinone/menaquinone biosynthesis methyltransferase ubiE|
           (EC 2.1.1.-)
          Length = 269

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +2

Query: 260 QLLEKGGELPHVLLLDTGGSLFSVTGRFHLLRQGML 367
           +++E  G   HV +LD  GS+  V GR   +++G++
Sbjct: 98  RIVEASGRQAHVTILDINGSMLGV-GRERAIKKGLI 132

>FAEB_NEUCR (Q9HGR3) Feruloyl esterase B precursor (EC 3.1.1.73) (Ferulic acid|
           esterase B) (FAEB)
          Length = 292

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
 Frame = +1

Query: 43  NIIYKRKAI--VRNWSFIVPFEFSINVTSPPS 132
           N++Y R A+  ++ WS ++  EFS NV+  PS
Sbjct: 220 NLVYPRCAMEALKQWSNVLGVEFSRNVSGVPS 251

>POLG_BVDVC (Q96662) Genome polyprotein [Contains: N-terminal protease (EC|
            3.4.22.-) (N-pro) (Autoprotease p20); Capsid protein C;
            E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1
            (gp33); Envelope glycoprotein E2 (gp55); p7;
            Nonstructural protein 2
          Length = 3907

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 289  SCPPLGHWGEPFLCNRTLPSSETGH 363
            +CP  G  G+P +C  TL   E  H
Sbjct: 1508 NCPKCGRHGKPIICGMTLADFEERH 1532

>GATD_METAC (Q8TR66) Glutamyl-tRNA(Gln) amidotransferase subunit D (EC 6.3.5.-)|
           (Glu-ADT subunit D)
          Length = 424

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +2

Query: 248 TDDPQLLEKGGELPHVLLLDTGGSLFS 328
           T++ +L E G +LP + +L TGG++ S
Sbjct: 71  TNEEELPEPGKKLPKIAILSTGGTIAS 97


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,557,569
Number of Sequences: 219361
Number of extensions: 1012234
Number of successful extensions: 2771
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2771
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)