ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl06c11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY109108.1| Zea mays PCO116815 mRNA sequence 68 2e-08
2ref|XM_469360.1| Oryza sativa (japonica cultivar-group), mRNA 56 8e-05
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 56 8e-05
4gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genom... 56 8e-05
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 56 8e-05
6gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genom... 56 8e-05
7dbj|AK121157.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 8e-05
8gb|AY112223.1| Zea mays CL3071_1 mRNA sequence 52 0.001
9gb|AC153930.2| Mus musculus 10 BAC RP24-461H14 (Roswell Park Can... 46 0.080
10gb|BT017806.1| Zea mays clone EL01N0506F04.c mRNA sequence 44 0.32
11gb|AC146506.1| Solanum demissum chromosome 5 BAC PGEC989P08 geno... 44 0.32
12gb|AY730338.1| Solanum tuberosum strain P6/210 clone BAC BA47f2,... 42 1.2
13ref|XM_537383.2| PREDICTED: Canis familiaris similar to RING fin... 42 1.2
14gb|DQ393814.1| Saccharomyces cerevisiae isolate UCD935 methionin... 42 1.2
15gb|DQ393813.1| Saccharomyces cerevisiae isolate UCD934 methionin... 42 1.2
16gb|DQ393812.1| Saccharomyces cerevisiae isolate UCD940 methionin... 42 1.2
17gb|DQ393811.1| Saccharomyces cerevisiae isolate UCD939 methionin... 42 1.2
18gb|DQ393810.1| Saccharomyces cerevisiae isolate UCD932 methionin... 42 1.2
19dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
20gb|U18839.1|SCE9747 Saccharomyces cerevisiae chromosome V cosmid... 42 1.2
21dbj|AK188858.1| Mus musculus cDNA, clone:Y0G0146L11, strand:plus... 42 1.2
22dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
23dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
24dbj|AP005492.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
25gb|DQ331679.1| Synthetic construct Saccharomyces cerevisiae clon... 42 1.2
26gb|U32508.1|SCU32508 Saccharomyces cerevisiae N5-methyltetrahydr... 42 1.2
27gb|U15099.1|SCU15099 Saccharomyces cerevisiae cobalamin-independ... 42 1.2
28emb|AL670175.12| Mouse DNA sequence from clone RP23-309K20 on ch... 42 1.2
29gb|AC113122.9| Mus musculus chromosome 8, clone RP23-349P4, comp... 40 4.9
30gb|AC125339.4| Mus musculus BAC clone RP24-356P17 from chromosom... 40 4.9
31emb|Z95310.1|CEH40L08 Caenorhabditis elegans Fosmid H40L08, comp... 40 4.9
32emb|AL590807.13| Human DNA sequence from clone RP11-325L2 on chr... 40 4.9
33emb|AL683828.8| Mouse DNA sequence from clone RP23-340H1 on chro... 40 4.9
34emb|AL845501.9| Mouse DNA sequence from clone RP23-194C12 on chr... 40 4.9
35gb|AC105426.4| Homo sapiens BAC clone RP11-794N18 from 4, comple... 40 4.9
36ref|NM_079456.2| Drosophila melanogaster Soluble NSF attachment ... 40 4.9
37gb|AC009839.10| Drosophila melanogaster 3L BAC RP98-16G9 (Roswel... 40 4.9
38gb|AC093260.2| Homo sapiens chromosome 5 clone RP11-237B16, comp... 40 4.9
39gb|AC138310.3| Mus musculus BAC clone RP23-205H21 from chromosom... 40 4.9
40gb|AC083783.8| Homo sapiens chromosome 17, clone RP11-462C21, co... 40 4.9
41gb|AC092960.3| Homo sapiens 3 BAC RP11-393B14 (Roswell Park Canc... 40 4.9
42gb|AC113368.3| Homo sapiens chromosome 5 clone RP11-116B13, comp... 40 4.9
43ref|XM_228548.3| PREDICTED: Rattus norvegicus similar to hypothe... 40 4.9
44gb|AY069477.1| Drosophila melanogaster LD21601 full insert cDNA 40 4.9
45emb|AL583742.2|CNS07EFV Human chromosome 14 DNA sequence BAC R-3... 40 4.9
46gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71... 40 4.9
47gb|AC005291.1|AC005291 Homo sapiens chromosome 17, clone hRPK.40... 40 4.9
48gb|U09374.1|DMU09374 Drosophila melanogaster soluble NSF attachm... 40 4.9
49emb|AL691423.14| Mouse DNA sequence from clone RP23-21D3 on chro... 40 4.9
50emb|AL589870.30| Mouse DNA sequence from clone RP23-118A2 on chr... 40 4.9 
>gb|AY109108.1| Zea mays PCO116815 mRNA sequence
          Length = 1041

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                       
Query: 228 tctagtttcttcccagcctcaccgatgacccgcagttgctcgaaaaaggcggtgagcttc 287
           |||| ||||||| |||| |||| |||||||   |||||||| || || ||||||||||||
Sbjct: 801 tctaatttcttctcagcttcactgatgacctctagttgctccaacaaagcggtgagcttc 742

                         
Query: 288 ctcatgtcctcctc 301
           ||||||||||||||
Sbjct: 741 ctcatgtcctcctc 728
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>ref|XM_469360.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3534

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                        
Query: 279  gtgagcttcctcatgtcctcctcttggacactggggggagccttttctctgtaaccggac 338
            ||||| || |||||||||||||| |||||| |  | |||||||| ||| ||||||| || 
Sbjct: 3092 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 3033

                                
Query: 339  gcttccatcttctgagacag 358
            |||||||| ||||| |||||
Sbjct: 3032 gcttccattttctgtgacag 3013
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                            
Query: 279      gtgagcttcctcatgtcctcctcttggacactggggggagccttttctctgtaaccggac 338
                ||||| || |||||||||||||| |||||| |  | |||||||| ||| ||||||| || 
Sbjct: 27542742 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 27542683

                                    
Query: 339      gcttccatcttctgagacag 358
                |||||||| ||||| |||||
Sbjct: 27542682 gcttccattttctgtgacag 27542663
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>gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genomic sequence, complete
             sequence
          Length = 27470

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 67/80 (83%)
 Strand = Plus / Plus

                                                                         
Query: 279   gtgagcttcctcatgtcctcctcttggacactggggggagccttttctctgtaaccggac 338
             ||||| || |||||||||||||| |||||| |  | |||||||| ||| ||||||| || 
Sbjct: 20032 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 20091

                                 
Query: 339   gcttccatcttctgagacag 358
             |||||||| ||||| |||||
Sbjct: 20092 gcttccattttctgtgacag 20111
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                            
Query: 279      gtgagcttcctcatgtcctcctcttggacactggggggagccttttctctgtaaccggac 338
                ||||| || |||||||||||||| |||||| |  | |||||||| ||| ||||||| || 
Sbjct: 27634065 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 27634006

                                    
Query: 339      gcttccatcttctgagacag 358
                |||||||| ||||| |||||
Sbjct: 27634005 gcttccattttctgtgacag 27633986
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>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence,
            complete sequence
          Length = 123406

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 67/80 (83%)
 Strand = Plus / Plus

                                                                        
Query: 279  gtgagcttcctcatgtcctcctcttggacactggggggagccttttctctgtaaccggac 338
            ||||| || |||||||||||||| |||||| |  | |||||||| ||| ||||||| || 
Sbjct: 7772 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 7831

                                
Query: 339  gcttccatcttctgagacag 358
            |||||||| ||||| |||||
Sbjct: 7832 gcttccattttctgtgacag 7851
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>dbj|AK121157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079F18, full
            insert sequence
          Length = 3587

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                        
Query: 279  gtgagcttcctcatgtcctcctcttggacactggggggagccttttctctgtaaccggac 338
            ||||| || |||||||||||||| |||||| |  | |||||||| ||| ||||||| || 
Sbjct: 3304 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaaccagaa 3245

                                
Query: 339  gcttccatcttctgagacag 358
            |||||||| ||||| |||||
Sbjct: 3244 gcttccattttctgtgacag 3225
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>gb|AY112223.1| Zea mays CL3071_1 mRNA sequence
          Length = 1082

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                       
Query: 228 tctagtttcttcccagcctcaccgatgacccgcagttgctcgaaaaaggcggtgagcttc 287
           |||| ||||||| |||| |||| |||||||   ||||| || || || ||||||||||| 
Sbjct: 446 tctaatttcttctcagcttcactgatgacctctagttgttccaacaaagcggtgagcttt 505

                         
Query: 288 ctcatgtcctcctc 301
           ||||||||||||||
Sbjct: 506 ctcatgtcctcctc 519
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>gb|AC153930.2| Mus musculus 10 BAC RP24-461H14 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 186915

 Score = 46.1 bits (23), Expect = 0.080
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 97     tttgaattttctataaatgtgacatca 123
              |||||| ||||||||||||||||||||
Sbjct: 132214 tttgaaatttctataaatgtgacatca 132188
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>gb|BT017806.1| Zea mays clone EL01N0506F04.c mRNA sequence
          Length = 1244

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                       
Query: 228 tctagtttcttcccagcctcaccgatgacccgcagttgctcgaaaaaggcggtgagcttc 287
           |||| ||||||| |||| |||| |||||||   ||||| || || || |||| |||||| 
Sbjct: 953 tctaatttcttctcagcttcactgatgacctctagttgttccaacaaagcggggagcttt 894

                         
Query: 288 ctcatgtcctcctc 301
           ||||||||||||||
Sbjct: 893 ctcatgtcctcctc 880
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>gb|AC146506.1| Solanum demissum chromosome 5 BAC PGEC989P08 genomic sequence, complete
             sequence
          Length = 121915

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 95    catttgaattttctataaatgt 116
             ||||||||||||||||||||||
Sbjct: 75708 catttgaattttctataaatgt 75687
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>gb|AY730338.1| Solanum tuberosum strain P6/210 clone BAC BA47f2, complete sequence
          Length = 81567

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 96    atttgaattttctataaatgt 116
             |||||||||||||||||||||
Sbjct: 74176 atttgaattttctataaatgt 74196
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>ref|XM_537383.2| PREDICTED: Canis familiaris similar to RING finger protein 31 (Zinc
            in-between-RING-finger ubiquitin-associated domain
            protein) (LOC480259), mRNA
          Length = 3490

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 244  cctcaccgatgacccgcagttgctc 268
            ||||||||||||| |||||||||||
Sbjct: 2442 cctcaccgatgacacgcagttgctc 2466
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>gb|DQ393814.1| Saccharomyces cerevisiae isolate UCD935 methionine synthase (MET6)
            gene, complete cds
          Length = 2862

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 227  atctagtttcttcccagcctc 247
            |||||||||||||||||||||
Sbjct: 2803 atctagtttcttcccagcctc 2783
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>gb|DQ393813.1| Saccharomyces cerevisiae isolate UCD934 methionine synthase (MET6)
            gene, complete cds
          Length = 2862

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 227  atctagtttcttcccagcctc 247
            |||||||||||||||||||||
Sbjct: 2803 atctagtttcttcccagcctc 2783
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>gb|DQ393812.1| Saccharomyces cerevisiae isolate UCD940 methionine synthase (MET6)
            gene, complete cds
          Length = 2862

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 227  atctagtttcttcccagcctc 247
            |||||||||||||||||||||
Sbjct: 2803 atctagtttcttcccagcctc 2783
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>gb|DQ393811.1| Saccharomyces cerevisiae isolate UCD939 methionine synthase (MET6)
            gene, complete cds
          Length = 2862

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 227  atctagtttcttcccagcctc 247
            |||||||||||||||||||||
Sbjct: 2803 atctagtttcttcccagcctc 2783
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>gb|DQ393810.1| Saccharomyces cerevisiae isolate UCD932 methionine synthase (MET6)
            gene, complete cds
          Length = 2862

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 227  atctagtttcttcccagcctc 247
            |||||||||||||||||||||
Sbjct: 2803 atctagtttcttcccagcctc 2783
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 31       cactcacagatcaacatcatt 51
                |||||||||||||||||||||
Sbjct: 18717892 cactcacagatcaacatcatt 18717872



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 150     tatcaacttccaaacaaaaat 170
               |||||||||||||||||||||
Sbjct: 9829802 tatcaacttccaaacaaaaat 9829822
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>gb|U18839.1|SCE9747 Saccharomyces cerevisiae chromosome V cosmids 9747, 8198, 9781, and
             lambda clones 3612 and 6052
          Length = 64797

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 227   atctagtttcttcccagcctc 247
             |||||||||||||||||||||
Sbjct: 29906 atctagtttcttcccagcctc 29926
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>dbj|AK188858.1| Mus musculus cDNA, clone:Y0G0146L11, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000041059, based on BLAT search
          Length = 242

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 308 actggggggagccttttctct 328
           |||||||||||||||||||||
Sbjct: 105 actggggggagccttttctct 125
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>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0456E06
          Length = 164353

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 150    tatcaacttccaaacaaaaat 170
              |||||||||||||||||||||
Sbjct: 120044 tatcaacttccaaacaaaaat 120064
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>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0063H02
          Length = 152326

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 150   tatcaacttccaaacaaaaat 170
             |||||||||||||||||||||
Sbjct: 26437 tatcaacttccaaacaaaaat 26457
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>dbj|AP005492.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0077L03
          Length = 171177

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 31    cactcacagatcaacatcatt 51
             |||||||||||||||||||||
Sbjct: 43643 cactcacagatcaacatcatt 43623
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>gb|DQ331679.1| Synthetic construct Saccharomyces cerevisiae clone FLH202663.01X MET6
            gene, complete sequence
          Length = 2304

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 227  atctagtttcttcccagcctc 247
            |||||||||||||||||||||
Sbjct: 2245 atctagtttcttcccagcctc 2225
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>gb|U32508.1|SCU32508 Saccharomyces cerevisiae N5-methyltetrahydrofolate homocysteine
            methyltransferase (MET6) gene and aspartyl protease gene,
            complete cds
          Length = 5163

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 227  atctagtttcttcccagcctc 247
            |||||||||||||||||||||
Sbjct: 4792 atctagtttcttcccagcctc 4772
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>gb|U15099.1|SCU15099 Saccharomyces cerevisiae cobalamin-independent methionine synthase
            (MET6) gene, complete cds
          Length = 2986

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 227  atctagtttcttcccagcctc 247
            |||||||||||||||||||||
Sbjct: 2766 atctagtttcttcccagcctc 2746
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>emb|AL670175.12| Mouse DNA sequence from clone RP23-309K20 on chromosome 4, complete
              sequence
          Length = 168158

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 112    aatgtgacatcaccaccatcc 132
              |||||||||||||||||||||
Sbjct: 140982 aatgtgacatcaccaccatcc 141002
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>gb|AC113122.9| Mus musculus chromosome 8, clone RP23-349P4, complete sequence
          Length = 203728

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    ccatttgaattttctataaa 113
             ||||||||||||||||||||
Sbjct: 23208 ccatttgaattttctataaa 23189
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>gb|AC125339.4| Mus musculus BAC clone RP24-356P17 from chromosome 17, complete
             sequence
          Length = 156282

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   aacttccaaacaaaaatgcc 173
             ||||||||||||||||||||
Sbjct: 16747 aacttccaaacaaaaatgcc 16766
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>emb|Z95310.1|CEH40L08 Caenorhabditis elegans Fosmid H40L08, complete sequence
          Length = 15122

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 154  aacttccaaacaaaaatgcc 173
            ||||||||||||||||||||
Sbjct: 3649 aacttccaaacaaaaatgcc 3668
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>emb|AL590807.13| Human DNA sequence from clone RP11-325L2 on chromosome 13 Contains an
              ADP-ribosylation factor pseudogene, complete sequence
          Length = 178914

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 227    atctagtttcttcccagcctcacc 250
              |||||||||||||||| |||||||
Sbjct: 105167 atctagtttcttcccatcctcacc 105144
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>emb|AL683828.8| Mouse DNA sequence from clone RP23-340H1 on chromosome 4 Contains the
             3' end of the Col27a1 gene for procollagen type XXVII
             alpha 1, the Orm1, Orm2 and Orm3 genes for orosomucoid 1,
             2 and 3, an orosomucoid pseudogene, the gene for a novel
             protein similar to human AT-hook protein AKNA, gene
             4933437N03Rik, the Whrn gene for whirlin and two CpG
             islands, complete sequence
          Length = 214370

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 281   gagcttcctcatgtcctcct 300
             ||||||||||||||||||||
Sbjct: 31754 gagcttcctcatgtcctcct 31735
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>emb|AL845501.9| Mouse DNA sequence from clone RP23-194C12 on chromosome 4 Contains a
             ribosomal protein S18 (Rps18) pseudogene, complete
             sequence
          Length = 156572

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 341   ttccatcttctgagacaggg 360
             ||||||||||||||||||||
Sbjct: 31116 ttccatcttctgagacaggg 31135
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>gb|AC105426.4| Homo sapiens BAC clone RP11-794N18 from 4, complete sequence
          Length = 55775

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 283   gcttcctcatgtcctcctct 302
             ||||||||||||||||||||
Sbjct: 23507 gcttcctcatgtcctcctct 23526
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>ref|NM_079456.2| Drosophila melanogaster Soluble NSF attachment protein CG6625-RA
            (Snap), mRNA
          Length = 2069

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 100  gaattttctataaatgtgac 119
            ||||||||||||||||||||
Sbjct: 1762 gaattttctataaatgtgac 1743
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>gb|AC009839.10| Drosophila melanogaster 3L BAC RP98-16G9 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 185918

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 100    gaattttctataaatgtgac 119
              ||||||||||||||||||||
Sbjct: 106242 gaattttctataaatgtgac 106223
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>gb|AC093260.2| Homo sapiens chromosome 5 clone RP11-237B16, complete sequence
          Length = 168521

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 102  attttctataaatgtgacat 121
            ||||||||||||||||||||
Sbjct: 1961 attttctataaatgtgacat 1980
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>gb|AC138310.3| Mus musculus BAC clone RP23-205H21 from chromosome 17, complete sequence
          Length = 195483

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    aacttccaaacaaaaatgcc 173
              ||||||||||||||||||||
Sbjct: 160602 aacttccaaacaaaaatgcc 160621
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>gb|AC083783.8| Homo sapiens chromosome 17, clone RP11-462C21, complete sequence
          Length = 143516

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     tgaattttctataaatgtga 118
              ||||||||||||||||||||
Sbjct: 121095 tgaattttctataaatgtga 121076
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>gb|AC092960.3| Homo sapiens 3 BAC RP11-393B14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172507

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     catttgaattttctataaat 114
              ||||||||||||||||||||
Sbjct: 161099 catttgaattttctataaat 161080
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>gb|AC113368.3| Homo sapiens chromosome 5 clone RP11-116B13, complete sequence
          Length = 155354

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   attttctataaatgtgacat 121
             ||||||||||||||||||||
Sbjct: 23774 attttctataaatgtgacat 23793
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>ref|XM_228548.3| PREDICTED: Rattus norvegicus similar to hypothetical protein
            6430402L03 (LOC302412), mRNA
          Length = 1632

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 284  cttcctcatgtcctcctctt 303
            ||||||||||||||||||||
Sbjct: 1005 cttcctcatgtcctcctctt 986
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>gb|AY069477.1| Drosophila melanogaster LD21601 full insert cDNA
          Length = 2054

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 100  gaattttctataaatgtgac 119
            ||||||||||||||||||||
Sbjct: 1730 gaattttctataaatgtgac 1711
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>emb|AL583742.2|CNS07EFV Human chromosome 14 DNA sequence BAC R-318A9 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 175584

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   atgtgacatcaccaccatcc 132
             ||||||||||||||||||||
Sbjct: 71007 atgtgacatcaccaccatcc 71026
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>gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71 of 83 of the complete
              sequence
          Length = 299903

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 100    gaattttctataaatgtgac 119
              ||||||||||||||||||||
Sbjct: 288396 gaattttctataaatgtgac 288377
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>gb|AC005291.1|AC005291 Homo sapiens chromosome 17, clone hRPK.401_O_9, complete sequence
          Length = 198582

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    tgaattttctataaatgtga 118
             ||||||||||||||||||||
Sbjct: 63377 tgaattttctataaatgtga 63358
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>gb|U09374.1|DMU09374 Drosophila melanogaster soluble NSF attachment protein mRNA, complete
            cds
          Length = 2038

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 100  gaattttctataaatgtgac 119
            ||||||||||||||||||||
Sbjct: 1718 gaattttctataaatgtgac 1699
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>emb|AL691423.14| Mouse DNA sequence from clone RP23-21D3 on chromosome 2, complete
              sequence
          Length = 216415

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     tttgaattttctataaatgt 116
              ||||||||||||||||||||
Sbjct: 104442 tttgaattttctataaatgt 104461
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>emb|AL589870.30| Mouse DNA sequence from clone RP23-118A2 on chromosome 2, complete
              sequence
          Length = 202686

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     gtggacactcaacactcaca 38
              ||||||||||||||||||||
Sbjct: 191713 gtggacactcaacactcaca 191732


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,894,261
Number of Sequences: 3902068
Number of extensions: 3894261
Number of successful extensions: 115190
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115025
Number of HSP's gapped (non-prelim): 165
length of query: 370
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 348
effective length of database: 17,147,199,772
effective search space: 5967225520656
effective search space used: 5967225520656
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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