ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl06c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC106779.3| Homo sapiens chromosome 16 clone RP11-343H19, com... 44 0.065
2gb|DQ011272.1| Oikopleura dioica eyes absent (eya) gene, complet... 40 1.0
3emb|BX005379.9| Zebrafish DNA sequence from clone DKEY-184P9 in ... 40 1.0
4emb|BX649331.16| Zebrafish DNA sequence from clone DKEY-12N3 in ... 40 1.0
5gb|AC009260.13| Homo sapiens 12 BAC RP11-435A10 (Roswell Park Ca... 40 1.0
6emb|BX465211.8| Zebrafish DNA sequence from clone CH211-142D23 i... 40 1.0
7gb|AC079283.4|AC079283 Arabidopsis thaliana chromosome 1 BAC F7O... 40 1.0
8ref|NM_192538.1| Oryza sativa (japonica cultivar-group), predic... 38 4.0
9gb|AC165351.2| Mus musculus BAC clone RP23-197K16 from chromosom... 38 4.0
10gb|AC133179.3| Mus musculus BAC clone RP24-134P14 from chromosom... 38 4.0
11gb|AC139240.4| Mus musculus BAC clone RP24-128J14 from chromosom... 38 4.0
12gb|AC124499.3| Mus musculus BAC clone RP24-68G23 from chromosome... 38 4.0
13gb|AC132351.3| Mus musculus BAC clone RP24-95F24 from chromosome... 38 4.0
14emb|CR727213.2|CNS0GO2B Tetraodon nigroviridis full-length cDNA 38 4.0
15emb|CR726391.3|CNS0GNFH Tetraodon nigroviridis full-length cDNA 38 4.0
16emb|CR714602.2|CNS0GEC6 Tetraodon nigroviridis full-length cDNA 38 4.0
17emb|CR711307.2|CNS0GBSN Tetraodon nigroviridis full-length cDNA 38 4.0
18emb|CR710778.2|CNS0GBDY Tetraodon nigroviridis full-length cDNA 38 4.0
19emb|CR710049.2|CNS0GATP Tetraodon nigroviridis full-length cDNA 38 4.0
20emb|CR708913.2|CNS0G9Y5 Tetraodon nigroviridis full-length cDNA 38 4.0
21emb|CR709192.3|CNS0GA5W Tetraodon nigroviridis full-length cDNA 38 4.0
22emb|CR707229.2|CNS0G8ND Tetraodon nigroviridis full-length cDNA 38 4.0
23emb|CR705274.2|CNS0G752 Tetraodon nigroviridis full-length cDNA 38 4.0
24emb|CR705204.2|CNS0G734 Tetraodon nigroviridis full-length cDNA 38 4.0
25emb|Z93928.1|HS127B14 Human DNA sequence from clone RP1-127B14 o... 38 4.0
26gb|DQ011581.1| Plasmodium cynomolgi Berok reticulocyte binding p... 38 4.0
27gb|AC160132.2| Mus musculus BAC clone RP23-197I12 from chromosom... 38 4.0
28gb|DP000036.1| Papio anubis target 106 genomic scaffold 38 4.0
29gb|DP000048.1| Cercopithecus aethiops target 106 genomic scaffold 38 4.0
30gb|AC144534.4| Homo sapiens 3 BAC RP11-759J11 (Roswell Park Canc... 38 4.0
31gb|AF275720.1|AF275720 Neottopteris nidus FtsZ (ftsZ) mRNA, part... 38 4.0
32emb|BX666065.10| Zebrafish DNA sequence from clone DKEY-16B10 in... 38 4.0
33dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 4.0
34emb|BX842294.1|CNS0A1M4 Arabidopsis thaliana Full-length cDNA Co... 38 4.0
35gb|AC157586.2| Mus musculus BAC clone RP24-406D13 from chromosom... 38 4.0
36dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic D... 38 4.0
37dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic D... 38 4.0
38dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic D... 38 4.0
39dbj|AB023044.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 38 4.0
40gb|AC007505.4|AC007505 Arabidopsis thaliana chromosome I BAC F28... 38 4.0
41gb|AC136187.2| Homo sapiens 12 BAC RP11-434D23 (Roswell Park Can... 38 4.0
42gb|AC007625.2|AC007625 Genomic sequence of Homo sapiens clone 23... 38 4.0
43emb|Z77655.1|CEC56A3 Caenorhabditis elegans Cosmid C56A3, comple... 38 4.0
44emb|Z68227.1|CEF49C12 Caenorhabditis elegans Cosmid F49C12, comp... 38 4.0
45dbj|AB053262.1| Arabidopsis thaliana gene for embryonic flower 2... 38 4.0
46gb|L33258.1|AMTTCRB11V Ambystoma mexicanum (clone 55) rearranged... 38 4.0 
>gb|AC106779.3| Homo sapiens chromosome 16 clone RP11-343H19, complete sequence
          Length = 158297

 Score = 44.1 bits (22), Expect = 0.065
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 46    atgaaaagtggcagttttcttg 67
             ||||||||||||||||||||||
Sbjct: 92561 atgaaaagtggcagttttcttg 92540
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>gb|DQ011272.1| Oikopleura dioica eyes absent (eya) gene, complete cds
          Length = 43001

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    gcagttttcttgaattttga 75
             ||||||||||||||||||||
Sbjct: 35618 gcagttttcttgaattttga 35599
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>emb|BX005379.9| Zebrafish DNA sequence from clone DKEY-184P9 in linkage group 21,
              complete sequence
          Length = 185814

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 40     taaatcatgaaaagtggcagtttt 63
              |||||||| |||||||||||||||
Sbjct: 154062 taaatcataaaaagtggcagtttt 154085
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>emb|BX649331.16| Zebrafish DNA sequence from clone DKEY-12N3 in linkage group 11,
             complete sequence
          Length = 252675

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    cttgaattttgacacacaca 83
             ||||||||||||||||||||
Sbjct: 38706 cttgaattttgacacacaca 38725
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>gb|AC009260.13| Homo sapiens 12 BAC RP11-435A10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 99727

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 21    acagccttggatttagtaataaat 44
             |||||||||||||| |||||||||
Sbjct: 11641 acagccttggattttgtaataaat 11618
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>emb|BX465211.8| Zebrafish DNA sequence from clone CH211-142D23 in linkage group 17,
              complete sequence
          Length = 173690

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     ttagtaataaatcatgaaaa 52
              ||||||||||||||||||||
Sbjct: 121635 ttagtaataaatcatgaaaa 121616
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>gb|AC079283.4|AC079283 Arabidopsis thaliana chromosome 1 BAC F7O12 genomic sequence, complete
             sequence
          Length = 39456

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 28    tggatttagtaataaatcatgaaa 51
             ||||||||||||| ||||||||||
Sbjct: 9978  tggatttagtaatgaatcatgaaa 10001
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>ref|NM_192538.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1383

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 1   agattcaagaggctgctgc 19
           |||||||||||||||||||
Sbjct: 749 agattcaagaggctgctgc 731
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>gb|AC165351.2| Mus musculus BAC clone RP23-197K16 from chromosome 12, complete sequence
          Length = 211170

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 37     taataaatcatgaaaagtg 55
              |||||||||||||||||||
Sbjct: 171588 taataaatcatgaaaagtg 171606
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>gb|AC133179.3| Mus musculus BAC clone RP24-134P14 from chromosome 14, complete
             sequence
          Length = 160216

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 58    agttttcttgaattttgac 76
             |||||||||||||||||||
Sbjct: 28597 agttttcttgaattttgac 28615
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>gb|AC139240.4| Mus musculus BAC clone RP24-128J14 from chromosome 18, complete sequence
          Length = 173054

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 62     ttcttgaattttgacacacacaa 84
              |||| ||||||||||||||||||
Sbjct: 142342 ttctggaattttgacacacacaa 142320
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>gb|AC124499.3| Mus musculus BAC clone RP24-68G23 from chromosome 12, complete
           sequence
          Length = 209276

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 37  taataaatcatgaaaagtg 55
           |||||||||||||||||||
Sbjct: 542 taataaatcatgaaaagtg 524
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>gb|AC132351.3| Mus musculus BAC clone RP24-95F24 from chromosome 18, complete sequence
          Length = 186726

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 62     ttcttgaattttgacacacacaa 84
              |||| ||||||||||||||||||
Sbjct: 138262 ttctggaattttgacacacacaa 138284
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>emb|CR727213.2|CNS0GO2B Tetraodon nigroviridis full-length cDNA
          Length = 1038

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 48  gaaaagtggcagttttctt 66
           |||||||||||||||||||
Sbjct: 802 gaaaagtggcagttttctt 820
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>emb|CR726391.3|CNS0GNFH Tetraodon nigroviridis full-length cDNA
          Length = 782

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 48  gaaaagtggcagttttctt 66
           |||||||||||||||||||
Sbjct: 578 gaaaagtggcagttttctt 596
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>emb|CR714602.2|CNS0GEC6 Tetraodon nigroviridis full-length cDNA
          Length = 621

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 48  gaaaagtggcagttttctt 66
           |||||||||||||||||||
Sbjct: 247 gaaaagtggcagttttctt 265
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>emb|CR711307.2|CNS0GBSN Tetraodon nigroviridis full-length cDNA
          Length = 949

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 48  gaaaagtggcagttttctt 66
           |||||||||||||||||||
Sbjct: 697 gaaaagtggcagttttctt 715
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>emb|CR710778.2|CNS0GBDY Tetraodon nigroviridis full-length cDNA
          Length = 621

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 48  gaaaagtggcagttttctt 66
           |||||||||||||||||||
Sbjct: 247 gaaaagtggcagttttctt 265
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>emb|CR710049.2|CNS0GATP Tetraodon nigroviridis full-length cDNA
          Length = 586

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 48  gaaaagtggcagttttctt 66
           |||||||||||||||||||
Sbjct: 365 gaaaagtggcagttttctt 383
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>emb|CR708913.2|CNS0G9Y5 Tetraodon nigroviridis full-length cDNA
          Length = 453

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 48  gaaaagtggcagttttctt 66
           |||||||||||||||||||
Sbjct: 212 gaaaagtggcagttttctt 230
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>emb|CR709192.3|CNS0GA5W Tetraodon nigroviridis full-length cDNA
          Length = 801

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 48  gaaaagtggcagttttctt 66
           |||||||||||||||||||
Sbjct: 580 gaaaagtggcagttttctt 598
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>emb|CR707229.2|CNS0G8ND Tetraodon nigroviridis full-length cDNA
          Length = 621

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 48  gaaaagtggcagttttctt 66
           |||||||||||||||||||
Sbjct: 247 gaaaagtggcagttttctt 265
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>emb|CR705274.2|CNS0G752 Tetraodon nigroviridis full-length cDNA
          Length = 614

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 48  gaaaagtggcagttttctt 66
           |||||||||||||||||||
Sbjct: 355 gaaaagtggcagttttctt 373
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>emb|CR705204.2|CNS0G734 Tetraodon nigroviridis full-length cDNA
          Length = 617

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 48  gaaaagtggcagttttctt 66
           |||||||||||||||||||
Sbjct: 365 gaaaagtggcagttttctt 383
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>emb|Z93928.1|HS127B14 Human DNA sequence from clone RP1-127B14 on chromosome Xq22, complete
             sequence
          Length = 126263

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 35    agtaataaatcatgaaaag 53
             |||||||||||||||||||
Sbjct: 46563 agtaataaatcatgaaaag 46545
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>gb|DQ011581.1| Plasmodium cynomolgi Berok reticulocyte binding protein 1 gene,
           complete cds
          Length = 9187

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 40  taaatcatgaaaagtggca 58
           |||||||||||||||||||
Sbjct: 123 taaatcatgaaaagtggca 141
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>gb|AC160132.2| Mus musculus BAC clone RP23-197I12 from chromosome 9, complete sequence
          Length = 202786

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 37     taataaatcatgaaaagtg 55
              |||||||||||||||||||
Sbjct: 101009 taataaatcatgaaaagtg 101027
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>gb|DP000036.1| Papio anubis target 106 genomic scaffold
          Length = 492848

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 19     caacagccttggatttagt 37
              |||||||||||||||||||
Sbjct: 414108 caacagccttggatttagt 414090
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>gb|DP000048.1| Cercopithecus aethiops target 106 genomic scaffold
          Length = 583711

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 19     caacagccttggatttagt 37
              |||||||||||||||||||
Sbjct: 529316 caacagccttggatttagt 529298
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>gb|AC144534.4| Homo sapiens 3 BAC RP11-759J11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 45696

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 30    gatttagtaataaatcatg 48
             |||||||||||||||||||
Sbjct: 42655 gatttagtaataaatcatg 42673
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>gb|AF275720.1|AF275720 Neottopteris nidus FtsZ (ftsZ) mRNA, partial cds
          Length = 564

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 3   attcaagaggctgctgcaa 21
           |||||||||||||||||||
Sbjct: 193 attcaagaggctgctgcaa 211
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>emb|BX666065.10| Zebrafish DNA sequence from clone DKEY-16B10 in linkage group 14,
             complete sequence
          Length = 72728

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 64    cttgaattttgacacacac 82
             |||||||||||||||||||
Sbjct: 15304 cttgaattttgacacacac 15286
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 34       tagtaataaatcatgaaaa 52
                |||||||||||||||||||
Sbjct: 28615381 tagtaataaatcatgaaaa 28615399



 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 1        agattcaagaggctgctgc 19
                |||||||||||||||||||
Sbjct: 22811932 agattcaagaggctgctgc 22811914
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>emb|BX842294.1|CNS0A1M4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH84ZB05 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2522

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 54   tggcagttttcttgaattttgac 76
            |||||||||||||||||| ||||
Sbjct: 1321 tggcagttttcttgaattgtgac 1343
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>gb|AC157586.2| Mus musculus BAC clone RP24-406D13 from chromosome 9, complete sequence
          Length = 218664

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 37     taataaatcatgaaaagtg 55
              |||||||||||||||||||
Sbjct: 187236 taataaatcatgaaaagtg 187254
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>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0700A11
          Length = 136321

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     agattcaagaggctgctgc 19
             |||||||||||||||||||
Sbjct: 15489 agattcaagaggctgctgc 15471
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>dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0034C09
          Length = 170226

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 34     tagtaataaatcatgaaaa 52
              |||||||||||||||||||
Sbjct: 141820 tagtaataaatcatgaaaa 141838
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>dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0712E02
          Length = 158084

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      agattcaagaggctgctgc 19
              |||||||||||||||||||
Sbjct: 129321 agattcaagaggctgctgc 129303
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>dbj|AB023044.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWD22
          Length = 87180

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 54    tggcagttttcttgaattttgac 76
             |||||||||||||||||| ||||
Sbjct: 60156 tggcagttttcttgaattgtgac 60178
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>gb|AC007505.4|AC007505 Arabidopsis thaliana chromosome I BAC F28L22 genomic sequence, complete
             sequence
          Length = 134499

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 75    acacacacaagataggcct 93
             |||||||||||||||||||
Sbjct: 70401 acacacacaagataggcct 70419
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>gb|AC136187.2| Homo sapiens 12 BAC RP11-434D23 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 29501

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 66   tgaattttgacacacacaa 84
            |||||||||||||||||||
Sbjct: 3177 tgaattttgacacacacaa 3195
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>gb|AC007625.2|AC007625 Genomic sequence of Homo sapiens clone 2314F2 from chromosome 18,
             complete sequence
          Length = 174701

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 30    gatttagtaataaatcatg 48
             |||||||||||||||||||
Sbjct: 93995 gatttagtaataaatcatg 93977
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>emb|Z77655.1|CEC56A3 Caenorhabditis elegans Cosmid C56A3, complete sequence
          Length = 38744

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 60    ttttcttgaattttgacac 78
             |||||||||||||||||||
Sbjct: 18141 ttttcttgaattttgacac 18159
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>emb|Z68227.1|CEF49C12 Caenorhabditis elegans Cosmid F49C12, complete sequence
          Length = 32664

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 57    cagttttcttgaattttga 75
             |||||||||||||||||||
Sbjct: 22242 cagttttcttgaattttga 22260
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>dbj|AB053262.1| Arabidopsis thaliana gene for embryonic flower 2, complete cds
          Length = 8508

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 54   tggcagttttcttgaattttgac 76
            |||||||||||||||||| ||||
Sbjct: 5522 tggcagttttcttgaattgtgac 5544
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>gb|L33258.1|AMTTCRB11V Ambystoma mexicanum (clone 55) rearranged T-cell receptor
          beta-1.1 chain variable region mRNA, 5' end
          Length = 344

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 69 attttgacacacacaagat 87
          |||||||||||||||||||
Sbjct: 57 attttgacacacacaagat 39


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,213,149
Number of Sequences: 3902068
Number of extensions: 1213149
Number of successful extensions: 93571
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93457
Number of HSP's gapped (non-prelim): 114
length of query: 93
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 72
effective length of database: 17,151,101,840
effective search space: 1234879332480
effective search space used: 1234879332480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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