ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl06b12 |
|---|---|
| Clone Library Name | barley_pub |
>NOX3_RAT (Q672K1) NADPH oxidase 3 (EC 1.6.3.-)| Length = 568 Score = 58.5 bits (140), Expect = 4e-09 Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 2/68 (2%) Frame = -3 Query: 300 SGTRVKTHFARPNWRNVYKRIALNHREQRVGVFYCGAPVLTKELRELAQDFSRK--TNTK 127 +G + KT + RPNW +K+IA NH +GVF+CG ++K L+++ + +S Sbjct: 501 TGLKQKTFYGRPNWNEEFKQIAYNHPSSSIGVFFCGPKAMSKTLQKMCRLYSSSDPRGVH 560 Query: 126 FEFHKENF 103 F ++KENF Sbjct: 561 FYYNKENF 568
>NOX3_HUMAN (Q9HBY0) NADPH oxidase 3 (EC 1.6.3.-) (gp91phox homolog 3) (GP91-3)| (Mitogenic oxidase 2) Length = 568 Score = 57.8 bits (138), Expect = 7e-09 Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 2/68 (2%) Frame = -3 Query: 300 SGTRVKTHFARPNWRNVYKRIALNHREQRVGVFYCGAPVLTKELRELAQDFSR--KTNTK 127 +G + KT + RPNW N +K+IA NH +GVF+CG L++ L+++ +S Sbjct: 501 TGLKQKTFYGRPNWNNEFKQIAYNHPSSSIGVFFCGPKALSRTLQKMCHLYSSADPRGVH 560 Query: 126 FEFHKENF 103 F ++KE+F Sbjct: 561 FYYNKESF 568
>NOX1_RAT (Q9WV87) NADPH oxidase homolog 1 (NOX-1) (NOH-1) (NADH/NADPH| mitogenic oxidase subunit P65-MOX) (Mitogenic oxidase 1) (MOX1) Length = 563 Score = 57.4 bits (137), Expect = 9e-09 Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 2/68 (2%) Frame = -3 Query: 300 SGTRVKTHFARPNWRNVYKRIALNHREQRVGVFYCGAPVLTKELRELAQDFSR--KTNTK 127 +G + KT F RP W N + RIA H + VGVF CG P L K LR+ + +S + Sbjct: 496 TGLKQKTSFGRPMWDNEFSRIATAHPKSVVGVFLCGPPTLAKSLRKCCRRYSSLDPRKVQ 555 Query: 126 FEFHKENF 103 F F+KE F Sbjct: 556 FYFNKETF 563
>NOX3_MOUSE (Q672J9) NADPH oxidase 3 (EC 1.6.3.-)| Length = 568 Score = 57.4 bits (137), Expect = 9e-09 Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 2/68 (2%) Frame = -3 Query: 300 SGTRVKTHFARPNWRNVYKRIALNHREQRVGVFYCGAPVLTKELRELAQDFSR--KTNTK 127 +G + K + RPNW + +K+IA NH +GVF+CG+ ++K L+++ + +S Sbjct: 501 TGLKQKAFYGRPNWNDEFKQIAYNHPSSSIGVFFCGSKAMSKTLQKMCRLYSSVDPRGVH 560 Query: 126 FEFHKENF 103 F ++KENF Sbjct: 561 FYYNKENF 568
>NOX1_HUMAN (Q9Y5S8) NADPH oxidase homolog 1 (NOX-1) (NOH-1) (NADH/NADPH| mitogenic oxidase subunit P65-MOX) (Mitogenic oxidase 1) (MOX1) Length = 564 Score = 54.7 bits (130), Expect = 6e-08 Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 2/68 (2%) Frame = -3 Query: 300 SGTRVKTHFARPNWRNVYKRIALNHREQRVGVFYCGAPVLTKELRELAQDFSR--KTNTK 127 +G + KT F RP W N + IA +H + VGVF CG L K LR+ +S + Sbjct: 497 TGLKQKTSFGRPMWDNEFSTIATSHPKSVVGVFLCGPRTLAKSLRKCCHRYSSLDPRKVQ 556 Query: 126 FEFHKENF 103 F F+KENF Sbjct: 557 FYFNKENF 564
>CY24B_PIG (P52649) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 beta Length = 484 Score = 53.9 bits (128), Expect = 1e-07 Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 2/68 (2%) Frame = -3 Query: 300 SGTRVKTHFARPNWRNVYKRIALNHREQRVGVFYCGAPVLTKELRE--LAQDFSRKTNTK 127 +G + KT + RPNW N +K IA H R+GVF CG L + L + ++ S Sbjct: 417 TGLKQKTLYGRPNWDNEFKTIASQHPTTRIGVFLCGPEALAETLNKQCISNSDSSPRGVH 476 Query: 126 FEFHKENF 103 F F+KENF Sbjct: 477 FIFNKENF 484
>CY24B_HUMAN (P04839) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 569 Score = 53.9 bits (128), Expect = 1e-07 Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 2/68 (2%) Frame = -3 Query: 300 SGTRVKTHFARPNWRNVYKRIALNHREQRVGVFYCGAPVLTKEL--RELAQDFSRKTNTK 127 +G + KT + RPNW N +K IA H R+GVF CG L + L + ++ S Sbjct: 502 TGLKQKTLYGRPNWDNEFKTIASQHPNTRIGVFLCGPEALAETLSKQSISNSESGPRGVH 561 Query: 126 FEFHKENF 103 F F+KENF Sbjct: 562 FIFNKENF 569
>CY24B_MOUSE (Q61093) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 570 Score = 51.6 bits (122), Expect = 5e-07 Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 2/68 (2%) Frame = -3 Query: 300 SGTRVKTHFARPNWRNVYKRIALNHREQRVGVFYCGAPVLTKEL--RELAQDFSRKTNTK 127 +G + KT + RPNW N +K IA H +GVF CG L + L + ++ S Sbjct: 503 TGLKQKTLYGRPNWDNEFKTIASEHPNTTIGVFLCGPEALAETLSKQSISNSESGPRGVH 562 Query: 126 FEFHKENF 103 F F+KENF Sbjct: 563 FIFNKENF 570
>CY24B_BOVIN (O46522) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 570 Score = 51.6 bits (122), Expect = 5e-07 Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Frame = -3 Query: 300 SGTRVKTHFARPNWRNVYKRIALNHREQRVGVFYCGAPVLTKELRE--LAQDFSRKTNTK 127 +G + KT + RPNW N +K I H R+GVF CG L L + ++ S Sbjct: 503 TGLKQKTLYGRPNWDNEFKTIGSQHPNTRIGVFLCGPEALADTLNKQCISNSDSGPRGVH 562 Query: 126 FEFHKENF 103 F F+KENF Sbjct: 563 FIFNKENF 570
>CY24B_BISBI (Q95L74) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 570 Score = 51.6 bits (122), Expect = 5e-07 Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Frame = -3 Query: 300 SGTRVKTHFARPNWRNVYKRIALNHREQRVGVFYCGAPVLTKELRE--LAQDFSRKTNTK 127 +G + KT + RPNW N +K I H R+GVF CG L L + ++ S Sbjct: 503 TGLKQKTLYGRPNWDNEFKTIGSQHPNTRIGVFLCGPEALADTLNKQCISNSDSGPRGVH 562 Query: 126 FEFHKENF 103 F F+KENF Sbjct: 563 FIFNKENF 570
>DUOX1_CANFA (Q9MZF4) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH| thyroid oxidase 1) (Thyroid oxidase 1) Length = 1551 Score = 51.2 bits (121), Expect = 7e-07 Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Frame = -3 Query: 300 SGTRVKTHFARPNWRNVYKRIALNHREQR-VGVFYCGAPVLTKELRELAQDFSRKTNTKF 124 +G R THF RP + +K + H + R +GVF CG P +TK + + Q +R+ T F Sbjct: 1485 TGLRSITHFGRPPFEPFFKSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDRTHF 1544 Query: 123 EFHKENF 103 H ENF Sbjct: 1545 SHHYENF 1551
>DUOX1_HUMAN (Q9NRD9) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH| thyroid oxidase 1) (Thyroid oxidase 1) (Large NOX 1) (Long NOX 1) Length = 1551 Score = 49.3 bits (116), Expect = 2e-06 Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -3 Query: 300 SGTRVKTHFARPNWRNVYKRIALNHREQR-VGVFYCGAPVLTKELRELAQDFSRKTNTKF 124 +G R THF RP + + + H + R +GVF CG P +TK + + Q +R+ T F Sbjct: 1485 TGLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDRTHF 1544 Query: 123 EFHKENF 103 H ENF Sbjct: 1545 SHHYENF 1551
>DUOX1_PIG (Q8HZK3) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-)| Length = 1553 Score = 49.3 bits (116), Expect = 2e-06 Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -3 Query: 300 SGTRVKTHFARPNWRNVYKRIALNHREQR-VGVFYCGAPVLTKELRELAQDFSRKTNTKF 124 +G R THF RP + + + H + R +GVF CG P +TK + + Q +R+ T F Sbjct: 1487 TGLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDRTHF 1546 Query: 123 EFHKENF 103 H ENF Sbjct: 1547 SHHYENF 1553
>DUOX1_RAT (Q8CIY2) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-)| Length = 1551 Score = 48.5 bits (114), Expect = 4e-06 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -3 Query: 300 SGTRVKTHFARPNWRNVYKRIALNHREQR-VGVFYCGAPVLTKELRELAQDFSRKTNTKF 124 +G R THF RP + + + H + R +GVF CG P +TK + + Q +++ T F Sbjct: 1485 TGLRSVTHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINKQDRTHF 1544 Query: 123 EFHKENF 103 H ENF Sbjct: 1545 SHHYENF 1551
>DUOX2_PIG (Q8HZK2) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-)| (NADH/NADPH thyroid oxidase p138-tox) Length = 1545 Score = 48.5 bits (114), Expect = 4e-06 Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -3 Query: 300 SGTRVKTHFARPNWRNVYKRIALNHREQR-VGVFYCGAPVLTKELRELAQDFSRKTNTKF 124 +G R THF RP + + + H + R +GVF CG P +TK + + Q +R+ T F Sbjct: 1479 TGLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKTCQLINRQDQTHF 1538 Query: 123 EFHKENF 103 H ENF Sbjct: 1539 VHHYENF 1545
>DUOX2_HUMAN (Q9NRD8) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH| oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2) (Thyroid oxidase 2) (NADH/NADPH thyroid oxidase p138-tox) (p138 thyroid oxidase) (Large NOX 2) (Long NOX 2) Length = 1548 Score = 46.2 bits (108), Expect = 2e-05 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = -3 Query: 300 SGTRVKTHFARPNWRNVYKRIALNHREQR-VGVFYCGAPVLTKELRELAQDFSRKTNTKF 124 +G R THF RP + + + H + R +GVF CG P +TK + + Q +R+ F Sbjct: 1482 TGLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLVNRQDRAHF 1541 Query: 123 EFHKENF 103 H ENF Sbjct: 1542 MHHYENF 1548
>NOX5_HUMAN (Q96PH1) NADPH oxidase 5 (EC 1.6.3.-)| Length = 765 Score = 45.1 bits (105), Expect = 5e-05 Identities = 22/66 (33%), Positives = 38/66 (57%) Frame = -3 Query: 300 SGTRVKTHFARPNWRNVYKRIALNHREQRVGVFYCGAPVLTKELRELAQDFSRKTNTKFE 121 +G + +T RP+W V++++A ++ +V VF+CG+P L K L+ + F F Sbjct: 707 TGLQTRTQPGRPDWSKVFQKVAAE-KKGKVQVFFCGSPALAKVLKGHCEKFG------FR 759 Query: 120 FHKENF 103 F +ENF Sbjct: 760 FFQENF 765
>DUOX2_RAT (Q9ES45) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-)| (NADH/NADPH thyroid oxidase THOX2) (Thyroid oxidase 2) (Large NOX 2) (Long NOX 2) Length = 1517 Score = 44.3 bits (103), Expect = 8e-05 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Frame = -3 Query: 300 SGTRVKTHFARPNWRNVYKRIALNHRE-QRVGVFYCGAPVLTKELRELAQDFSRKTNTKF 124 +G R THF RP + + H + ++GVF CG P +TK + + Q +R+ F Sbjct: 1451 TGLRSVTHFGRPPFELFLDSLQEVHPQVHKIGVFSCGPPGMTKNVEKACQLINRQDRAHF 1510 Query: 123 EFHKENF 103 H ENF Sbjct: 1511 VHHYENF 1517
>DUOX1_CAEEL (O61213) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (DUOX1)| (NADPH thyroid oxidase 1) (Blistered cuticle protein 3) Length = 1497 Score = 43.1 bits (100), Expect = 2e-04 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Frame = -3 Query: 300 SGTRVKTHFARPNWRNVYKRIALNHREQ-RVGVFYCGAPVLTKELRELAQDFSRKTNTKF 124 +G K HF RPN++ ++ I H+EQ ++GVF CG L + + E D +R+ + Sbjct: 1430 TGLHAKNHFGRPNFKAFFQFIQSEHKEQSKIGVFSCGPVNLNESIAEGCADANRQRDAPS 1489 Query: 123 EFHK 112 H+ Sbjct: 1490 FAHR 1493
>DUOX_DROME (Q9VQH2) Dual oxidase (EC 1.6.3.1) (EC 1.11.1.-)| Length = 1475 Score = 35.0 bits (79), Expect = 0.048 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%) Frame = -3 Query: 300 SGTRVKTHFARPNWRNVYKRIALNHRE-QRVGVFYCGAPVLTKELRELAQDFSRKTNTK- 127 +G + HF RP+ + K + H ++GVF CG LTK + + ++ Sbjct: 1407 TGLKAVNHFGRPDMSSFLKFVQKKHSYVSKIGVFSCGPRPLTKSVMSACDEVNKTRKLPY 1466 Query: 126 FEFHKENF 103 F H ENF Sbjct: 1467 FIHHFENF 1474
>ZN696_HUMAN (Q9H7X3) Zinc finger protein 696| Length = 374 Score = 29.6 bits (65), Expect = 2.0 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%) Frame = +3 Query: 189 VHRSRILRHA-VHGG*GRYACRRCANLVGQS 278 +H S ++RH H G YAC C GQS Sbjct: 163 IHSSHVVRHQRAHSGERPYACAECGKAFGQS 193
>XDH_BOVIN (P80457) Xanthine dehydrogenase/oxidase [Includes: Xanthine| dehydrogenase (EC 1.17.1.4) (XD); Xanthine oxidase (EC 1.17.3.2) (XO) (Xanthine oxidoreductase)] Length = 1331 Score = 29.3 bits (64), Expect = 2.6 Identities = 18/52 (34%), Positives = 28/52 (53%) Frame = -3 Query: 261 WRNVYKRIALNHREQRVGVFYCGAPVLTKELRELAQDFSRKTNTKFEFHKEN 106 W+N+YK L H QR+ F P E + +Q ++RK+ +F+KEN Sbjct: 942 WKNMYKEGDLTHFNQRLEGF--SVPRCWDECLKSSQYYARKSEVD-KFNKEN 990
>ZN587_HUMAN (Q96SQ5) Zinc finger protein 587| Length = 575 Score = 28.9 bits (63), Expect = 3.5 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = +3 Query: 198 SRILRHAVHGG*GRYACRRCANLVGQSGS 284 S I VH G G Y CR C GQ G+ Sbjct: 310 SLISHQLVHTGEGPYECRECGKSFGQKGN 338
>PRKDC_XENLA (Q9DEI1) DNA-dependent protein kinase catalytic subunit (EC 2.7.11.1)| (DNA-PK catalytic subunit) (DNA-PKcs) Length = 4146 Score = 28.1 bits (61), Expect = 5.9 Identities = 11/48 (22%), Positives = 25/48 (52%) Frame = +3 Query: 36 LLCTELTHFPQKELVAGLSTEVKNSPCGTRILCLSFSRNLVQAHAAPL 179 +LC + HF ++ + +K S C T+++ L+ N+ ++ + L Sbjct: 1787 ILCRDERHFMEELFQSSFKKVIKRSSCDTQVILLNTLHNMFKSESLML 1834
>NR1H2_RAT (Q62755) Oxysterols receptor LXR-beta (Liver X receptor beta)| (Nuclear orphan receptor LXR-beta) (Ubiquitously-expressed nuclear receptor) (UR) (Orphan nuclear receptor OR-1) Length = 446 Score = 27.7 bits (60), Expect = 7.7 Identities = 11/14 (78%), Positives = 11/14 (78%) Frame = +3 Query: 210 RHAVHGG*GRYACR 251 R VHGG GRYACR Sbjct: 104 RSVVHGGAGRYACR 117
>NR1H2_MOUSE (Q60644) Oxysterols receptor LXR-beta (Liver X receptor beta)| (Nuclear orphan receptor LXR-beta) (Ubiquitously-expressed nuclear receptor) (Retinoid X receptor-interacting protein No.15) Length = 446 Score = 27.7 bits (60), Expect = 7.7 Identities = 11/14 (78%), Positives = 11/14 (78%) Frame = +3 Query: 210 RHAVHGG*GRYACR 251 R VHGG GRYACR Sbjct: 104 RSVVHGGAGRYACR 117
>CID_DROME (P19538) Protein cubitus interruptus| Length = 1397 Score = 27.7 bits (60), Expect = 7.7 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -3 Query: 285 KTHFARPNWRNVYKRIALNHREQRVGVFYCGAPVLT 178 K H A P NV + IA NH ++ ++Y +LT Sbjct: 1104 KEHQAVPVGSNVSETIASNHYREQSNIYYTNKQILT 1139 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,447,622 Number of Sequences: 219361 Number of extensions: 809542 Number of successful extensions: 2750 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 2538 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2742 length of database: 80,573,946 effective HSP length: 76 effective length of database: 63,902,510 effective search space used: 1533660240 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
