>gb|AY109108.1| Zea mays PCO116815 mRNA sequence
          Length = 1041

 Score = 75.8 bits (38), Expect = 7e-11
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                       
Query: 194 tctagtttcttctcagcctcaccgatgacccgcagttgctcgaaaaaggcggtgagcttc 253
           |||| |||||||||||| |||| |||||||   |||||||| || || ||||||||||||
Sbjct: 801 tctaatttcttctcagcttcactgatgacctctagttgctccaacaaagcggtgagcttc 742

                                                 
Query: 254 ctcatgtcctcctcttggacactggggggagccttctc 291
           |||||||||||||| || || ||  | |||||||||||
Sbjct: 741 ctcatgtcctcctcctgtacgctctgtggagccttctc 704

>gb|AY112223.1| Zea mays CL3071_1 mRNA sequence
          Length = 1082

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                       
Query: 194 tctagtttcttctcagcctcaccgatgacccgcagttgctcgaaaaaggcggtgagcttc 253
           |||| |||||||||||| |||| |||||||   ||||| || || || ||||||||||| 
Sbjct: 446 tctaatttcttctcagcttcactgatgacctctagttgttccaacaaagcggtgagcttt 505

                         
Query: 254 ctcatgtcctcctc 267
           ||||||||||||||
Sbjct: 506 ctcatgtcctcctc 519

>gb|BT017806.1| Zea mays clone EL01N0506F04.c mRNA sequence
          Length = 1244

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                       
Query: 194 tctagtttcttctcagcctcaccgatgacccgcagttgctcgaaaaaggcggtgagcttc 253
           |||| |||||||||||| |||| |||||||   ||||| || || || |||| |||||| 
Sbjct: 953 tctaatttcttctcagcttcactgatgacctctagttgttccaacaaagcggggagcttt 894

                                                 
Query: 254 ctcatgtcctcctcttggacactggggggagccttctc 291
           |||||||||||||| || || ||  | |||||||||||
Sbjct: 893 ctcatgtcctcctcctgcacgctctgtggagccttctc 856

>ref|XM_469360.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3534

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 245  gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaacc 300
            ||||| || |||||||||||||| |||||| |  | |||||||||||| |||||||
Sbjct: 3092 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaacc 3037

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                        
Query: 245      gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaacc 300
                ||||| || |||||||||||||| |||||| |  | |||||||||||| |||||||
Sbjct: 27542742 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaacc 27542687



 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 191      gcatctagtttcttctcagcctcac 215
                |||||||||||||||||||| ||||
Sbjct: 12395727 gcatctagtttcttctcagcttcac 12395751

>gb|AC137998.2| Oryza sativa chromosome 3 BAC OSJNBa0010B01 genomic sequence, complete
             sequence
          Length = 27470

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                     
Query: 245   gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaacc 300
             ||||| || |||||||||||||| |||||| |  | |||||||||||| |||||||
Sbjct: 20032 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaacc 20087

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                        
Query: 245      gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaacc 300
                ||||| || |||||||||||||| |||||| |  | |||||||||||| |||||||
Sbjct: 27634065 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaacc 27634010



 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 191      gcatctagtttcttctcagcctcac 215
                |||||||||||||||||||| ||||
Sbjct: 12392490 gcatctagtttcttctcagcttcac 12392514

>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence,
            complete sequence
          Length = 123406

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                    
Query: 245  gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaacc 300
            ||||| || |||||||||||||| |||||| |  | |||||||||||| |||||||
Sbjct: 7772 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaacc 7827

>dbj|AK121157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079F18, full
            insert sequence
          Length = 3587

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                    
Query: 245  gtgagcttcctcatgtcctcctcttggacactggggggagccttctctctgtaacc 300
            ||||| || |||||||||||||| |||||| |  | |||||||||||| |||||||
Sbjct: 3304 gtgagttttctcatgtcctcctcctggacattctgtggagccttctctttgtaacc 3249

>gb|AC153930.2| Mus musculus 10 BAC RP24-461H14 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 186915

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 62     tttgaattttctataaatgtgacatca 88
              |||||| ||||||||||||||||||||
Sbjct: 132214 tttgaaatttctataaatgtgacatca 132188

>gb|AC146506.1| Solanum demissum chromosome 5 BAC PGEC989P08 genomic sequence, complete
             sequence
          Length = 121915

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 60    catttgaattttctataaatgt 81
             ||||||||||||||||||||||
Sbjct: 75708 catttgaattttctataaatgt 75687

>gb|AY730338.1| Solanum tuberosum strain P6/210 clone BAC BA47f2, complete sequence
          Length = 81567

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    atttgaattttctataaatgt 81
             |||||||||||||||||||||
Sbjct: 74176 atttgaattttctataaatgt 74196

>ref|XM_537383.2| PREDICTED: Canis familiaris similar to RING finger protein 31 (Zinc
            in-between-RING-finger ubiquitin-associated domain
            protein) (LOC480259), mRNA
          Length = 3490

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 210  cctcaccgatgacccgcagttgctc 234
            ||||||||||||| |||||||||||
Sbjct: 2442 cctcaccgatgacacgcagttgctc 2466

>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0098H14, complete sequence
          Length = 132560

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 191   gcatctagtttcttctcagcctcac 215
             |||||||||||||||||||| ||||
Sbjct: 54745 gcatctagtttcttctcagcttcac 54769

>dbj|AK100513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099P08, full
            insert sequence
          Length = 3639

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 191  gcatctagtttcttctcagcctcac 215
            |||||||||||||||||||| ||||
Sbjct: 3519 gcatctagtttcttctcagcttcac 3495

>emb|AL670175.12| Mouse DNA sequence from clone RP23-309K20 on chromosome 4, complete
              sequence
          Length = 168158

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 77     aatgtgacatcaccaccatcc 97
              |||||||||||||||||||||
Sbjct: 140982 aatgtgacatcaccaccatcc 141002

>gb|AC113122.9| Mus musculus chromosome 8, clone RP23-349P4, complete sequence
          Length = 203728

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 59    ccatttgaattttctataaa 78
             ||||||||||||||||||||
Sbjct: 23208 ccatttgaattttctataaa 23189

>emb|AL683828.8| Mouse DNA sequence from clone RP23-340H1 on chromosome 4 Contains the
             3' end of the Col27a1 gene for procollagen type XXVII
             alpha 1, the Orm1, Orm2 and Orm3 genes for orosomucoid 1,
             2 and 3, an orosomucoid pseudogene, the gene for a novel
             protein similar to human AT-hook protein AKNA, gene
             4933437N03Rik, the Whrn gene for whirlin and two CpG
             islands, complete sequence
          Length = 214370

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 247   gagcttcctcatgtcctcct 266
             ||||||||||||||||||||
Sbjct: 31754 gagcttcctcatgtcctcct 31735

>gb|AC105426.4| Homo sapiens BAC clone RP11-794N18 from 4, complete sequence
          Length = 55775

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   gcttcctcatgtcctcctct 268
             ||||||||||||||||||||
Sbjct: 23507 gcttcctcatgtcctcctct 23526

>ref|NM_079456.2| Drosophila melanogaster Soluble NSF attachment protein CG6625-RA
            (Snap), mRNA
          Length = 2069

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 65   gaattttctataaatgtgac 84
            ||||||||||||||||||||
Sbjct: 1762 gaattttctataaatgtgac 1743

>gb|AC009839.10| Drosophila melanogaster 3L BAC RP98-16G9 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 185918

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 65     gaattttctataaatgtgac 84
              ||||||||||||||||||||
Sbjct: 106242 gaattttctataaatgtgac 106223

>gb|AC093260.2| Homo sapiens chromosome 5 clone RP11-237B16, complete sequence
          Length = 168521

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 67   attttctataaatgtgacat 86
            ||||||||||||||||||||
Sbjct: 1961 attttctataaatgtgacat 1980

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 115     tatcaacttccaaacaaaaa 134
               ||||||||||||||||||||
Sbjct: 9829802 tatcaacttccaaacaaaaa 9829821

>gb|AC083783.8| Homo sapiens chromosome 17, clone RP11-462C21, complete sequence
          Length = 143516

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 64     tgaattttctataaatgtga 83
              ||||||||||||||||||||
Sbjct: 121095 tgaattttctataaatgtga 121076

>gb|AC092960.3| Homo sapiens 3 BAC RP11-393B14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172507

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     catttgaattttctataaat 79
              ||||||||||||||||||||
Sbjct: 161099 catttgaattttctataaat 161080

>gb|AC113368.3| Homo sapiens chromosome 5 clone RP11-116B13, complete sequence
          Length = 155354

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    attttctataaatgtgacat 86
             ||||||||||||||||||||
Sbjct: 23774 attttctataaatgtgacat 23793

>ref|XM_228548.3| PREDICTED: Rattus norvegicus similar to hypothetical protein
            6430402L03 (LOC302412), mRNA
          Length = 1632

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 250  cttcctcatgtcctcctctt 269
            ||||||||||||||||||||
Sbjct: 1005 cttcctcatgtcctcctctt 986

>gb|AY069477.1| Drosophila melanogaster LD21601 full insert cDNA
          Length = 2054

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 65   gaattttctataaatgtgac 84
            ||||||||||||||||||||
Sbjct: 1730 gaattttctataaatgtgac 1711

>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0456E06
          Length = 164353

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    tatcaacttccaaacaaaaa 134
              ||||||||||||||||||||
Sbjct: 120044 tatcaacttccaaacaaaaa 120063

>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0063H02
          Length = 152326

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   tatcaacttccaaacaaaaa 134
             ||||||||||||||||||||
Sbjct: 26437 tatcaacttccaaacaaaaa 26456

>emb|AL583742.2|CNS07EFV Human chromosome 14 DNA sequence BAC R-318A9 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 175584

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    atgtgacatcaccaccatcc 97
             ||||||||||||||||||||
Sbjct: 71007 atgtgacatcaccaccatcc 71026

>gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71 of 83 of the complete
              sequence
          Length = 299903

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 65     gaattttctataaatgtgac 84
              ||||||||||||||||||||
Sbjct: 288396 gaattttctataaatgtgac 288377

>gb|AC005291.1|AC005291 Homo sapiens chromosome 17, clone hRPK.401_O_9, complete sequence
          Length = 198582

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    tgaattttctataaatgtga 83
             ||||||||||||||||||||
Sbjct: 63377 tgaattttctataaatgtga 63358

>gb|U09374.1|DMU09374 Drosophila melanogaster soluble NSF attachment protein mRNA, complete
            cds
          Length = 2038

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 65   gaattttctataaatgtgac 84
            ||||||||||||||||||||
Sbjct: 1718 gaattttctataaatgtgac 1699

>emb|AL691423.14| Mouse DNA sequence from clone RP23-21D3 on chromosome 2, complete
              sequence
          Length = 216415

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 62     tttgaattttctataaatgt 81
              ||||||||||||||||||||
Sbjct: 104442 tttgaattttctataaatgt 104461


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,452,531
Number of Sequences: 3902068
Number of extensions: 3452531
Number of successful extensions: 62568
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62426
Number of HSP's gapped (non-prelim): 142
length of query: 305
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 283
effective length of database: 17,147,199,772
effective search space: 4852657535476
effective search space used: 4852657535476
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)