>S27A2_HUMAN (O14975) Very-long-chain acyl-CoA synthetase (EC 6.2.1.-) (VLCS)|
(Very-long-chain-fatty-acid-CoA ligase) (VLACS)
(THCA-CoA ligase) (Fatty-acid-coenzyme A ligase, very
long-chain 1) (Long-chain-fatty-acid--CoA ligase) (EC
6.2.1.3) (Fatty acid
Length = 620
Score = 24.6 bits (52), Expect(2) = 6.7
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 159 YNLLLAHINRLIRSHHKTKPATFF---FLGYISRTPHAKVYMVQD 284
Y L +A + R +RS+ + +PA FL +TPH + +D
Sbjct: 32 YFLKVAAVGRRVRSYGQRRPARTILRAFLEKARQTPHKPFLLFRD 76
Score = 21.6 bits (44), Expect(2) = 6.7
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +1
Query: 49 PYYISDIGYCISAA 90
PY+ DIGY + A
Sbjct: 24 PYFFQDIGYFLKVA 37
>ENGB_BUCAI (P57507) Probable GTP-binding protein engB|
Length = 205
Score = 27.3 bits (59), Expect = 9.0
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = -1
Query: 245 YVPKKEECSRFSLVMRSD*PIYVCQQKIIVLLVPDCCTIQPQLVLLSEC 99
Y+ K+E+ F L+M P+ QKII + V +I LVLL++C
Sbjct: 102 YLEKREQIKLFVLLMDIRYPLKKLDQKIISIAVQKKISI---LVLLTKC 147
Database: uniprot_sprot.fasta
Posted date: May 25, 2006 5:36 PM
Number of letters in database: 80,573,946
Number of sequences in database: 219,361
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,815,090
Number of Sequences: 219361
Number of extensions: 1094641
Number of successful extensions: 2592
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2592
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)