>FADB_SHEON (Q8EKR9) Fatty oxidation complex alpha subunit [Includes: Enoyl-CoA|
           hydratase (EC 4.2.1.17);
           Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC
           5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35);
           3-hydroxybutyryl-CoA epimerase (EC 5.1.2.
          Length = 716

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = +2

Query: 134 KPQLFC-MHLPNVVKEKPLLEEAKTSRNTAETL-HVLLISSQRMKTAI 271
           KP+ FC MH  N V + PL+E  +   ++ ET+  V+  +S+  KT I
Sbjct: 442 KPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAYASKMGKTPI 489

>MIPO1_HUMAN (Q8TD10) Mirror-image polydactyly gene 1 protein|
          Length = 442

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +3

Query: 48  ESLWATVDKNYNVMDHRH*KNTLETMGPQNLSCSACICQTSSKKNR 185
           ES++ T +K YNVM+HRH     E M P         CQ +S  ++
Sbjct: 74  ESVYCTTEK-YNVMEHRHNDMHYECMTP---------CQVTSDSDK 109

>SCN7A_HUMAN (Q01118) Sodium channel protein type 7 alpha subunit (Sodium|
           channel protein type VII alpha subunit) (Putative
           voltage-gated sodium channel alpha subunit Nax) (Sodium
           channel protein, cardiac and skeletal muscle
           alpha-subunit)
          Length = 1682

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = +1

Query: 163 KRRQRKTAIGGGKDV*KHCRNSPCSTHILTTYENSHSFYRPSRPK 297
           K  Q K+  GG K+  K   +S CST  +   E    FY   R K
Sbjct: 851 KEIQSKSGDGGSKEKIKQSSSSECSTVDIAISEEEEMFYGGERSK 895

>CCPR_YARLI (Q6C0Z6) Cytochrome c peroxidase, mitochondrial precursor (EC|
           1.11.1.5) (CCP)
          Length = 340

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = -1

Query: 162 GRCMQNN*GFGDPW--SPVYFFND 97
           GRC + N GF  PW  SP  F ND
Sbjct: 227 GRCHKQNSGFEGPWTFSPTMFTND 250

>GBB_SCHPO (Q10282) Guanine nucleotide-binding protein beta subunit|
          Length = 305

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 13/49 (26%), Positives = 21/49 (42%)
 Frame = -2

Query: 158 DACRTTEVLGTHGLQCIFLMTMVHNVVIFIYGGP*RFRNFWSLRKQYLC 12
           +  +   VL  H +  + L  +  N  +F+ GG  +    W LR  Y C
Sbjct: 135 EQAKAISVLKGHEMDIVSLDFLPSNPNLFVTGGCDKLAKLWDLRAAYCC 183

>FADB_VIBF1 (Q5E8X6) Fatty oxidation complex alpha subunit [Includes: Enoyl-CoA|
           hydratase (EC 4.2.1.17);
           Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC
           5.3.3.8); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35);
           3-hydroxybutyryl-CoA epimerase (EC 5.1.2.
          Length = 725

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +2

Query: 134 KPQLFC-MHLPNVVKEKPLLEEAKTSRNTAETL-HVLLISSQRMKTAI 271
           +P+ FC MH  N V   PL+E  +  + + +T+  V+  +SQ  KT I
Sbjct: 442 RPENFCGMHFFNPVHRMPLVEVIRGEKTSQQTIDRVVAYASQMGKTPI 489

>METK_MYCGE (P47293) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine|
           adenosyltransferase) (AdoMet synthetase) (MAT)
          Length = 383

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 5/31 (16%)
 Frame = -3

Query: 94  WSIT-----L*FLSTVAHSDSEIFGHYGNNI 17
           WSIT     L  L  V +SD  ++GH+GN++
Sbjct: 333 WSITKIIDKLKLLDFVKYSDYAVYGHFGNDL 363

>SYFB_WOLTR (Q5GSH5) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 792

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 170 VKEKPLLEEAKTSRNTAETLHVLLIS 247
           +KE+PL++  +   NT + L VL+IS
Sbjct: 480 IKEEPLIDNVEVEINTHDNLRVLMIS 505

>GAA1_YEAST (P39012) GPI transamidase component GAA1|
          Length = 614

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -1

Query: 231 WRVSAVFLDVFASSNSGFSLTTFGR 157
           WR+ +V L   A  NSG  +TTFGR
Sbjct: 298 WRIQSVTLK--AHGNSGHDITTFGR 320

>VGFR3_MOUSE (P35917) Vascular endothelial growth factor receptor 3 precursor|
           (EC 2.7.10.1) (VEGFR-3) (Tyrosine-protein kinase
           receptor FLT4)
          Length = 1363

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 112 HWRPWVPKTSVVLHASAKRRQR 177
           HWRPW P  +    +  +R+QR
Sbjct: 459 HWRPWTPCKTFAQRSLRRRQQR 480

>Y2654_BACSK (Q5WEM1) UPF0176 protein ABC2654|
          Length = 322

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 214 HCRNSPCSTHILTTYENSHSFYRPSRPKAQ 303
           +C N  C+  IL + EN H + R   P+ +
Sbjct: 260 NCANPECNKQILCSEENEHKYLRGCTPECR 289


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,343,365
Number of Sequences: 219361
Number of extensions: 1015405
Number of successful extensions: 2338
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2338
length of database: 80,573,946
effective HSP length: 89
effective length of database: 61,050,817
effective search space used: 1465219608
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)