>PPOX_MOUSE (P51175) Protoporphyrinogen oxidase (EC 1.3.3.4) (PPO)|
          Length = 477

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 145 IRTPPSRRLAPAEASCTHQQALGHWQALQA 234
           ++ PPS  L     +C  Q  +GHWQ L +
Sbjct: 403 LKEPPSHCLVHLHKNCIPQYTIGHWQKLDS 432

>BMP5_HUMAN (P22003) Bone morphogenetic protein 5 precursor (BMP-5)|
          Length = 454

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
 Frame = +3

Query: 30  SRVRYIFSPHFQPRRLKCT-TTRLT--DPAQAVLHDSFLASDSDSTLS 164
           +R  Y  SP+  PRR++ + TT LT   P  A LHD+   +D+D  +S
Sbjct: 112 ARKGYPASPNGYPRRIQLSRTTPLTTQSPPLASLHDTNFLNDADMVMS 159

>BAI3_HUMAN (O60242) Brain-specific angiogenesis inhibitor 3 precursor|
          Length = 1522

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 20/72 (27%), Positives = 24/72 (33%), Gaps = 8/72 (11%)
 Frame = +1

Query: 151 TPPSRRLAPAEASCTHQQAL--------GHWQALQA*PRCSRRCQXXXXXVSRTAPKISS 306
           TPP     P E   TH +          G WQ   +  +CS  C       SR     + 
Sbjct: 373 TPPQYGGRPCEGPETHHKPCNIALCPVDGQWQEWSSWSQCSVTCSNGTQQRSRQCTAAAH 432

Query: 307 GASCCSMRWHAS 342
           G S C   W  S
Sbjct: 433 GGSECRGPWAES 444

>BAI3_MOUSE (Q80ZF8) Brain-specific angiogenesis inhibitor 3 precursor|
          Length = 1522

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 20/72 (27%), Positives = 23/72 (31%), Gaps = 8/72 (11%)
 Frame = +1

Query: 151 TPPSRRLAPAEASCTHQQAL--------GHWQALQA*PRCSRRCQXXXXXVSRTAPKISS 306
           TPP     P E   TH +          G WQ   +   CS  C       SR     + 
Sbjct: 373 TPPQYGGRPCEGPETHHKPCNIALCPVDGQWQEWSSWSHCSVTCSNGTQQRSRQCTAAAH 432

Query: 307 GASCCSMRWHAS 342
           G S C   W  S
Sbjct: 433 GGSECRGPWAES 444

>TOP2_SCHPO (P08096) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)|
          Length = 1485

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -3

Query: 341  EACQRIEQHDAPEDIFGAVLETAAQAYWQRREH 243
            +A  RI+++D+ EDI     E   + Y +R+EH
Sbjct: 1033 DASGRIKKYDSVEDILTEFYEVRLRTYQRRKEH 1065

>PPOX_HUMAN (P50336) Protoporphyrinogen oxidase (EC 1.3.3.4) (PPO)|
          Length = 477

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 145 IRTPPSRRLAPAEASCTHQQALGHWQALQA 234
           ++  PS  L     +C  Q  LGHWQ L++
Sbjct: 403 LKEMPSHCLVHLHKNCIPQYTLGHWQKLES 432

>HSP78_CANAL (Q96UX5) Heat shock protein 78, mitochondrial precursor|
          Length = 812

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = +3

Query: 15  NYIQKSRVRYIFSPHFQPRRLKCTTTRLTDPAQAVLHDSFLASDSDSTLS 164
           +Y + SR++Y   P  Q +  + +   L   +  +LHDS  + D    +S
Sbjct: 421 DYARASRIQYASIPELQDKIQELSKNELAAKSSNLLHDSVTSEDIAGVIS 470

>PPOX_MACFA (Q60HD5) Protoporphyrinogen oxidase (EC 1.3.3.4) (PPO)|
          Length = 477

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 157 PSRRLAPAEASCTHQQALGHWQALQA 234
           PS  L     +C  Q  LGHWQ L++
Sbjct: 407 PSHCLVHLHKNCIPQYTLGHWQKLES 432


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,530,377
Number of Sequences: 219361
Number of extensions: 573388
Number of successful extensions: 1522
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1522
length of database: 80,573,946
effective HSP length: 91
effective length of database: 60,612,095
effective search space used: 1454690280
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)