>ESR2_MICUN (P57781) Estrogen receptor beta (ER-beta)|
          Length = 673

 Score = 31.2 bits (69), Expect = 0.69
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 105 STNWPQNRQPCVPNLTQLCPNIYIHTKSSSHS 200
           S  WP +  P +P+LT  CP   ++ + S H+
Sbjct: 99  SAFWPSHNHPTMPSLTLHCPESIVYNEPSPHA 130

>YG2A_YEAST (P53243) Putative 91.0 kDa zinc finger protein in SPT4-ROM1|
           intergenic region
          Length = 794

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 159 CPNIYIHTKSSSHSLRTELYFSASEEVDVILLINFFSFML 278
           C N+Y  +    +   TE   S +E+ DV  LI F+S ++
Sbjct: 242 CTNLYASSSKHDNDFDTEDILSQTEQHDVFALILFYSLLV 281

>MUTS_BACFN (Q5L7B7) DNA mismatch repair protein mutS|
          Length = 879

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -2

Query: 292 SGSDYSMKLKKLMSKITSTSSLAEKYNSV 206
           SG DY +K+++  S++T   SL   YNSV
Sbjct: 450 SGKDYLLKIQQRESELTGIPSLKIAYNSV 478

>MUTS_BACFR (Q64MG7) DNA mismatch repair protein mutS|
          Length = 862

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -2

Query: 292 SGSDYSMKLKKLMSKITSTSSLAEKYNSV 206
           SG DY +K+++  S++T   SL   YNSV
Sbjct: 433 SGKDYLLKIQQRESELTGIPSLKIAYNSV 461

>YAL1_EBV (P03229) Hypothetical protein BALF1|
          Length = 220

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -3

Query: 96  YQFWLKCGCVVGYRVYFAVQNLVVDH 19
           Y +W +   V+ Y V FAV+N + DH
Sbjct: 143 YDYWSRLRVVLCYTVVFAVRNYLDDH 168

>YRY4_CAEEL (Q09354) Hypothetical protein T15H9.4|
          Length = 431

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = +3

Query: 132 PCVPNLTQLCPNIYIHTKSSSHSLRTELYFSASEEVDVILLIN 260
           P  P   + CP   +  KS+++++   +YF  S    V +L++
Sbjct: 333 PTAPGSAEGCPPPLVKAKSTTNAIERSVYFPLSTTAAVAILVS 375

>L_PI2HT (P26676) Large structural protein (Protein L) (Transcriptase)|
            (Replicase) [Includes: RNA-directed RNA polymerase (EC
            2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC
            2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
          Length = 2262

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 213  IRCAVSESWILCVYIC*DIVESSWAHMAAD 124
            I+C   ESWIL   +     + SWA +AAD
Sbjct: 972  IKCGALESWILYNLLARKPGKGSWATLAAD 1001


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,372,044
Number of Sequences: 219361
Number of extensions: 793558
Number of successful extensions: 1956
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1956
length of database: 80,573,946
effective HSP length: 77
effective length of database: 63,683,149
effective search space used: 1528395576
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)