Clone Name | rbastl06b05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | VC19_VACCC (P21103) Protein C19/B25 | 28 | 4.7 |
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>VC19_VACCC (P21103) Protein C19/B25| Length = 259 Score = 28.5 bits (62), Expect = 4.7 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +2 Query: 95 HCYINKNGKR*EHCYKVSTNGQENTTPSVLK 187 HC +NK G HCY ++T PSVLK Sbjct: 97 HCDLNKRGNSPLHCYTMNT----RFNPSVLK 123 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,761,769 Number of Sequences: 219361 Number of extensions: 675160 Number of successful extensions: 1205 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 1197 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1205 length of database: 80,573,946 effective HSP length: 65 effective length of database: 66,315,481 effective search space used: 1591571544 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)