ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl06b05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1VC19_VACCC (P21103) Protein C19/B25 28 4.7

>VC19_VACCC (P21103) Protein C19/B25|
          Length = 259

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +2

Query: 95  HCYINKNGKR*EHCYKVSTNGQENTTPSVLK 187
           HC +NK G    HCY ++T       PSVLK
Sbjct: 97  HCDLNKRGNSPLHCYTMNT----RFNPSVLK 123


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,761,769
Number of Sequences: 219361
Number of extensions: 675160
Number of successful extensions: 1205
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 80,573,946
effective HSP length: 65
effective length of database: 66,315,481
effective search space used: 1591571544
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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