>gb|AC010635.6| Homo sapiens chromosome 5 clone CTD-2324F15, complete sequence
          Length = 81252

 Score = 46.1 bits (23), Expect = 0.058
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 195   gactttcagatcaacaagcagatgcggggag 225
             |||||||||||||||| ||||||| ||||||
Sbjct: 72541 gactttcagatcaacaggcagatgaggggag 72511

>ref|NM_125527.1| Arabidopsis thaliana unknown protein AT5G61340 mRNA, complete cds
          Length = 1114

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 228  atgtaattattacttatacaaa 249
            ||||||||||||||||||||||
Sbjct: 1072 atgtaattattacttatacaaa 1093

>gb|AY042805.2| Arabidopsis thaliana Unknown protein (MFB13.11) mRNA, complete cds
          Length = 1114

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 228  atgtaattattacttatacaaa 249
            ||||||||||||||||||||||
Sbjct: 1072 atgtaattattacttatacaaa 1093

>dbj|AB010073.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFB13
          Length = 80376

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 228   atgtaattattacttatacaaa 249
             ||||||||||||||||||||||
Sbjct: 32604 atgtaattattacttatacaaa 32583

>gb|AY809548.1| Schistosoma japonicum SJCHGC05584 protein mRNA, partial cds
          Length = 1380

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 249 atgaaatggccttctgatcat 269
           |||||||||||||||||||||
Sbjct: 529 atgaaatggccttctgatcat 509

>gb|AC103613.7| Mus musculus chromosome 14, clone RP24-75B12, complete sequence
          Length = 191158

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 231    taattattacttatacaaatgaaa 254
              |||||||| |||||||||||||||
Sbjct: 165285 taattatttcttatacaaatgaaa 165308

>gb|AC069292.12| Homo sapiens BAC clone RP11-648L18 from 7, complete sequence
          Length = 159624

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 224   agatatgtaattattactta 243
             ||||||||||||||||||||
Sbjct: 59606 agatatgtaattattactta 59587

>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 235     tattacttatacaaatgaaa 254
               ||||||||||||||||||||
Sbjct: 2329672 tattacttatacaaatgaaa 2329653

>emb|BX323087.9| Zebrafish DNA sequence from clone CH211-212J22 in linkage group 23,
             complete sequence
          Length = 192603

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   aactgttttggcaaagtcat 192
             ||||||||||||||||||||
Sbjct: 97528 aactgttttggcaaagtcat 97547

>ref|NM_001024867.1| Rattus norvegicus similar to DNA segment, Chr 8, ERATO Doi 531,
            expressed (MGC116266), mRNA
          Length = 1743

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 236  attacttatacaaatgaaat 255
            ||||||||||||||||||||
Sbjct: 1149 attacttatacaaatgaaat 1168

>gb|BC098069.1| Rattus norvegicus similar to DNA segment, Chr 8, ERATO Doi 531,
            expressed, mRNA (cDNA clone MGC:116266 IMAGE:7444656),
            complete cds
          Length = 1743

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 236  attacttatacaaatgaaat 255
            ||||||||||||||||||||
Sbjct: 1149 attacttatacaaatgaaat 1168

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 235      tattacttatacaaatgaaa 254
                ||||||||||||||||||||
Sbjct: 34931186 tattacttatacaaatgaaa 34931167

>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1293_E04
          Length = 118192

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   tattacttatacaaatgaaa 254
             ||||||||||||||||||||
Sbjct: 90683 tattacttatacaaatgaaa 90664

>emb|CR450834.5| Zebrafish DNA sequence from clone CH211-237B9 in linkage group 11,
             complete sequence
          Length = 137302

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   atatgtaattattacttata 245
             ||||||||||||||||||||
Sbjct: 55917 atatgtaattattacttata 55936

>gb|AC170600.2| Mus musculus BAC clone RP23-300L16 from chromosome 14, complete sequence
          Length = 216861

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 231    taattattacttatacaaatgaaa 254
              |||||||| |||||||||||||||
Sbjct: 115322 taattatttcttatacaaatgaaa 115345


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,462,626
Number of Sequences: 3902068
Number of extensions: 2462626
Number of successful extensions: 45288
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45238
Number of HSP's gapped (non-prelim): 50
length of query: 273
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 251
effective length of database: 17,147,199,772
effective search space: 4303947142772
effective search space used: 4303947142772
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)