Clone Name | rbastl06a12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | S6A18_HUMAN (Q96N87) Sodium- and chloride-dependent transporter ... | 30 | 2.1 |
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>S6A18_HUMAN (Q96N87) Sodium- and chloride-dependent transporter XTRP2 (Solute| carrier family 6 member 18) Length = 628 Score = 29.6 bits (65), Expect = 2.1 Identities = 16/61 (26%), Positives = 26/61 (42%) Frame = -1 Query: 217 IQRWCWSDEAIGQLCFVSYLHSTCIFPKENNVWDKCSHFWLG*IYSIHISLKFYMLMFVS 38 + RW + G +C V +L +TC + N +WL + SL ML F+ Sbjct: 435 LPRWVPKEALTGLVCLVCFLSATCFTLQSGN-------YWLEIFDNFAASLNLLMLAFLE 487 Query: 37 I 35 + Sbjct: 488 V 488 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,026,515 Number of Sequences: 219361 Number of extensions: 650598 Number of successful extensions: 1016 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 1006 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1016 length of database: 80,573,946 effective HSP length: 68 effective length of database: 65,657,398 effective search space used: 1575777552 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)