>MDC1_PIG (Q767L8) Mediator of DNA damage checkpoint protein 1|
          Length = 2042

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 16/35 (45%), Positives = 18/35 (51%)
 Frame = +3

Query: 180  RCCKKTSTASNPAPHGMTMSHATPKRSPRGLAYRS 284
            R   KT  AS P P   T    TPK + RG A+RS
Sbjct: 1347 RSSVKTPAASEPLPSASTDQPITPKPTSRGRAHRS 1381

>KCNAS_DROME (P08510) Potassium voltage-gated channel protein Shaker|
          Length = 655

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +3

Query: 51  PVHWYPID-DHN-CPRSELPVSRFLLD*MLETISSPPDLLLCDPMR 182
           P H+ PI  DH+ C R  + VS    +  L T++  PD LL DP R
Sbjct: 83  PQHFEPIPHDHDFCERVVINVSGLRFETQLRTLNQFPDTLLGDPAR 128

>OPR1_LYCES (Q9XG54) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase
           1) (LeOPR1)
          Length = 376

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
 Frame = +2

Query: 158 SPPLRSNALLQEDQHGQQPRSARYDNVPRDAEEV---------APWAGVQVGGAHARLVD 310
           +P +RSN +  +  H  +PR    D +P+   E          A + GV++ GAH  L+D
Sbjct: 138 TPQIRSNGI--DIAHFTRPRRLTTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLID 195

>KAZD1_MOUSE (Q8BJ66) Kazal-type serine protease inhibitor domain-containing|
           protein 1 precursor (IGFBP-related protein 10)
           (IGFBP-rP10) (Bone and odontoblast expressed protein 1)
          Length = 313

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 18/69 (26%), Positives = 25/69 (36%), Gaps = 11/69 (15%)
 Frame = -3

Query: 279 CTPAHGATSSASRGTLSYRAERGCWPCWSSC-----------SSALDRRGGDQVEMRWSL 133
           C P      +A RG L+ R    C  CW              S+    R G+Q+E R   
Sbjct: 60  CAPCRPKKCAAPRGCLAGRVRDACGCCWECANLEGQLCDLDPSANFYGRCGEQLECRLDA 119

Query: 132 ASSLAENEI 106
              L+  E+
Sbjct: 120 GGDLSRGEV 128

>NAGS_HUMAN (Q8N159) N-acetylglutamate synthase, mitochondrial precursor (EC|
           2.3.1.1) (Amino-acid acetyltransferase) [Contains:
           N-acetylglutamate synthase long form; N-acetylglutamate
           synthase short form; N-acetylglutamate synthase
           conserved domain form]
          Length = 534

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
 Frame = -3

Query: 318 GGRSTSRA*APPTCTPAHGATSSASRGTLSYRAERGCWPCWSSCSSALDRRGG--DQVEM 145
           GG S  RA A P    ++G   S     L +  E G  P          RR    D +E+
Sbjct: 219 GGGSVLRA-AEPAPHASYGGIVSVETDLLQWCLESGSIPILCPIGETAARRSVLLDSLEV 277

Query: 144 RWSLASSLAENEILVIQNVG 85
             SLA +L   +I+ + N G
Sbjct: 278 TASLAKALRPTKIIFLNNTG 297

>DXS_PROMA (Q7VC14) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7)|
           (1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
           (DXPS)
          Length = 643

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
 Frame = -1

Query: 401 LRSPSDLAVVLRGGHHDPGDASRV*CGEAAGLRA---EHELLRPVRQPTGRPLRRRVGHC 231
           L   SDL ++  G    P   + + C + +G+ A       LRP+ Q    PL RR+G  
Sbjct: 501 LSEGSDLLIIAYGSMVAPAQKTAL-CLKESGISATVINARFLRPLDQGLIHPLARRIGKV 559

Query: 230 HTVRSGVXXXXXXXXXAHWIAEEEI 156
            T+  G              A+++I
Sbjct: 560 VTMEEGTLLGGFGSAIVESFADQDI 584

>RAC2_CAVPO (O88931) Ras-related C3 botulinum toxin substrate 2 precursor|
           (p21-Rac2)
          Length = 192

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = +3

Query: 15  LLCFQAIH-SSFEPVH--WYPIDDHNCPRSEL 101
           L+CF  +  +S+E VH  WYP   H+CP + +
Sbjct: 79  LICFSLVSPASYENVHANWYPKVRHHCPSTPI 110

>PTPA2_GIBZE (Q4INW6) Serine/threonine-protein phosphatase 2A activator 2 (EC|
           5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-2)
           (PPIase PTPA-2) (Rotamase PTPA-2) (Phosphotyrosyl
           phosphatase activator 2)
          Length = 432

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 10/67 (14%)
 Frame = +3

Query: 189 KKTSTASNPAPHGMTMSHATPKR----------SPRGLAYRSEELMLGS*TCRLTTSYT* 338
           K+ S  SNP P   T +  TP            S R L+ +  ++ L S TC+L T++  
Sbjct: 37  KRRSGPSNPTPIPETPALPTPPDTSSNWTFKTPSRRILSKKDHDIFLSSPTCKLVTAWVF 96

Query: 339 GITRVMV 359
           G+   +V
Sbjct: 97  GLAESIV 103

>SUWA_DROME (P12297) Protein suppressor of white apricot|
          Length = 963

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 440 PAPSDHSERVPGGLRSPSDLAVVL 369
           P+  DHSE V GG R+P+ + + +
Sbjct: 306 PSADDHSEEVAGGRRNPNQVVITV 329

>NPD_ACTAC (Q9ZAB8) NAD-dependent deacetylase (EC 3.5.1.-) (Regulatory protein|
           SIR2 homolog)
          Length = 208

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -3

Query: 285 PTCTPAHGATSSASRGTLSYRAERGCW 205
           P C    GA  SA  G  +YRAE G W
Sbjct: 3   PICVVLSGAGISAESGIPTYRAEDGLW 29


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,415,206
Number of Sequences: 219361
Number of extensions: 1232741
Number of successful extensions: 3789
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3783
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)