ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl06a05 |
|---|---|
| Clone Library Name | barley_pub |
>NOX3_RAT (Q672K1) NADPH oxidase 3 (EC 1.6.3.-)| Length = 568 Score = 53.1 bits (126), Expect = 3e-07 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Frame = -3 Query: 442 GTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLRQLSADFTHK--TNTKF 269 G KT + RPNW FK++A NH + +GVF+CG + L+++ ++ F Sbjct: 502 GLKQKTFYGRPNWNEEFKQIAYNHPSSSIGVFFCGPKAMSKTLQKMCRLYSSSDPRGVHF 561 Query: 268 EFHKENF 248 ++KENF Sbjct: 562 YYNKENF 568
>CY24B_HUMAN (P04839) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 569 Score = 52.8 bits (125), Expect = 4e-07 Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Frame = -3 Query: 442 GTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQL--RQLSADFTHKTNTKF 269 G KT + RPNW + FK +A H N R+GVF CG L L + +S + F Sbjct: 503 GLKQKTLYGRPNWDNEFKTIASQHPNTRIGVFLCGPEALAETLSKQSISNSESGPRGVHF 562 Query: 268 EFHKENF 248 F+KENF Sbjct: 563 IFNKENF 569
>NOX3_HUMAN (Q9HBY0) NADPH oxidase 3 (EC 1.6.3.-) (gp91phox homolog 3) (GP91-3)| (Mitogenic oxidase 2) Length = 568 Score = 51.6 bits (122), Expect = 9e-07 Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 5/70 (7%) Frame = -3 Query: 442 GTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLRQL-----SADFTHKTN 278 G KT + RPNW + FK++A NH + +GVF+CG L L+++ SAD Sbjct: 502 GLKQKTFYGRPNWNNEFKQIAYNHPSSSIGVFFCGPKALSRTLQKMCHLYSSAD---PRG 558 Query: 277 TKFEFHKENF 248 F ++KE+F Sbjct: 559 VHFYYNKESF 568
>CY24B_BOVIN (O46522) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 570 Score = 51.2 bits (121), Expect = 1e-06 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Frame = -3 Query: 442 GTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLRQ--LSADFTHKTNTKF 269 G KT + RPNW + FK + H N R+GVF CG L L + +S + F Sbjct: 504 GLKQKTLYGRPNWDNEFKTIGSQHPNTRIGVFLCGPEALADTLNKQCISNSDSGPRGVHF 563 Query: 268 EFHKENF 248 F+KENF Sbjct: 564 IFNKENF 570
>CY24B_BISBI (Q95L74) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 570 Score = 51.2 bits (121), Expect = 1e-06 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Frame = -3 Query: 442 GTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLRQ--LSADFTHKTNTKF 269 G KT + RPNW + FK + H N R+GVF CG L L + +S + F Sbjct: 504 GLKQKTLYGRPNWDNEFKTIGSQHPNTRIGVFLCGPEALADTLNKQCISNSDSGPRGVHF 563 Query: 268 EFHKENF 248 F+KENF Sbjct: 564 IFNKENF 570
>NOX3_MOUSE (Q672J9) NADPH oxidase 3 (EC 1.6.3.-)| Length = 568 Score = 51.2 bits (121), Expect = 1e-06 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%) Frame = -3 Query: 442 GTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLRQLSADFT--HKTNTKF 269 G K + RPNW FK++A NH + +GVF+CG + L+++ ++ F Sbjct: 502 GLKQKAFYGRPNWNDEFKQIAYNHPSSSIGVFFCGSKAMSKTLQKMCRLYSSVDPRGVHF 561 Query: 268 EFHKENF 248 ++KENF Sbjct: 562 YYNKENF 568
>NOX1_RAT (Q9WV87) NADPH oxidase homolog 1 (NOX-1) (NOH-1) (NADH/NADPH| mitogenic oxidase subunit P65-MOX) (Mitogenic oxidase 1) (MOX1) Length = 563 Score = 50.8 bits (120), Expect = 1e-06 Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Frame = -3 Query: 442 GTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLRQLSADFT--HKTNTKF 269 G KT F RP W + F R+A H VGVF CG P L LR+ ++ +F Sbjct: 497 GLKQKTSFGRPMWDNEFSRIATAHPKSVVGVFLCGPPTLAKSLRKCCRRYSSLDPRKVQF 556 Query: 268 EFHKENF 248 F+KE F Sbjct: 557 YFNKETF 563
>CY24B_PIG (P52649) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 beta Length = 484 Score = 50.8 bits (120), Expect = 1e-06 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Frame = -3 Query: 442 GTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLRQ--LSADFTHKTNTKF 269 G KT + RPNW + FK +A H R+GVF CG L L + +S + F Sbjct: 418 GLKQKTLYGRPNWDNEFKTIASQHPTTRIGVFLCGPEALAETLNKQCISNSDSSPRGVHF 477 Query: 268 EFHKENF 248 F+KENF Sbjct: 478 IFNKENF 484
>CY24B_MOUSE (Q61093) Cytochrome b-245 heavy chain (p22 phagocyte B-cytochrome)| (Neutrophil cytochrome b 91 kDa polypeptide) (CGD91-phox) (gp91-phox) (gp91-1) (Heme-binding membrane glycoprotein gp91phox) (Cytochrome b(558) beta chain) (Cytochrome b558 be Length = 570 Score = 50.4 bits (119), Expect = 2e-06 Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Frame = -3 Query: 442 GTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQL--RQLSADFTHKTNTKF 269 G KT + RPNW + FK +A H N +GVF CG L L + +S + F Sbjct: 504 GLKQKTLYGRPNWDNEFKTIASEHPNTTIGVFLCGPEALAETLSKQSISNSESGPRGVHF 563 Query: 268 EFHKENF 248 F+KENF Sbjct: 564 IFNKENF 570
>NOX1_HUMAN (Q9Y5S8) NADPH oxidase homolog 1 (NOX-1) (NOH-1) (NADH/NADPH| mitogenic oxidase subunit P65-MOX) (Mitogenic oxidase 1) (MOX1) Length = 564 Score = 48.1 bits (113), Expect = 9e-06 Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Frame = -3 Query: 442 GTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLRQLSADFT--HKTNTKF 269 G KT F RP W + F +A +H VGVF CG L LR+ ++ +F Sbjct: 498 GLKQKTSFGRPMWDNEFSTIATSHPKSVVGVFLCGPRTLAKSLRKCCHRYSSLDPRKVQF 557 Query: 268 EFHKENF 248 F+KENF Sbjct: 558 YFNKENF 564
>NOX5_HUMAN (Q96PH1) NADPH oxidase 5 (EC 1.6.3.-)| Length = 765 Score = 41.6 bits (96), Expect = 9e-04 Identities = 23/65 (35%), Positives = 32/65 (49%) Frame = -3 Query: 442 GTSVKTHFARPNWRSVFKRVAVNHENQRVGVFYCGEPVLVPQLRQLSADFTHKTNTKFEF 263 G +T RP+W VF++VA + +V VF+CG P L L+ H F F Sbjct: 708 GLQTRTQPGRPDWSKVFQKVAAEKKG-KVQVFFCGSPALAKVLK------GHCEKFGFRF 760 Query: 262 HKENF 248 +ENF Sbjct: 761 FQENF 765
>DUOX1_CANFA (Q9MZF4) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH| thyroid oxidase 1) (Thyroid oxidase 1) Length = 1551 Score = 40.8 bits (94), Expect = 0.002 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = -3 Query: 427 THFARPNWRSVFKRVAVNHENQR-VGVFYCGEPVLVPQLRQLSADFTHKTNTKFEFHKEN 251 THF RP + FK + H R +GVF CG P + + + + T F H EN Sbjct: 1491 THFGRPPFEPFFKSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDRTHFSHHYEN 1550 Query: 250 F 248 F Sbjct: 1551 F 1551
>DUOX1_HUMAN (Q9NRD9) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH| thyroid oxidase 1) (Thyroid oxidase 1) (Large NOX 1) (Long NOX 1) Length = 1551 Score = 38.9 bits (89), Expect = 0.006 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Frame = -3 Query: 427 THFARPNWRSVFKRVAVNHENQR-VGVFYCGEPVLVPQLRQLSADFTHKTNTKFEFHKEN 251 THF RP + F + H R +GVF CG P + + + + T F H EN Sbjct: 1491 THFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDRTHFSHHYEN 1550 Query: 250 F 248 F Sbjct: 1551 F 1551
>DUOX1_PIG (Q8HZK3) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-)| Length = 1553 Score = 38.9 bits (89), Expect = 0.006 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Frame = -3 Query: 427 THFARPNWRSVFKRVAVNHENQR-VGVFYCGEPVLVPQLRQLSADFTHKTNTKFEFHKEN 251 THF RP + F + H R +GVF CG P + + + + T F H EN Sbjct: 1493 THFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDRTHFSHHYEN 1552 Query: 250 F 248 F Sbjct: 1553 F 1553
>DUOX1_RAT (Q8CIY2) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-)| Length = 1551 Score = 38.5 bits (88), Expect = 0.007 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Frame = -3 Query: 427 THFARPNWRSVFKRVAVNHENQR-VGVFYCGEPVLVPQLRQLSADFTHKTNTKFEFHKEN 251 THF RP + F + H R +GVF CG P + + + + T F H EN Sbjct: 1491 THFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINKQDRTHFSHHYEN 1550 Query: 250 F 248 F Sbjct: 1551 F 1551
>DUOX2_PIG (Q8HZK2) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-)| (NADH/NADPH thyroid oxidase p138-tox) Length = 1545 Score = 38.1 bits (87), Expect = 0.010 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Frame = -3 Query: 427 THFARPNWRSVFKRVAVNHENQR-VGVFYCGEPVLVPQLRQLSADFTHKTNTKFEFHKEN 251 THF RP + F + H R +GVF CG P + + + + T F H EN Sbjct: 1485 THFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKTCQLINRQDQTHFVHHYEN 1544 Query: 250 F 248 F Sbjct: 1545 F 1545
>DUOX1_CAEEL (O61213) Dual oxidase 1 precursor (EC 1.6.3.1) (EC 1.11.1.-) (DUOX1)| (NADPH thyroid oxidase 1) (Blistered cuticle protein 3) Length = 1497 Score = 38.1 bits (87), Expect = 0.010 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%) Frame = -3 Query: 442 GTSVKTHFARPNWRSVFKRVAVNHENQ-RVGVFYCGEPVLVPQLRQLSADFTHKTNTKFE 266 G K HF RPN+++ F+ + H+ Q ++GVF CG L + + AD + + Sbjct: 1431 GLHAKNHFGRPNFKAFFQFIQSEHKEQSKIGVFSCGPVNLNESIAEGCADANRQRDAPSF 1490 Query: 265 FHK 257 H+ Sbjct: 1491 AHR 1493
>DUOX2_HUMAN (Q9NRD8) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-) (NADPH| oxidase/peroxidase DUOX2) (NADPH thyroid oxidase 2) (Thyroid oxidase 2) (NADH/NADPH thyroid oxidase p138-tox) (p138 thyroid oxidase) (Large NOX 2) (Long NOX 2) Length = 1548 Score = 35.8 bits (81), Expect = 0.048 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Frame = -3 Query: 427 THFARPNWRSVFKRVAVNHENQR-VGVFYCGEPVLVPQLRQLSADFTHKTNTKFEFHKEN 251 THF RP + F + H R +GVF CG P + + + + F H EN Sbjct: 1488 THFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLVNRQDRAHFMHHYEN 1547 Query: 250 F 248 F Sbjct: 1548 F 1548
>SPY1_MOUSE (Q9QXV9) Sprouty homolog 1 (Spry-1)| Length = 313 Score = 33.1 bits (74), Expect = 0.31 Identities = 19/55 (34%), Positives = 23/55 (41%) Frame = -1 Query: 330 FLCRSCGSCRQISPTRQTQSLSFTRRTSSSVACIRICLCHASSGELYGLYYYFVK 166 F+C CG C+ + R S +AC R CLC A S YG VK Sbjct: 173 FICEQCGKCK-------CGECTAPRALPSCLACDRQCLCSAESMVEYGTCMCLVK 220
>SPY1_HUMAN (O43609) Sprouty homolog 1 (Spry-1)| Length = 319 Score = 33.1 bits (74), Expect = 0.31 Identities = 19/55 (34%), Positives = 23/55 (41%) Frame = -1 Query: 330 FLCRSCGSCRQISPTRQTQSLSFTRRTSSSVACIRICLCHASSGELYGLYYYFVK 166 F+C CG C+ + R S +AC R CLC A S YG VK Sbjct: 179 FICEQCGKCK-------CGECTAPRTLPSCLACNRQCLCSAESMVEYGTCMCLVK 226
>DUOX2_RAT (Q9ES45) Dual oxidase 2 precursor (EC 1.6.3.1) (EC 1.11.1.-)| (NADH/NADPH thyroid oxidase THOX2) (Thyroid oxidase 2) (Large NOX 2) (Long NOX 2) Length = 1517 Score = 32.7 bits (73), Expect = 0.41 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 1/61 (1%) Frame = -3 Query: 427 THFARPNWRSVFKRVAVNHEN-QRVGVFYCGEPVLVPQLRQLSADFTHKTNTKFEFHKEN 251 THF RP + + H ++GVF CG P + + + + F H EN Sbjct: 1457 THFGRPPFELFLDSLQEVHPQVHKIGVFSCGPPGMTKNVEKACQLINRQDRAHFVHHYEN 1516 Query: 250 F 248 F Sbjct: 1517 F 1517
>DUOX_DROME (Q9VQH2) Dual oxidase (EC 1.6.3.1) (EC 1.11.1.-)| Length = 1475 Score = 32.0 bits (71), Expect = 0.70 Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 3/68 (4%) Frame = -3 Query: 442 GTSVKTHFARPNWRSVFKRVAVNHEN-QRVGVFYCGEPVLVPQLRQLSADFTHKTN--TK 272 G HF RP+ S K V H ++GVF CG L + + D +KT Sbjct: 1408 GLKAVNHFGRPDMSSFLKFVQKKHSYVSKIGVFSCGPRPLTKSVMS-ACDEVNKTRKLPY 1466 Query: 271 FEFHKENF 248 F H ENF Sbjct: 1467 FIHHFENF 1474
>ENO_SCHJA (P33676) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 434 Score = 29.6 bits (65), Expect = 3.5 Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 1/46 (2%) Frame = -1 Query: 249 SSSVACIRICLCHASSGEL-YGLYYYFVKVGNKMGVVLPSPVFSLV 115 ++++ + + +C A + EL LY Y K+ V++P P F+++ Sbjct: 108 ANAILGVSLAVCKAGAAELNLPLYRYIAKLAGHKDVIMPVPAFNVI 153
>SPY3_HUMAN (O43610) Sprouty homolog 3 (Spry-3)| Length = 288 Score = 29.3 bits (64), Expect = 4.5 Identities = 19/56 (33%), Positives = 23/56 (41%) Frame = -1 Query: 333 LFLCRSCGSCRQISPTRQTQSLSFTRRTSSSVACIRICLCHASSGELYGLYYYFVK 166 LF+C CG C+ + T R S C + CLC A S YG VK Sbjct: 144 LFICEECGRCKCVPCTA-------ARPLPSCWLCNQRCLCSAESLLDYGTCLCCVK 192
>SP3AE_BACSU (P49782) Stage III sporulation protein AE| Length = 405 Score = 29.3 bits (64), Expect = 4.5 Identities = 13/29 (44%), Positives = 20/29 (68%) Frame = -3 Query: 106 VVKEYISVLGLGILFGYASFPCIQVLRLA 20 ++K + +LG+ IL A+FP I+VL LA Sbjct: 310 LLKNTVGILGVAILICIAAFPAIKVLSLA 338 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,299,460 Number of Sequences: 219361 Number of extensions: 1196274 Number of successful extensions: 2773 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 2739 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2768 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
