ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl06a05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009144.1| Triticum aestivum clone wl1n.pk0054.d8:fis, full ... 184 2e-43
2gb|AY603975.1| Oryza sativa (indica cultivar-group) respiratory ... 165 2e-37
3dbj|AK121916.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 2e-37
4dbj|AK099714.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 2e-37
5dbj|AK065117.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 2e-37
6dbj|AK060770.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 2e-37
7gb|AY107147.1| Zea mays PCO125081 mRNA sequence 155 1e-34
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
9dbj|AP003444.4| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
10dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
11ref|NM_202070.1| Arabidopsis thaliana ATRBOHB; calcium ion bindi... 56 1e-04
12ref|NM_100780.3| Arabidopsis thaliana ATRBOHB; calcium ion bindi... 56 1e-04
13emb|BX816700.1|CNS0ADX6 Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
14gb|BT005716.1| Arabidopsis thaliana clone RAFL14-97-K04 (R20129)... 56 1e-04
15gb|BT009119.1| Triticum aestivum clone wl1n.pk0005.c8:fis, full ... 52 0.002
16gb|BT009400.1| Triticum aestivum clone wlm96.pk044.g9:fis, full ... 46 0.097
17gb|AC121968.3| Mus musculus BAC clone RP24-272N4 from chromosome... 44 0.38
18dbj|AK039284.1| Mus musculus adult male spinal cord cDNA, RIKEN ... 44 0.38
19dbj|AK043600.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 44 0.38
20ref|XM_955172.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.5
21ref|XM_327389.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.5
22gb|AC183550.3| Pan troglodytes BAC clone CH251-48C10 from chromo... 42 1.5
23emb|BX842589.1| Chimp DNA sequence from clone bCH-61P22, complet... 42 1.5
24ref|XM_720557.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 42 1.5
25gb|AC146575.3| Medicago truncatula clone mth2-145m4, complete se... 42 1.5
26gb|AY320039.1| Homo sapiens KIR_wt47 long haplotype gene, comple... 42 1.5
27emb|AL133414.4| Human DNA sequence from clone RP5-1060P11 on chr... 42 1.5
28gb|AC155174.2| Pan troglodytes BAC clone CH251-396C20 from chrom... 42 1.5
29gb|AC158241.3| Pan troglodytes BAC clone CH251-351I22 from chrom... 42 1.5
30gb|AC100856.3| Homo sapiens chromosome 8, clone RP11-1001A23, co... 42 1.5
31gb|AC011501.8| Homo sapiens chromosome 19 clone CTB-61M7, comple... 42 1.5
32gb|AC006777.1| Caenorhabditis elegans cosmid Y46H3D, complete se... 40 6.0
33gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
34gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
35gb|CP000061.1| Aster yellows witches'-broom phytoplasma AYWB, co... 40 6.0
36gb|AC123837.5| Mus musculus BAC clone RP23-385F8 from chromosome... 40 6.0
37gb|AC146451.3| Pan troglodytes BAC clone RP43-1L21 from 7, compl... 40 6.0
38gb|AC161931.6| Mus musculus chromosome 3, clone RP23-290N20, com... 40 6.0
39gb|AC004020.1|HUAC004020 Homo sapiens Chromosome 16 BAC clone CI... 40 6.0
40ref|XM_721982.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 6.0
41gb|AC141112.7| Medicago truncatula clone mth2-15m12, complete se... 40 6.0
42gb|AC117452.2| Homo sapiens 3 BAC RP11-341J3 (Roswell Park Cance... 40 6.0
43gb|AC119729.5| Homo sapiens 3 BAC RP11-36I16 (Roswell Park Cance... 40 6.0
44gb|DQ378286.1| Drosophila virilis strain Tucson 15010-1001.10 fo... 40 6.0
45gb|AC116339.2| Homo sapiens chromosome 5 clone RP11-1006G2, comp... 40 6.0
46gb|AC093829.2| Homo sapiens BAC clone RP11-401E5 from 4, complet... 40 6.0
47gb|AC008835.6| Homo sapiens chromosome 5 clone CTD-2148E3, compl... 40 6.0
48gb|AC151986.4| Mus musculus BAC clone RP23-365E22 from chromosom... 40 6.0
49gb|AE006470.1| Chlorobium tepidum TLS, complete genome 40 6.0
50dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
51gb|AC012307.8| Homo sapiens BAC clone RP11-574O17 from 2, comple... 40 6.0
52gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
53dbj|AP006656.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 6.0 
>gb|BT009144.1| Triticum aestivum clone wl1n.pk0054.d8:fis, full insert mRNA
           sequence
          Length = 876

 Score =  184 bits (93), Expect = 2e-43
 Identities = 171/197 (86%)
 Strand = Plus / Minus

                                                                       
Query: 246 tagaagttctccttgtgaaactcaaactttgtgtttgtcttgtgggtgaaatctgccgac 305
           ||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| |||
Sbjct: 573 tagaagttctccttgtggaactcaaactttgtgttcgtcttgtgggtgaagtctgctgac 514

                                                                       
Query: 306 aactgccgcagctgcggcacaagaacaggctcaccacagtagaaaaccccgacacgctga 365
            ||||||| ||||| |||||||| ||||||||||| ||||||||||| || || || || 
Sbjct: 513 cactgccgtagctgtggcacaaggacaggctcaccgcagtagaaaactccaacgcgttgg 454

                                                                       
Query: 366 ttctcatggttgaccgcgacacgcttgaagacgcttcgccaattaggccgggcaaagtga 425
           ||||||||||| || || ||| | |||||||||||||||||||| || || || ||||| 
Sbjct: 453 ttctcatggttcactgcaacatgtttgaagacgcttcgccaattgggacgcgcgaagtgc 394

                            
Query: 426 gtcttgacgctggttcc 442
           |||||||| || |||||
Sbjct: 393 gtcttgacactagttcc 377
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>gb|AY603975.1| Oryza sativa (indica cultivar-group) respiratory burst oxidase
            protein B (rbohB) mRNA, complete cds
          Length = 3334

 Score =  165 bits (83), Expect = 2e-37
 Identities = 146/167 (87%)
 Strand = Plus / Minus

                                                                        
Query: 246  tagaagttctccttgtgaaactcaaactttgtgtttgtcttgtgggtgaaatctgccgac 305
            ||||||||||||||||| || |||||  |||||||||||||||||||||||||||| |||
Sbjct: 3012 tagaagttctccttgtggaaatcaaatcttgtgtttgtcttgtgggtgaaatctgctgac 2953

                                                                        
Query: 306  aactgccgcagctgcggcacaagaacaggctcaccacagtagaaaaccccgacacgctga 365
            |||||||  || || || || || |||||||||||||||||||| || ||||| ||||| 
Sbjct: 2952 aactgccttagttggggaaccagcacaggctcaccacagtagaacacaccgacgcgctgg 2893

                                                           
Query: 366  ttctcatggttgaccgcgacacgcttgaagacgcttcgccaattagg 412
            ||||||||| ||||||| ||   ||||||||||||||||||||||||
Sbjct: 2892 ttctcatggctgaccgcaaccttcttgaagacgcttcgccaattagg 2846
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>dbj|AK121916.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106C16, full
            insert sequence
          Length = 3255

 Score =  165 bits (83), Expect = 2e-37
 Identities = 146/167 (87%)
 Strand = Plus / Minus

                                                                        
Query: 246  tagaagttctccttgtgaaactcaaactttgtgtttgtcttgtgggtgaaatctgccgac 305
            ||||||||||||||||| || |||||  |||||||||||||||||||||||||||| |||
Sbjct: 3085 tagaagttctccttgtggaaatcaaatcttgtgtttgtcttgtgggtgaaatctgctgac 3026

                                                                        
Query: 306  aactgccgcagctgcggcacaagaacaggctcaccacagtagaaaaccccgacacgctga 365
            |||||||  || || || || || |||||||||||||||||||| || ||||| ||||| 
Sbjct: 3025 aactgccttagttggggaaccagcacaggctcaccacagtagaacacaccgacgcgctgg 2966

                                                           
Query: 366  ttctcatggttgaccgcgacacgcttgaagacgcttcgccaattagg 412
            ||||||||| ||||||| ||   ||||||||||||||||||||||||
Sbjct: 2965 ttctcatggctgaccgcaaccttcttgaagacgcttcgccaattagg 2919
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>dbj|AK099714.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084G19, full
            insert sequence
          Length = 3731

 Score =  165 bits (83), Expect = 2e-37
 Identities = 146/167 (87%)
 Strand = Plus / Minus

                                                                        
Query: 246  tagaagttctccttgtgaaactcaaactttgtgtttgtcttgtgggtgaaatctgccgac 305
            ||||||||||||||||| || |||||  |||||||||||||||||||||||||||| |||
Sbjct: 3604 tagaagttctccttgtggaaatcaaatcttgtgtttgtcttgtgggtgaaatctgctgac 3545

                                                                        
Query: 306  aactgccgcagctgcggcacaagaacaggctcaccacagtagaaaaccccgacacgctga 365
            |||||||  || || || || || |||||||||||||||||||| || ||||| ||||| 
Sbjct: 3544 aactgccttagttggggaaccagcacaggctcaccacagtagaacacaccgacgcgctgg 3485

                                                           
Query: 366  ttctcatggttgaccgcgacacgcttgaagacgcttcgccaattagg 412
            ||||||||| ||||||| ||   ||||||||||||||||||||||||
Sbjct: 3484 ttctcatggctgaccgcaaccttcttgaagacgcttcgccaattagg 3438
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>dbj|AK065117.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O12, full
            insert sequence
          Length = 3198

 Score =  165 bits (83), Expect = 2e-37
 Identities = 146/167 (87%)
 Strand = Plus / Minus

                                                                        
Query: 246  tagaagttctccttgtgaaactcaaactttgtgtttgtcttgtgggtgaaatctgccgac 305
            ||||||||||||||||| || |||||  |||||||||||||||||||||||||||| |||
Sbjct: 3088 tagaagttctccttgtggaaatcaaatcttgtgtttgtcttgtgggtgaaatctgctgac 3029

                                                                        
Query: 306  aactgccgcagctgcggcacaagaacaggctcaccacagtagaaaaccccgacacgctga 365
            |||||||  || || || || || |||||||||||||||||||| || ||||| ||||| 
Sbjct: 3028 aactgccttagttggggaaccagcacaggctcaccacagtagaacacaccgacgcgctgg 2969

                                                           
Query: 366  ttctcatggttgaccgcgacacgcttgaagacgcttcgccaattagg 412
            ||||||||| ||||||| ||   ||||||||||||||||||||||||
Sbjct: 2968 ttctcatggctgaccgcaaccttcttgaagacgcttcgccaattagg 2922
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>dbj|AK060770.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-B03, full
            insert sequence
          Length = 2978

 Score =  165 bits (83), Expect = 2e-37
 Identities = 146/167 (87%)
 Strand = Plus / Minus

                                                                        
Query: 246  tagaagttctccttgtgaaactcaaactttgtgtttgtcttgtgggtgaaatctgccgac 305
            ||||||||||||||||| || |||||  |||||||||||||||||||||||||||| |||
Sbjct: 2725 tagaagttctccttgtggaaatcaaatcttgtgtttgtcttgtgggtgaaatctgctgac 2666

                                                                        
Query: 306  aactgccgcagctgcggcacaagaacaggctcaccacagtagaaaaccccgacacgctga 365
            |||||||  || || || || || |||||||||||||||||||| || ||||| ||||| 
Sbjct: 2665 aactgccttagttggggaaccagcacaggctcaccacagtagaacacaccgacgcgctgg 2606

                                                           
Query: 366  ttctcatggttgaccgcgacacgcttgaagacgcttcgccaattagg 412
            ||||||||| ||||||| ||   ||||||||||||||||||||||||
Sbjct: 2605 ttctcatggctgaccgcaaccttcttgaagacgcttcgccaattagg 2559
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>gb|AY107147.1| Zea mays PCO125081 mRNA sequence
          Length = 938

 Score =  155 bits (78), Expect = 1e-34
 Identities = 165/194 (85%)
 Strand = Plus / Minus

                                                                       
Query: 249 aagttctccttgtgaaactcaaactttgtgtttgtcttgtgggtgaaatctgccgacaac 308
           |||||||||||||| ||||| ||||| || ||||||||||||||||| || || |||| |
Sbjct: 641 aagttctccttgtggaactcgaacttagtatttgtcttgtgggtgaagtccgctgacagc 582

                                                                       
Query: 309 tgccgcagctgcggcacaagaacaggctcaccacagtagaaaaccccgacacgctgattc 368
           ||||| ||||| |||||||| || |||||||||||||||||||| ||||  || || |||
Sbjct: 581 tgccgtagctgtggcacaaggacgggctcaccacagtagaaaactccgatgcgttggttc 522

                                                                       
Query: 369 tcatggttgaccgcgacacgcttgaagacgcttcgccaattaggccgggcaaagtgagtc 428
           || ||||| || || ||| | |||||||||||||||||||| ||||| ||||| || |||
Sbjct: 521 tcgtggttcactgcaacatgtttgaagacgcttcgccaattcggccgtgcaaaatgcgtc 462

                         
Query: 429 ttgacgctggttcc 442
           ||||| || |||||
Sbjct: 461 ttgacactagttcc 448
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  111 bits (56), Expect = 2e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                            
Query: 246      tagaagttctccttgtgaaactcaaactttgtgtttgtcttgtgggtgaaatctgccgac 305
                ||||||||||||||||| || |||||  |||||||||||||||||||||||||||| |||
Sbjct: 14604500 tagaagttctccttgtggaaatcaaatcttgtgtttgtcttgtgggtgaaatctgctgac 14604559

                                                            
Query: 306      aactgccgcagctgcggcacaagaacaggctcaccacagtagaa 349
                |||||||  || || || || || ||||||||||||||||||||
Sbjct: 14604560 aactgccttagttggggaaccagcacaggctcaccacagtagaa 14604603



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                           
Query: 354      ccgacacgctgattctcatggttgaccgcgacacgcttgaagacgcttcgccaattagg 412
                ||||| ||||| ||||||||| ||||||| ||   ||||||||||||||||||||||||
Sbjct: 14604691 ccgacgcgctggttctcatggctgaccgcaaccttcttgaagacgcttcgccaattagg 14604749
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>dbj|AP003444.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1164G11
          Length = 142699

 Score =  111 bits (56), Expect = 2e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                         
Query: 246   tagaagttctccttgtgaaactcaaactttgtgtttgtcttgtgggtgaaatctgccgac 305
             ||||||||||||||||| || |||||  |||||||||||||||||||||||||||| |||
Sbjct: 85877 tagaagttctccttgtggaaatcaaatcttgtgtttgtcttgtgggtgaaatctgctgac 85936

                                                         
Query: 306   aactgccgcagctgcggcacaagaacaggctcaccacagtagaa 349
             |||||||  || || || || || ||||||||||||||||||||
Sbjct: 85937 aactgccttagttggggaaccagcacaggctcaccacagtagaa 85980



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                        
Query: 354   ccgacacgctgattctcatggttgaccgcgacacgcttgaagacgcttcgccaattagg 412
             ||||| ||||| ||||||||| ||||||| ||   ||||||||||||||||||||||||
Sbjct: 86068 ccgacgcgctggttctcatggctgaccgcaaccttcttgaagacgcttcgccaattagg 86126
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>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0514H03
          Length = 167230

 Score =  111 bits (56), Expect = 2e-21
 Identities = 92/104 (88%)
 Strand = Plus / Plus

                                                                          
Query: 246    tagaagttctccttgtgaaactcaaactttgtgtttgtcttgtgggtgaaatctgccgac 305
              ||||||||||||||||| || |||||  |||||||||||||||||||||||||||| |||
Sbjct: 163813 tagaagttctccttgtggaaatcaaatcttgtgtttgtcttgtgggtgaaatctgctgac 163872

                                                          
Query: 306    aactgccgcagctgcggcacaagaacaggctcaccacagtagaa 349
              |||||||  || || || || || ||||||||||||||||||||
Sbjct: 163873 aactgccttagttggggaaccagcacaggctcaccacagtagaa 163916



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                         
Query: 354    ccgacacgctgattctcatggttgaccgcgacacgcttgaagacgcttcgccaattagg 412
              ||||| ||||| ||||||||| ||||||| ||   ||||||||||||||||||||||||
Sbjct: 164004 ccgacgcgctggttctcatggctgaccgcaaccttcttgaagacgcttcgccaattagg 164062
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>ref|NM_202070.1| Arabidopsis thaliana ATRBOHB; calcium ion binding / oxidoreductase
            AT1G09090 (ATRBOHB) transcript variant AT1G09090.2 mRNA,
            complete cds
          Length = 2627

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                        
Query: 338  accacagtagaaaaccccgacacgctgattctcatggttgaccgcgacacgcttgaagac 397
            |||||||||||||||||| || || |||||  | |||||||| |||||  ||||||||||
Sbjct: 2443 accacagtagaaaaccccaactcgttgattgacgtggttgactgcgacgtgcttgaagac 2384

                        
Query: 398  gcttcgccaatt 409
             || ||||||||
Sbjct: 2383 actacgccaatt 2372
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>ref|NM_100780.3| Arabidopsis thaliana ATRBOHB; calcium ion binding / oxidoreductase
            AT1G09090 (ATRBOHB) transcript variant AT1G09090.1 mRNA,
            complete cds
          Length = 2701

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                        
Query: 338  accacagtagaaaaccccgacacgctgattctcatggttgaccgcgacacgcttgaagac 397
            |||||||||||||||||| || || |||||  | |||||||| |||||  ||||||||||
Sbjct: 2517 accacagtagaaaaccccaactcgttgattgacgtggttgactgcgacgtgcttgaagac 2458

                        
Query: 398  gcttcgccaatt 409
             || ||||||||
Sbjct: 2457 actacgccaatt 2446
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>emb|BX816700.1|CNS0ADX6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH63ZH03 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2590

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                        
Query: 338  accacagtagaaaaccccgacacgctgattctcatggttgaccgcgacacgcttgaagac 397
            |||||||||||||||||| || || |||||  | |||||||| |||||  ||||||||||
Sbjct: 2426 accacagtagaaaaccccaactcgttgattgacgtggttgactgcgacgtgcttgaagac 2367

                        
Query: 398  gcttcgccaatt 409
             || ||||||||
Sbjct: 2366 actacgccaatt 2355
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>gb|BT005716.1| Arabidopsis thaliana clone RAFL14-97-K04 (R20129) putative
            respiratory burst oxidase protein B (At1g09090) mRNA,
            complete cds
          Length = 2721

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                        
Query: 338  accacagtagaaaaccccgacacgctgattctcatggttgaccgcgacacgcttgaagac 397
            |||||||||||||||||| || || |||||  | |||||||| |||||  ||||||||||
Sbjct: 2518 accacagtagaaaaccccaactcgttgattgacgtggttgactgcgacgtgcttgaagac 2459

                        
Query: 398  gcttcgccaatt 409
             || ||||||||
Sbjct: 2458 actacgccaatt 2447
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>gb|BT009119.1| Triticum aestivum clone wl1n.pk0005.c8:fis, full insert mRNA
           sequence
          Length = 543

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 245 ctagaagttctccttgtgaaactcaaactttgtgtttgtctt 286
           |||||||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 377 ctagaagttctccttgtggaactcgaacttggtgttggtctt 336
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>gb|BT009400.1| Triticum aestivum clone wlm96.pk044.g9:fis, full insert mRNA sequence
          Length = 1993

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 252  ttctccttgtgaaactcaaactttgtgtttgtctt 286
            ||||||||||| ||||| || ||||||||||||||
Sbjct: 1750 ttctccttgtggaactcgaattttgtgtttgtctt 1716
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>gb|AC121968.3| Mus musculus BAC clone RP24-272N4 from chromosome 6, complete sequence
          Length = 193207

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 269   aaactttgtgtttgtcttgtgg 290
             ||||||||||||||||||||||
Sbjct: 40211 aaactttgtgtttgtcttgtgg 40190
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>dbj|AK039284.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length
           enriched library, clone:A330015G07
           product:unclassifiable, full insert sequence
          Length = 2201

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 269 aaactttgtgtttgtcttgtgg 290
           ||||||||||||||||||||||
Sbjct: 508 aaactttgtgtttgtcttgtgg 487
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>dbj|AK043600.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length
           enriched library, clone:A830011K09
           product:unclassifiable, full insert sequence
          Length = 1791

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 269 aaactttgtgtttgtcttgtgg 290
           ||||||||||||||||||||||
Sbjct: 718 aaactttgtgtttgtcttgtgg 697
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>ref|XM_955172.1| Neurospora crassa OR74A hypothetical protein (NCU07104.1) partial
           mRNA
          Length = 648

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 297 tctgccgacaactgccgcagc 317
           |||||||||||||||||||||
Sbjct: 346 tctgccgacaactgccgcagc 366
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>ref|XM_327389.1| Neurospora crassa OR74A hypothetical protein (NCU07104.1) partial
           mRNA
          Length = 648

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 297 tctgccgacaactgccgcagc 317
           |||||||||||||||||||||
Sbjct: 346 tctgccgacaactgccgcagc 366
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>gb|AC183550.3| Pan troglodytes BAC clone CH251-48C10 from chromosome 7, complete
             sequence
          Length = 163417

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 151   cattttatttcccacctttac 171
             |||||||||||||||||||||
Sbjct: 52451 cattttatttcccacctttac 52431
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>emb|BX842589.1| Chimp DNA sequence from clone bCH-61P22, complete sequence
          Length = 201637

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 39    atacaaggaaaggaagcatag 59
             |||||||||||||||||||||
Sbjct: 96215 atacaaggaaaggaagcatag 96195
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>ref|XM_720557.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05218)
           partial mRNA
          Length = 1872

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 166 ctttacaaaataataatacaa 186
           |||||||||||||||||||||
Sbjct: 449 ctttacaaaataataatacaa 469
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>gb|AC146575.3| Medicago truncatula clone mth2-145m4, complete sequence
          Length = 117113

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 167   tttacaaaataataatacaac 187
             |||||||||||||||||||||
Sbjct: 35316 tttacaaaataataatacaac 35296
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>gb|AY320039.1| Homo sapiens KIR_wt47 long haplotype gene, complete sequence
          Length = 218963

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 39     atacaaggaaaggaagcatag 59
              |||||||||||||||||||||
Sbjct: 118962 atacaaggaaaggaagcatag 118942
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>emb|AL133414.4| Human DNA sequence from clone RP5-1060P11 on chromosome 19. Contains
             ESTs, STSs and GSSs. Contains 10 natural killer cell
             receptors, including the KIR2DL2, KIR2DL4, KIR2DS1 and
             KIR2DS2 genes for killer cell two domain long cytoplasmic
             tail immunoglobulin-like receptor 2 and 4 and and short
             cytoplasmic tail immunoglobulin-like receptor 1 and 2 and
             the KIR3DL2 and KIR3DS1 genes for killer cell three domain
             short cytoplasmic tail immunoglobulin-like receptor 2 and
             short cytoplasmic tail immunoglobulin-like receptor 1,
             complete sequence
          Length = 159169

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 39    atacaaggaaaggaagcatag 59
             |||||||||||||||||||||
Sbjct: 50011 atacaaggaaaggaagcatag 49991
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>gb|AC155174.2| Pan troglodytes BAC clone CH251-396C20 from chromosome unknown,
             complete sequence
          Length = 185465

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 39    atacaaggaaaggaagcatag 59
             |||||||||||||||||||||
Sbjct: 63446 atacaaggaaaggaagcatag 63466
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>gb|AC158241.3| Pan troglodytes BAC clone CH251-351I22 from chromosome unknown,
             complete sequence
          Length = 218497

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 39    atacaaggaaaggaagcatag 59
             |||||||||||||||||||||
Sbjct: 60531 atacaaggaaaggaagcatag 60511
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>gb|AC100856.3| Homo sapiens chromosome 8, clone RP11-1001A23, complete sequence
          Length = 182933

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 99     ttaacaacatagagtaaacaa 119
              |||||||||||||||||||||
Sbjct: 101357 ttaacaacatagagtaaacaa 101337
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>gb|AC011501.8| Homo sapiens chromosome 19 clone CTB-61M7, complete sequence
          Length = 161218

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 39    atacaaggaaaggaagcatag 59
             |||||||||||||||||||||
Sbjct: 47580 atacaaggaaaggaagcatag 47560
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>gb|AC006777.1| Caenorhabditis elegans cosmid Y46H3D, complete sequence
          Length = 27089

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   ggcaaaaccactcccatttt 156
             ||||||||||||||||||||
Sbjct: 19971 ggcaaaaccactcccatttt 19990
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>gb|AC136009.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0025K21,
              complete sequence
          Length = 146539

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    attttatttcccacctttac 171
              ||||||||||||||||||||
Sbjct: 130982 attttatttcccacctttac 130963
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>gb|AC150202.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1024A10,
              complete sequence
          Length = 157609

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    attttatttcccacctttac 171
              ||||||||||||||||||||
Sbjct: 156975 attttatttcccacctttac 156956
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>gb|CP000061.1| Aster yellows witches'-broom phytoplasma AYWB, complete genome
          Length = 706569

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 167    tttacaaaataataatacaa 186
              ||||||||||||||||||||
Sbjct: 534673 tttacaaaataataatacaa 534654
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>gb|AC123837.5| Mus musculus BAC clone RP23-385F8 from chromosome 7, complete sequence
          Length = 208880

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 265   actcaaactttgtgtttgtcttgt 288
             ||||||| ||||||||||||||||
Sbjct: 64986 actcaaattttgtgtttgtcttgt 64963
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>gb|AC146451.3| Pan troglodytes BAC clone RP43-1L21 from 7, complete sequence
          Length = 161524

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 180  aatacaacccatacaattca 199
            ||||||||||||||||||||
Sbjct: 8205 aatacaacccatacaattca 8224
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>gb|AC161931.6| Mus musculus chromosome 3, clone RP23-290N20, complete sequence
          Length = 186062

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    atactccttaacaacataga 111
             ||||||||||||||||||||
Sbjct: 98600 atactccttaacaacataga 98581
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>gb|AC004020.1|HUAC004020 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-319E8, complete sequence
          Length = 153773

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 160    tcccacctttacaaaataataata 183
              |||||||| |||||||||||||||
Sbjct: 143029 tcccacctatacaaaataataata 143052
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>ref|XM_721982.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY06423)
            partial mRNA
          Length = 4384

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 216  atagacatattcttatacaa 235
            ||||||||||||||||||||
Sbjct: 3131 atagacatattcttatacaa 3150
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>gb|AC141112.7| Medicago truncatula clone mth2-15m12, complete sequence
          Length = 135248

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   tgaagcatggcatagacata 224
             ||||||||||||||||||||
Sbjct: 73693 tgaagcatggcatagacata 73674
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>gb|AC117452.2| Homo sapiens 3 BAC RP11-341J3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 193285

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 194    aattcacctgatgaagcatg 213
              ||||||||||||||||||||
Sbjct: 142279 aattcacctgatgaagcatg 142260
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>gb|AC119729.5| Homo sapiens 3 BAC RP11-36I16 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 125847

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 194  aattcacctgatgaagcatg 213
            ||||||||||||||||||||
Sbjct: 1357 aattcacctgatgaagcatg 1338
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>gb|DQ378286.1| Drosophila virilis strain Tucson 15010-1001.10 fosmids 22L1 and
            42E12, complete sequence
          Length = 68774

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 348  aaaaccccgacacgctgatt 367
            ||||||||||||||||||||
Sbjct: 2488 aaaaccccgacacgctgatt 2507
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>gb|AC116339.2| Homo sapiens chromosome 5 clone RP11-1006G2, complete sequence
          Length = 74705

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 180   aatacaacccatacaattca 199
             ||||||||||||||||||||
Sbjct: 18762 aatacaacccatacaattca 18743
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>gb|AC093829.2| Homo sapiens BAC clone RP11-401E5 from 4, complete sequence
          Length = 169483

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    cacctttacaaaataataat 182
              ||||||||||||||||||||
Sbjct: 144467 cacctttacaaaataataat 144448
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>gb|AC008835.6| Homo sapiens chromosome 5 clone CTD-2148E3, complete sequence
          Length = 129046

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 180    aatacaacccatacaattca 199
              ||||||||||||||||||||
Sbjct: 116603 aatacaacccatacaattca 116584
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>gb|AC151986.4| Mus musculus BAC clone RP23-365E22 from chromosome 7, complete sequence
          Length = 199337

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 265   actcaaactttgtgtttgtcttgt 288
             ||||||| ||||||||||||||||
Sbjct: 73105 actcaaattttgtgtttgtcttgt 73128
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>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 378     accgcgacacgcttgaagac 397
               ||||||||||||||||||||
Sbjct: 1729469 accgcgacacgcttgaagac 1729450
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 152      attttatttcccacctttac 171
                ||||||||||||||||||||
Sbjct: 17402200 attttatttcccacctttac 17402181
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>gb|AC012307.8| Homo sapiens BAC clone RP11-574O17 from 2, complete sequence
          Length = 145918

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 160    tcccacctttacaaaataataata 183
              |||||||| |||||||||||||||
Sbjct: 108062 tcccacctatacaaaataataata 108039
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 152      attttatttcccacctttac 171
                ||||||||||||||||||||
Sbjct: 17495910 attttatttcccacctttac 17495891
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>dbj|AP006656.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT05H03, TM0342a,
             complete sequence
          Length = 57652

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 246   tagaagttctccttgtgaaa 265
             ||||||||||||||||||||
Sbjct: 34235 tagaagttctccttgtgaaa 34216


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,582,610
Number of Sequences: 3902068
Number of extensions: 4582610
Number of successful extensions: 88654
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88450
Number of HSP's gapped (non-prelim): 204
length of query: 444
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 422
effective length of database: 17,147,199,772
effective search space: 7236118303784
effective search space used: 7236118303784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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